RNA–Protein interactions for RNA: ENST00000394120.6

DYSF-202, Transcript of dysferlin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-202ENST00000394120 NPR3P17342 541 aa13.09□□□□□ -0.31
DYSF-202ENST00000394120 LIMK2P53671 638 aa13.09□□□□□ -0.31
DYSF-202ENST00000394120 NFE2Q16621 373 aaPredicted RBP13.09□□□□□ -0.31
DYSF-202ENST00000394120 SCIMPQ6UWF3 145 aa13.09□□□□□ -0.31
DYSF-202ENST00000394120 UTS2BQ765I0 119 aa13.09□□□□□ -0.31
DYSF-202ENST00000394120 CERS5Q8N5B7 392 aa13.09□□□□□ -0.31
DYSF-202ENST00000394120 CDYL2Q8N8U2 506 aa13.09□□□□□ -0.31
DYSF-202ENST00000394120 PPP3R2Q96LZ3 170 aa13.09□□□□□ -0.31
DYSF-202ENST00000394120 PADI4Q9UM07 663 aa13.09□□□□□ -0.31
DYSF-202ENST00000394120 SLC22A3O75751 556 aa13.09□□□□□ -0.31
DYSF-202ENST00000394120 STAU1O95793 577 aaKnown RBP13.09□□□□□ -0.31
DYSF-202ENST00000394120 RPS9P46781 194 aaKnown RBP13.09□□□□□ -0.31
DYSF-202ENST00000394120 PARP8Q8N3A8 854 aa13.09□□□□□ -0.31
DYSF-202ENST00000394120 C12orf29Q8N999 325 aa13.09□□□□□ -0.31
DYSF-202ENST00000394120 NETO2Q8NC67 525 aa13.09□□□□□ -0.31
DYSF-202ENST00000394120 CENPNQ96H22 339 aaPredicted RBP13.09□□□□□ -0.31
DYSF-202ENST00000394120 CSPG4P5Q96PW8 444 aa13.09□□□□□ -0.31
DYSF-202ENST00000394120 ACSS2Q9NR19 701 aa13.09□□□□□ -0.31
DYSF-202ENST00000394120 IKZF3Q9UKT9 509 aa13.09□□□□□ -0.31
DYSF-202ENST00000394120 VWA7Q9Y334 891 aa13.09□□□□□ -0.31
DYSF-202ENST00000394120 PCDHA2Q9Y5H9 948 aa13.09□□□□□ -0.31
DYSF-202ENST00000394120 CASTOR2A6NHX0 329 aa13.09□□□□□ -0.31
DYSF-202ENST00000394120 G3V2T6 193 aa13.09□□□□□ -0.31
DYSF-202ENST00000394120 TMEM63AO94886 807 aa13.09□□□□□ -0.31
DYSF-202ENST00000394120 RAB15P59190 212 aa13.09□□□□□ -0.31
DYSF-202ENST00000394120 ARHGEF6Q15052 776 aa13.09□□□□□ -0.31
DYSF-202ENST00000394120 NADK2Q4G0N4 442 aa13.09□□□□□ -0.31
DYSF-202ENST00000394120 FGD3Q5JSP0 725 aa13.09□□□□□ -0.31
DYSF-202ENST00000394120 NBPF12Q5TAG4 269 aaPredicted RBP13.09□□□□□ -0.31
DYSF-202ENST00000394120 DDX53Q86TM3 631 aaKnown RBP13.09□□□□□ -0.31
DYSF-202ENST00000394120 HASPINQ8TF76 798 aa13.09□□□□□ -0.31
DYSF-202ENST00000394120 MRIQ9BWK5 157 aa13.09□□□□□ -0.31
DYSF-202ENST00000394120 UBA2Q9UBT2 640 aaPredicted RBP13.09□□□□□ -0.31
DYSF-202ENST00000394120 CCDC189A1A4V9 331 aa13.08□□□□□ -0.31
DYSF-202ENST00000394120 GPR182O15218 404 aa13.08□□□□□ -0.31
DYSF-202ENST00000394120 PTPN1P18031 435 aaKnown RBP13.08□□□□□ -0.31
DYSF-202ENST00000394120 MZT2BQ6NZ67 158 aa13.08□□□□□ -0.31
DYSF-202ENST00000394120 ZYG11AQ6WRX3 759 aa13.08□□□□□ -0.31
DYSF-202ENST00000394120 GPRIN3Q6ZVF9 776 aa13.08□□□□□ -0.31
DYSF-202ENST00000394120 ZNF410Q86VK4 478 aa13.08□□□□□ -0.31
DYSF-202ENST00000394120 SYT12Q8IV01 421 aa13.08□□□□□ -0.31
DYSF-202ENST00000394120 OFCC1Q8IZS5 231 aa13.08□□□□□ -0.31
DYSF-202ENST00000394120 POP5Q969H6 163 aaKnown RBP13.08□□□□□ -0.31
DYSF-202ENST00000394120 MIEF1Q9NQG6 463 aa13.08□□□□□ -0.31
DYSF-202ENST00000394120 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.08□□□□□ -0.31
DYSF-202ENST00000394120 CCDC182A6NF36 153 aa13.08□□□□□ -0.32
DYSF-202ENST00000394120 PRRG1O14668 218 aa13.08□□□□□ -0.32
DYSF-202ENST00000394120 HOXA10P31260 410 aaPredicted RBP13.08□□□□□ -0.32
DYSF-202ENST00000394120 CD86P42081 329 aa13.08□□□□□ -0.32
DYSF-202ENST00000394120 FKBP1AP62942 108 aaKnown RBP13.08□□□□□ -0.32
DYSF-202ENST00000394120 OVOS1Q6IE37 1185 aa13.08□□□□□ -0.32
DYSF-202ENST00000394120 FGD2Q7Z6J4 655 aa13.08□□□□□ -0.32
DYSF-202ENST00000394120 REXO5Q96IC2 774 aaKnown RBP13.08□□□□□ -0.32
DYSF-202ENST00000394120 COQ10BQ9H8M1 238 aa13.08□□□□□ -0.32
DYSF-202ENST00000394120 KRCC1Q9NPI7 259 aaPredicted RBP13.08□□□□□ -0.32
DYSF-202ENST00000394120 PCDHGC3Q9UN70 934 aa13.08□□□□□ -0.32
DYSF-202ENST00000394120 DYRK1BQ9Y463 629 aa13.08□□□□□ -0.32
DYSF-202ENST00000394120 YDJCA8MPS7 323 aa13.08□□□□□ -0.32
DYSF-202ENST00000394120 IPO13O94829 963 aaKnown RBP13.08□□□□□ -0.32
DYSF-202ENST00000394120 LDLRAP1Q5SW96 308 aa13.08□□□□□ -0.32
DYSF-202ENST00000394120 GIN1Q9NXP7 522 aa13.08□□□□□ -0.32
DYSF-202ENST00000394120 BUD23O43709 281 aaKnown RBP13.08□□□□□ -0.32
DYSF-202ENST00000394120 GNASQ5JWF2 1037 aa13.08□□□□□ -0.32
DYSF-202ENST00000394120 EPHX4Q8IUS5 362 aa13.08□□□□□ -0.32
DYSF-202ENST00000394120 ADI1Q9BV57 179 aa13.08□□□□□ -0.32
DYSF-202ENST00000394120 PRDM5Q9NQX1 630 aaPredicted RBP13.08□□□□□ -0.32
DYSF-202ENST00000394120 RAPGEFL1Q9UHV5 662 aa13.08□□□□□ -0.32
DYSF-202ENST00000394120 DGKBQ9Y6T7 804 aa13.08□□□□□ -0.32
DYSF-202ENST00000394120 KNDC1Q76NI1 1749 aa13.08□□□□□ -0.32
DYSF-202ENST00000394120 H0YC42 278 aa13.08□□□□□ -0.32
DYSF-202ENST00000394120 M0R2N6 131 aa13.08□□□□□ -0.32
DYSF-202ENST00000394120 KPNA1P52294 538 aaPredicted RBP13.08□□□□□ -0.32
DYSF-202ENST00000394120 KLHDC10Q6PID8 442 aa13.08□□□□□ -0.32
DYSF-202ENST00000394120 WDR36Q8NI36 951 aaKnown RBP13.08□□□□□ -0.32
DYSF-202ENST00000394120 HTRA1Q92743 480 aa13.08□□□□□ -0.32
DYSF-202ENST00000394120 ZBTB7AO95365 584 aa13.07□□□□□ -0.32
DYSF-202ENST00000394120 CYP2B6P20813 491 aa13.07□□□□□ -0.32
DYSF-202ENST00000394120 CDK9P50750 372 aaKnown RBP13.07□□□□□ -0.32
DYSF-202ENST00000394120 PPP1R26Q5T8A7 1209 aaPredicted RBP13.07□□□□□ -0.32
DYSF-202ENST00000394120 CARNMT1Q8N4J0 409 aa13.07□□□□□ -0.32
DYSF-202ENST00000394120 FAM156AQ8NDB6 213 aa13.07□□□□□ -0.32
DYSF-202ENST00000394120 BSNDQ8WZ55 320 aa13.07□□□□□ -0.32
DYSF-202ENST00000394120 STARD8Q92502 1023 aa13.07□□□□□ -0.32
DYSF-202ENST00000394120 PARK7Q99497 189 aaKnown RBP13.07□□□□□ -0.32
DYSF-202ENST00000394120 FAM126AQ9BYI3 521 aaPredicted RBP13.07□□□□□ -0.32
DYSF-202ENST00000394120 PLK2Q9NYY3 685 aa13.07□□□□□ -0.32
DYSF-202ENST00000394120 PRR23AA6NEV1 266 aa13.07□□□□□ -0.32
DYSF-202ENST00000394120 CLDN25C9JDP6 229 aa13.07□□□□□ -0.32
DYSF-202ENST00000394120 CYP2A7P20853 494 aa13.07□□□□□ -0.32
DYSF-202ENST00000394120 RNF19BQ6ZMZ0 732 aa13.07□□□□□ -0.32
DYSF-202ENST00000394120 STK40Q8N2I9 435 aa13.07□□□□□ -0.32
DYSF-202ENST00000394120 CPSF7Q8N684 471 aaKnown RBP13.07□□□□□ -0.32
DYSF-202ENST00000394120 DCAKDQ8WVC6 231 aa13.07□□□□□ -0.32
DYSF-202ENST00000394120 MUC13Q9H3R2 512 aa13.07□□□□□ -0.32
DYSF-202ENST00000394120 ATP13A1Q9HD20 1204 aa13.07□□□□□ -0.32
DYSF-202ENST00000394120 DNAAF2Q9NVR5 837 aaKnown RBP13.07□□□□□ -0.32
DYSF-202ENST00000394120 RECQL4O94761 1208 aa13.07□□□□□ -0.32
DYSF-202ENST00000394120 FGFR1P11362 822 aa13.07□□□□□ -0.32
DYSF-202ENST00000394120 COX7A2P14406 83 aa13.07□□□□□ -0.32
DYSF-202ENST00000394120 ACSM2AQ08AH3 577 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms