RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 SPO11Q9Y5K1 396 aa20.51■□□□□ 0.87
PRKCD-202ENST00000394729 CORO7P57737 925 aa20.5■□□□□ 0.87
PRKCD-202ENST00000394729 FBXW10Q5XX13 1052 aa20.5■□□□□ 0.87
PRKCD-202ENST00000394729 ELMOD1Q8N336 334 aa20.5■□□□□ 0.87
PRKCD-202ENST00000394729 MAGEB16A2A368 324 aa20.5■□□□□ 0.87
PRKCD-202ENST00000394729 CTSOP43234 321 aaPredicted RBP20.5■□□□□ 0.87
PRKCD-202ENST00000394729 GRASPQ7Z6J2 395 aaPredicted RBP20.5■□□□□ 0.87
PRKCD-202ENST00000394729 PIM3Q86V86 326 aa20.5■□□□□ 0.87
PRKCD-202ENST00000394729 FEM1AQ9BSK4 669 aa20.5■□□□□ 0.87
PRKCD-202ENST00000394729 LINC00597Q9H2U6 94 aa20.5■□□□□ 0.87
PRKCD-202ENST00000394729 COMMD8Q9NX08 183 aa20.5■□□□□ 0.87
PRKCD-202ENST00000394729 VPS51Q9UID3 782 aa20.5■□□□□ 0.87
PRKCD-202ENST00000394729 FBXO5Q9UKT4 447 aa20.5■□□□□ 0.87
PRKCD-202ENST00000394729 PCDHB9Q9Y5E1 797 aa20.5■□□□□ 0.87
PRKCD-202ENST00000394729 PLXNA4Q9HCM2 1894 aa20.5■□□□□ 0.87
PRKCD-202ENST00000394729 SRRM3A6NNA2 597 aaPredicted RBP20.49■□□□□ 0.87
PRKCD-202ENST00000394729 EFCAB14O75071 495 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 ALDH3A1P30838 453 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 CD70P32970 193 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 CRHR1P34998 444 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 CDKN1CP49918 316 aaPredicted RBP20.49■□□□□ 0.87
PRKCD-202ENST00000394729 CYTH1Q15438 398 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 ACCSLQ4AC99 568 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 POTEHQ6S545 545 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 ATG14Q6ZNE5 492 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 RPS27LQ71UM5 84 aaKnown RBP20.49■□□□□ 0.87
PRKCD-202ENST00000394729 MTDHQ86UE4 582 aaKnown RBP20.49■□□□□ 0.87
PRKCD-202ENST00000394729 LRRC49Q8IUZ0 686 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 TMEM237Q96Q45 408 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 SEPT3Q9UH03 358 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 TLK1Q9UKI8 766 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 FAM95CA0A1B0GW59 222 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 TYW5A2RUC4 315 aaKnown RBP20.49■□□□□ 0.87
PRKCD-202ENST00000394729 LINC01553A4QN01 128 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 ALPIP09923 528 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 BMPR1AP36894 532 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 PLK1P53350 603 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 RHOAP61586 193 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 PABPC1LQ4VXU2 614 aaKnown RBP20.49■□□□□ 0.87
PRKCD-202ENST00000394729 TMC8Q8IU68 726 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 CAMK1DQ8IU85 385 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 EXT2Q93063 718 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 TLE6Q9H808 572 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.49■□□□□ 0.87
PRKCD-202ENST00000394729 USP34Q70CQ2 3546 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 HEATR9A2RTY3 570 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 LEFTY2O00292 366 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 PSMD3O43242 534 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 DHRS4L1P0CG22 281 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 ALADP13716 330 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 TSTD2Q5T7W7 516 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 FYB2Q5VWT5 728 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 KLHDC10Q6PID8 442 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 TTC7BQ86TV6 843 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 TEX26Q8N6G2 289 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 MRPL43Q8N983 215 aaKnown RBP20.49■□□□□ 0.87
PRKCD-202ENST00000394729 OVCA2Q8WZ82 227 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 ZSWIM3Q96MP5 696 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 SSU72Q9NP77 194 aaKnown RBP20.49■□□□□ 0.87
PRKCD-202ENST00000394729 ARMCX1Q9P291 453 aa20.49■□□□□ 0.87
PRKCD-202ENST00000394729 UBA6A0AVT1 1052 aaPredicted RBP20.48■□□□□ 0.87
PRKCD-202ENST00000394729 NEDD8-MDP1E9PL57 170 aa20.48■□□□□ 0.87
PRKCD-202ENST00000394729 PIGNO95427 931 aa20.48■□□□□ 0.87
PRKCD-202ENST00000394729 CBX6O95503 412 aa20.48■□□□□ 0.87
PRKCD-202ENST00000394729 PRAMEF12O95522 483 aa20.48■□□□□ 0.87
PRKCD-202ENST00000394729 CD160O95971 181 aa20.48■□□□□ 0.87
PRKCD-202ENST00000394729 TARSP26639 723 aaKnown RBP20.48■□□□□ 0.87
PRKCD-202ENST00000394729 SCTRP47872 440 aa20.48■□□□□ 0.87
PRKCD-202ENST00000394729 TAS2R39P59534 338 aa20.48■□□□□ 0.87
PRKCD-202ENST00000394729 HTRA4P83105 476 aaPredicted RBP20.48■□□□□ 0.87
PRKCD-202ENST00000394729 TMC5Q6UXY8 1006 aa20.48■□□□□ 0.87
PRKCD-202ENST00000394729 GCNAQ96QF7 691 aa20.48■□□□□ 0.87
PRKCD-202ENST00000394729 MYLK2Q9H1R3 596 aa20.48■□□□□ 0.87
PRKCD-202ENST00000394729 RUVBL2Q9Y230 463 aaKnown RBP20.48■□□□□ 0.87
PRKCD-202ENST00000394729 NEMP2A6NFY4 417 aa20.48■□□□□ 0.87
PRKCD-202ENST00000394729 KDELR3O43731 214 aa20.48■□□□□ 0.87
PRKCD-202ENST00000394729 GREM1O60565 184 aa20.48■□□□□ 0.87
PRKCD-202ENST00000394729 PLIN3O60664 434 aa20.48■□□□□ 0.87
PRKCD-202ENST00000394729 BPGMP07738 259 aa20.48■□□□□ 0.87
PRKCD-202ENST00000394729 SERPINB8P50452 374 aa20.48■□□□□ 0.87
PRKCD-202ENST00000394729 CSHL1Q14406 222 aa20.48■□□□□ 0.87
PRKCD-202ENST00000394729 TMEM25Q86YD3 366 aa20.48■□□□□ 0.87
PRKCD-202ENST00000394729 BBS5Q8N3I7 341 aa20.48■□□□□ 0.87
PRKCD-202ENST00000394729 OR4K2Q8NGD2 314 aa20.48■□□□□ 0.87
PRKCD-202ENST00000394729 SPPL3Q8TCT6 385 aa20.48■□□□□ 0.87
PRKCD-202ENST00000394729 ABCG8Q9H221 673 aa20.48■□□□□ 0.87
PRKCD-202ENST00000394729 TREX1Q9NSU2 369 aa20.48■□□□□ 0.87
PRKCD-202ENST00000394729 EVLQ9UI08 416 aaPredicted RBP20.48■□□□□ 0.87
PRKCD-202ENST00000394729 LSM7Q9UK45 103 aaKnown RBP20.48■□□□□ 0.87
PRKCD-202ENST00000394729 RAI2Q9Y5P3 530 aa20.48■□□□□ 0.87
PRKCD-202ENST00000394729 MYO15AQ9UKN7 3530 aa20.47■□□□□ 0.87
PRKCD-202ENST00000394729 LUC7L3O95232 432 aaKnown RBP20.47■□□□□ 0.87
PRKCD-202ENST00000394729 MYL2P10916 166 aa20.47■□□□□ 0.87
PRKCD-202ENST00000394729 CCNFP41002 786 aa20.47■□□□□ 0.87
PRKCD-202ENST00000394729 EPHB1P54762 984 aa20.47■□□□□ 0.87
PRKCD-202ENST00000394729 ZBTB16Q05516 673 aa20.47■□□□□ 0.87
PRKCD-202ENST00000394729 CAMK1Q14012 370 aa20.47■□□□□ 0.87
PRKCD-202ENST00000394729 FBXO48Q5FWF7 155 aa20.47■□□□□ 0.87
PRKCD-202ENST00000394729 LILRA6Q6PI73 481 aa20.47■□□□□ 0.87
PRKCD-202ENST00000394729 TBC1D1Q86TI0 1168 aaPredicted RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms