RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 ATXN7L1Q9ULK2 861 aaPredicted RBP21.37■■□□□ 1.01
TRAF4-203ENST00000394925 COQ6Q9Y2Z9 468 aa21.37■■□□□ 1.01
TRAF4-203ENST00000394925 LRRK1Q38SD2 2015 aa21.36■■□□□ 1.01
TRAF4-203ENST00000394925 KDELR3O43731 214 aa21.36■■□□□ 1.01
TRAF4-203ENST00000394925 ALPIP09923 528 aa21.36■■□□□ 1.01
TRAF4-203ENST00000394925 UGT1A5P35504 534 aa21.36■■□□□ 1.01
TRAF4-203ENST00000394925 HK3P52790 923 aa21.36■■□□□ 1.01
TRAF4-203ENST00000394925 BECN1Q14457 450 aa21.36■■□□□ 1.01
TRAF4-203ENST00000394925 ALG11Q2TAA5 492 aa21.36■■□□□ 1.01
TRAF4-203ENST00000394925 CCDC14Q49A88 953 aa21.36■■□□□ 1.01
TRAF4-203ENST00000394925 HSP90AA4PQ58FG1 418 aa21.36■■□□□ 1.01
TRAF4-203ENST00000394925 MIIPQ5JXC2 388 aa21.36■■□□□ 1.01
TRAF4-203ENST00000394925 RD3Q7Z3Z2 195 aa21.36■■□□□ 1.01
TRAF4-203ENST00000394925 TUBGCP2Q9BSJ2 902 aa21.36■■□□□ 1.01
TRAF4-203ENST00000394925 EDEM3Q9BZQ6 932 aa21.36■■□□□ 1.01
TRAF4-203ENST00000394925 TTYH3Q9C0H2 523 aa21.36■■□□□ 1.01
TRAF4-203ENST00000394925 STRADBQ9C0K7 418 aa21.36■■□□□ 1.01
TRAF4-203ENST00000394925 GPR34Q9UPC5 381 aa21.36■■□□□ 1.01
TRAF4-203ENST00000394925 NEU3Q9UQ49 428 aa21.36■■□□□ 1.01
TRAF4-203ENST00000394925 ZSCAN5CA6NGD5 496 aaPredicted RBP21.35■■□□□ 1.01
TRAF4-203ENST00000394925 PES1O00541 588 aaKnown RBP21.35■■□□□ 1.01
TRAF4-203ENST00000394925 WISP1O95388 367 aa21.35■■□□□ 1.01
TRAF4-203ENST00000394925 IGSF6O95976 241 aa21.35■■□□□ 1.01
TRAF4-203ENST00000394925 RPLP0P05388 317 aaKnown RBP21.35■■□□□ 1.01
TRAF4-203ENST00000394925 PLEKP08567 350 aaPredicted RBP21.35■■□□□ 1.01
TRAF4-203ENST00000394925 HGFP14210 728 aa21.35■■□□□ 1.01
TRAF4-203ENST00000394925 SDC4P31431 198 aa21.35■■□□□ 1.01
TRAF4-203ENST00000394925 PEX5P50542 639 aa21.35■■□□□ 1.01
TRAF4-203ENST00000394925 NFATC3Q12968 1075 aa21.35■■□□□ 1.01
TRAF4-203ENST00000394925 TGIF1Q15583 401 aa21.35■■□□□ 1.01
TRAF4-203ENST00000394925 LVRNQ6Q4G3 990 aa21.35■■□□□ 1.01
TRAF4-203ENST00000394925 ENPP7Q6UWV6 458 aa21.35■■□□□ 1.01
TRAF4-203ENST00000394925 FAM114A1Q8IWE2 563 aa21.35■■□□□ 1.01
TRAF4-203ENST00000394925 EXD3Q8N9H8 876 aa21.35■■□□□ 1.01
TRAF4-203ENST00000394925 GPT2Q8TD30 523 aa21.35■■□□□ 1.01
TRAF4-203ENST00000394925 EPS8L1Q8TE68 723 aa21.35■■□□□ 1.01
TRAF4-203ENST00000394925 NAA15Q9BXJ9 866 aaKnown RBP21.35■■□□□ 1.01
TRAF4-203ENST00000394925 CPEB1Q9BZB8 566 aaKnown RBP21.35■■□□□ 1.01
TRAF4-203ENST00000394925 PCDHGA7Q9Y5G6 932 aa21.35■■□□□ 1.01
TRAF4-203ENST00000394925 A0A1W2PQM1 296 aa21.34■■□□□ 1.01
TRAF4-203ENST00000394925 D6RAR5 112 aa21.34■■□□□ 1.01
TRAF4-203ENST00000394925 TMX2-CTNND1H3BSU7 103 aa21.34■■□□□ 1.01
TRAF4-203ENST00000394925 RASGRP1O95267 797 aa21.34■■□□□ 1.01
TRAF4-203ENST00000394925 GJB6O95452 261 aa21.34■■□□□ 1.01
TRAF4-203ENST00000394925 XPAP23025 273 aaPredicted RBP21.34■■□□□ 1.01
TRAF4-203ENST00000394925 INHBCP55103 352 aa21.34■■□□□ 1.01
TRAF4-203ENST00000394925 RHOAP61586 193 aa21.34■■□□□ 1.01
TRAF4-203ENST00000394925 EIF3IQ13347 325 aaKnown RBP21.34■■□□□ 1.01
TRAF4-203ENST00000394925 LRRC14Q15048 493 aa21.34■■□□□ 1.01
TRAF4-203ENST00000394925 WSCD2Q2TBF2 565 aa21.34■■□□□ 1.01
TRAF4-203ENST00000394925 NYAP1Q6ZVC0 841 aa21.34■■□□□ 1.01
TRAF4-203ENST00000394925 USP53Q70EK8 1073 aa21.34■■□□□ 1.01
TRAF4-203ENST00000394925 GKN2Q86XP6 184 aa21.34■■□□□ 1.01
TRAF4-203ENST00000394925 CCDC185Q8N715 623 aa21.34■■□□□ 1.01
TRAF4-203ENST00000394925 MLKLQ8NB16 471 aa21.34■■□□□ 1.01
TRAF4-203ENST00000394925 JOSD2Q8TAC2 188 aa21.34■■□□□ 1.01
TRAF4-203ENST00000394925 KLC2Q9H0B6 622 aa21.34■■□□□ 1.01
TRAF4-203ENST00000394925 DKK3Q9UBP4 350 aa21.34■■□□□ 1.01
TRAF4-203ENST00000394925 TMEM110-MUSTN1A8MSY1 372 aa21.33■■□□□ 1.01
TRAF4-203ENST00000394925 AGRPO00253 132 aa21.33■■□□□ 1.01
TRAF4-203ENST00000394925 INSIG1O15503 277 aa21.33■■□□□ 1.01
TRAF4-203ENST00000394925 NOBOXO60393 691 aa21.33■■□□□ 1.01
TRAF4-203ENST00000394925 UCHL3P15374 230 aa21.33■■□□□ 1.01
TRAF4-203ENST00000394925 HTR1BP28222 390 aa21.33■■□□□ 1.01
TRAF4-203ENST00000394925 SRSF6Q13247 344 aaKnown RBP21.33■■□□□ 1.01
TRAF4-203ENST00000394925 LINC00303Q3SY05 128 aa21.33■■□□□ 1.01
TRAF4-203ENST00000394925 TMEM52BQ4KMG9 183 aa21.33■■□□□ 1.01
TRAF4-203ENST00000394925 SLC20A1Q8WUM9 679 aa21.33■■□□□ 1.01
TRAF4-203ENST00000394925 APOOQ9BUR5 198 aa21.33■■□□□ 1.01
TRAF4-203ENST00000394925 FAM117AQ9C073 453 aa21.33■■□□□ 1.01
TRAF4-203ENST00000394925 LRRN3Q9H3W5 708 aa21.33■■□□□ 1.01
TRAF4-203ENST00000394925 PISDQ9UG56 409 aa21.33■■□□□ 1.01
TRAF4-203ENST00000394925 MFHAS1Q9Y4C4 1052 aa21.33■■□□□ 1.01
TRAF4-203ENST00000394925 HEMK1Q9Y5R4 338 aaPredicted RBP21.33■■□□□ 1.01
TRAF4-203ENST00000394925 LRP4O75096 1905 aa21.33■■□□□ 1
TRAF4-203ENST00000394925 TLN1Q9Y490 2541 aaKnown RBP21.32■■□□□ 1
TRAF4-203ENST00000394925 SCN8AQ9UQD0 1980 aa21.32■■□□□ 1
TRAF4-203ENST00000394925 C2CD4BA6NLJ0 364 aa21.32■■□□□ 1
TRAF4-203ENST00000394925 F8VZ95 297 aa21.32■■□□□ 1
TRAF4-203ENST00000394925 ARHGAP6O43182 974 aa21.32■■□□□ 1
TRAF4-203ENST00000394925 PIGNO95427 931 aa21.32■■□□□ 1
TRAF4-203ENST00000394925 JMJD7P0C870 316 aa21.32■■□□□ 1
TRAF4-203ENST00000394925 SRP54P61011 504 aaKnown RBP21.32■■□□□ 1
TRAF4-203ENST00000394925 ELP6Q0PNE2 266 aa21.32■■□□□ 1
TRAF4-203ENST00000394925 INPP5AQ14642 412 aa21.32■■□□□ 1
TRAF4-203ENST00000394925 NFATC4Q14934 902 aa21.32■■□□□ 1
TRAF4-203ENST00000394925 STRADAQ7RTN6 431 aa21.32■■□□□ 1
TRAF4-203ENST00000394925 Q8N9G6 341 aaPredicted RBP21.32■■□□□ 1
TRAF4-203ENST00000394925 SLC30A5Q8TAD4 765 aa21.32■■□□□ 1
TRAF4-203ENST00000394925 CASKIN2Q8WXE0 1202 aa21.32■■□□□ 1
TRAF4-203ENST00000394925 SGF29Q96ES7 293 aa21.32■■□□□ 1
TRAF4-203ENST00000394925 EXOC2Q96KP1 924 aa21.32■■□□□ 1
TRAF4-203ENST00000394925 TMEM74Q96NL1 305 aa21.32■■□□□ 1
TRAF4-203ENST00000394925 NCAPGQ9BPX3 1015 aa21.32■■□□□ 1
TRAF4-203ENST00000394925 C11orf70Q9BRQ4 267 aa21.32■■□□□ 1
TRAF4-203ENST00000394925 STK33Q9BYT3 514 aa21.32■■□□□ 1
TRAF4-203ENST00000394925 NOL6Q9H6R4 1146 aaKnown RBP21.32■■□□□ 1
TRAF4-203ENST00000394925 KLQ9UEF7 1012 aa21.32■■□□□ 1
TRAF4-203ENST00000394925 OR1A2Q9Y585 309 aa21.32■■□□□ 1
TRAF4-203ENST00000394925 MMP8P22894 467 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms