RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 C1QTNF7Q9BXJ2 289 aa16.01■□□□□ 0.15
SNCA-205ENST00000394991 OSBPL1AQ9BXW6 950 aa16.01■□□□□ 0.15
SNCA-205ENST00000394991 SLC25A18Q9H1K4 315 aa16.01■□□□□ 0.15
SNCA-205ENST00000394991 GEMIN8Q9NWZ8 242 aaKnown RBP16.01■□□□□ 0.15
SNCA-205ENST00000394991 SEPT10Q9P0V9 454 aa16.01■□□□□ 0.15
SNCA-205ENST00000394991 APEX2Q9UBZ4 518 aa16.01■□□□□ 0.15
SNCA-205ENST00000394991 COQ6Q9Y2Z9 468 aa16.01■□□□□ 0.15
SNCA-205ENST00000394991 PAXBP1Q9Y5B6 917 aa16.01■□□□□ 0.15
SNCA-205ENST00000394991 USP9XQ93008 2570 aaPredicted RBP16.01■□□□□ 0.15
SNCA-205ENST00000394991 CXorf51AA0A1B0GTR3 108 aa16■□□□□ 0.15
SNCA-205ENST00000394991 BICDL2A1A5D9 508 aa16■□□□□ 0.15
SNCA-205ENST00000394991 POP4O95707 220 aaKnown RBP16■□□□□ 0.15
SNCA-205ENST00000394991 CTSEP14091 401 aa16■□□□□ 0.15
SNCA-205ENST00000394991 CLCN1P35523 988 aa16■□□□□ 0.15
SNCA-205ENST00000394991 KRT9P35527 623 aa16■□□□□ 0.15
SNCA-205ENST00000394991 PEX5P50542 639 aa16■□□□□ 0.15
SNCA-205ENST00000394991 MAPK10P53779 464 aa16■□□□□ 0.15
SNCA-205ENST00000394991 SNX16P57768 344 aa16■□□□□ 0.15
SNCA-205ENST00000394991 SNRPD1P62314 119 aaKnown RBP16■□□□□ 0.15
SNCA-205ENST00000394991 PTK2Q05397 1052 aa16■□□□□ 0.15
SNCA-205ENST00000394991 NFATC4Q14934 902 aa16■□□□□ 0.15
SNCA-205ENST00000394991 POLD3Q15054 466 aaPredicted RBP16■□□□□ 0.15
SNCA-205ENST00000394991 RAB6CQ53S08 254 aa16■□□□□ 0.15
SNCA-205ENST00000394991 FAM102AQ5T9C2 384 aaPredicted RBP16■□□□□ 0.15
SNCA-205ENST00000394991 MANEALQ5VSG8 457 aa16■□□□□ 0.15
SNCA-205ENST00000394991 ENPP7Q6UWV6 458 aa16■□□□□ 0.15
SNCA-205ENST00000394991 GDPD4Q6W3E5 623 aa16■□□□□ 0.15
SNCA-205ENST00000394991 RD3Q7Z3Z2 195 aa16■□□□□ 0.15
SNCA-205ENST00000394991 GKN2Q86XP6 184 aa16■□□□□ 0.15
SNCA-205ENST00000394991 XYLT1Q86Y38 959 aa16■□□□□ 0.15
SNCA-205ENST00000394991 SLITRK4Q8IW52 837 aa16■□□□□ 0.15
SNCA-205ENST00000394991 PDXPQ96GD0 296 aa16■□□□□ 0.15
SNCA-205ENST00000394991 FAM81BQ96LP2 452 aa16■□□□□ 0.15
SNCA-205ENST00000394991 CFAP57Q96MR6 1250 aa16■□□□□ 0.15
SNCA-205ENST00000394991 TIGD1Q96MW7 591 aa16■□□□□ 0.15
SNCA-205ENST00000394991 RAB6CQ9H0N0 254 aa16■□□□□ 0.15
SNCA-205ENST00000394991 PPARGC1AQ9UBK2 798 aaKnown RBP16■□□□□ 0.15
SNCA-205ENST00000394991 NEU3Q9UQ49 428 aa16■□□□□ 0.15
SNCA-205ENST00000394991 ATP6V1DQ9Y5K8 247 aa16■□□□□ 0.15
SNCA-205ENST00000394991 TIMP2P16035 220 aa15.99■□□□□ 0.15
SNCA-205ENST00000394991 SCNN1AP37088 669 aa15.99■□□□□ 0.15
SNCA-205ENST00000394991 GABRB2P47870 512 aa15.99■□□□□ 0.15
SNCA-205ENST00000394991 SRP54P61011 504 aaKnown RBP15.99■□□□□ 0.15
SNCA-205ENST00000394991 C2CD6Q53TS8 623 aa15.99■□□□□ 0.15
SNCA-205ENST00000394991 SPRED1Q7Z699 444 aa15.99■□□□□ 0.15
SNCA-205ENST00000394991 NLRP14Q86W24 1093 aa15.99■□□□□ 0.15
SNCA-205ENST00000394991 PTRH1Q86Y79 214 aaKnown RBP15.99■□□□□ 0.15
SNCA-205ENST00000394991 ZSCAN1Q8NBB4 408 aa15.99■□□□□ 0.15
SNCA-205ENST00000394991 NETO2Q8NC67 525 aa15.99■□□□□ 0.15
SNCA-205ENST00000394991 OR6C4Q8NGE1 309 aa15.99■□□□□ 0.15
SNCA-205ENST00000394991 SLC12A9Q9BXP2 914 aa15.99■□□□□ 0.15
SNCA-205ENST00000394991 EPN3Q9H201 632 aa15.99■□□□□ 0.15
SNCA-205ENST00000394991 SIX2Q9NPC8 291 aa15.99■□□□□ 0.15
SNCA-205ENST00000394991 DNAI1Q9UI46 699 aa15.99■□□□□ 0.15
SNCA-205ENST00000394991 APPL1Q9UKG1 709 aa15.99■□□□□ 0.15
SNCA-205ENST00000394991 RNF215Q9Y6U7 377 aa15.99■□□□□ 0.15
SNCA-205ENST00000394991 SPTBN1Q01082 2364 aaKnown RBP15.99■□□□□ 0.15
SNCA-205ENST00000394991 A0A1W2PQC6 194 aa15.98■□□□□ 0.15
SNCA-205ENST00000394991 FOXN3O00409 490 aaPredicted RBP15.98■□□□□ 0.15
SNCA-205ENST00000394991 NTRK1P04629 796 aa15.98■□□□□ 0.15
SNCA-205ENST00000394991 CDH5P33151 784 aaPredicted RBP15.98■□□□□ 0.15
SNCA-205ENST00000394991 ETFBP38117 255 aa15.98■□□□□ 0.15
SNCA-205ENST00000394991 PAK1Q13153 545 aa15.98■□□□□ 0.15
SNCA-205ENST00000394991 MORC3Q14149 939 aa15.98■□□□□ 0.15
SNCA-205ENST00000394991 UBAP2LQ14157 1087 aaKnown RBP15.98■□□□□ 0.15
SNCA-205ENST00000394991 C16orf72Q14CZ0 275 aa15.98■□□□□ 0.15
SNCA-205ENST00000394991 LRRC14Q15048 493 aa15.98■□□□□ 0.15
SNCA-205ENST00000394991 SKIDA1Q1XH10 827 aa15.98■□□□□ 0.15
SNCA-205ENST00000394991 TMEM52BQ4KMG9 183 aa15.98■□□□□ 0.15
SNCA-205ENST00000394991 CERCAMQ5T4B2 595 aa15.98■□□□□ 0.15
SNCA-205ENST00000394991 ZNF564Q8TBZ8 553 aaPredicted RBP15.98■□□□□ 0.15
SNCA-205ENST00000394991 JPH3Q8WXH2 748 aaPredicted RBP15.98■□□□□ 0.15
SNCA-205ENST00000394991 TMEM159Q96B96 161 aa15.98■□□□□ 0.15
SNCA-205ENST00000394991 RBM15Q96T37 977 aaKnown RBP eCLIP15.98■□□□□ 0.15
SNCA-205ENST00000394991 APOOQ9BUR5 198 aa15.98■□□□□ 0.15
SNCA-205ENST00000394991 MAGEB5Q9BZ81 275 aa15.98■□□□□ 0.15
SNCA-205ENST00000394991 SEMA6CQ9H3T2 930 aa15.98■□□□□ 0.15
SNCA-205ENST00000394991 KLQ9UEF7 1012 aa15.98■□□□□ 0.15
SNCA-205ENST00000394991 TMEM59LQ9UK28 342 aa15.98■□□□□ 0.15
SNCA-205ENST00000394991 OR1A2Q9Y585 309 aa15.98■□□□□ 0.15
SNCA-205ENST00000394991 TMEM110-MUSTN1A8MSY1 372 aa15.97■□□□□ 0.15
SNCA-205ENST00000394991 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.97■□□□□ 0.15
SNCA-205ENST00000394991 FAM72CH0Y354 149 aa15.97■□□□□ 0.15
SNCA-205ENST00000394991 GOLGA8SH3BPF8 625 aa15.97■□□□□ 0.15
SNCA-205ENST00000394991 BIN1O00499 593 aa15.97■□□□□ 0.15
SNCA-205ENST00000394991 INSIG1O15503 277 aa15.97■□□□□ 0.15
SNCA-205ENST00000394991 TMCC1O94876 653 aa15.97■□□□□ 0.15
SNCA-205ENST00000394991 GLB1P16278 677 aa15.97■□□□□ 0.15
SNCA-205ENST00000394991 PON1P27169 355 aa15.97■□□□□ 0.15
SNCA-205ENST00000394991 MAPKAPK2P49137 400 aa15.97■□□□□ 0.15
SNCA-205ENST00000394991 ARSDP51689 593 aa15.97■□□□□ 0.15
SNCA-205ENST00000394991 GEMIN4P57678 1058 aaKnown RBP15.97■□□□□ 0.15
SNCA-205ENST00000394991 INPP5AQ14642 412 aa15.97■□□□□ 0.15
SNCA-205ENST00000394991 PHF19Q5T6S3 580 aa15.97■□□□□ 0.15
SNCA-205ENST00000394991 FAM72AQ5TYM5 149 aa15.97■□□□□ 0.15
SNCA-205ENST00000394991 FAM72DQ6L9T8 149 aa15.97■□□□□ 0.15
SNCA-205ENST00000394991 OGFOD3Q6PK18 319 aa15.97■□□□□ 0.15
SNCA-205ENST00000394991 GBP6Q6ZN66 633 aa15.97■□□□□ 0.15
SNCA-205ENST00000394991 FAM72BQ86X60 149 aa15.97■□□□□ 0.15
SNCA-205ENST00000394991 OR1E3Q8WZA6 343 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms