RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 ADRA1BP35368 520 aa15.54■□□□□ 0.08
CHMP3-202ENST00000393773 PEX5P50542 639 aa15.54■□□□□ 0.08
CHMP3-202ENST00000393773 CCL7P80098 99 aa15.54■□□□□ 0.08
CHMP3-202ENST00000393773 RAPGEF1Q13905 1077 aa15.54■□□□□ 0.08
CHMP3-202ENST00000393773 NFATC4Q14934 902 aa15.54■□□□□ 0.08
CHMP3-202ENST00000393773 ELOCQ15369 112 aa15.54■□□□□ 0.08
CHMP3-202ENST00000393773 MAN2A1Q16706 1144 aa15.54■□□□□ 0.08
CHMP3-202ENST00000393773 CDO1Q16878 200 aa15.54■□□□□ 0.08
CHMP3-202ENST00000393773 MIIPQ5JXC2 388 aa15.54■□□□□ 0.08
CHMP3-202ENST00000393773 KCTD16Q68DU8 428 aa15.54■□□□□ 0.08
CHMP3-202ENST00000393773 RWDD4Q6NW29 188 aaKnown RBP15.54■□□□□ 0.08
CHMP3-202ENST00000393773 LVRNQ6Q4G3 990 aa15.54■□□□□ 0.08
CHMP3-202ENST00000393773 FBXO39Q8N4B4 442 aa15.54■□□□□ 0.08
CHMP3-202ENST00000393773 SGF29Q96ES7 293 aa15.54■□□□□ 0.08
CHMP3-202ENST00000393773 NAA15Q9BXJ9 866 aaKnown RBP15.54■□□□□ 0.08
CHMP3-202ENST00000393773 MAGEB5Q9BZ81 275 aa15.54■□□□□ 0.08
CHMP3-202ENST00000393773 CPEB1Q9BZB8 566 aaKnown RBP15.54■□□□□ 0.08
CHMP3-202ENST00000393773 EDEM3Q9BZQ6 932 aa15.54■□□□□ 0.08
CHMP3-202ENST00000393773 TRIM4Q9C037 500 aa15.54■□□□□ 0.08
CHMP3-202ENST00000393773 TTYH3Q9C0H2 523 aa15.54■□□□□ 0.08
CHMP3-202ENST00000393773 NOL6Q9H6R4 1146 aaKnown RBP15.54■□□□□ 0.08
CHMP3-202ENST00000393773 STARD5Q9NSY2 213 aa15.54■□□□□ 0.08
CHMP3-202ENST00000393773 DKK3Q9UBP4 350 aa15.54■□□□□ 0.08
CHMP3-202ENST00000393773 GULP1Q9UBP9 304 aa15.54■□□□□ 0.08
CHMP3-202ENST00000393773 COQ6Q9Y2Z9 468 aa15.54■□□□□ 0.08
CHMP3-202ENST00000393773 ZFC3H1O60293 1989 aaKnown RBP15.53■□□□□ 0.08
CHMP3-202ENST00000393773 ZSCAN5CA6NGD5 496 aaPredicted RBP15.53■□□□□ 0.08
CHMP3-202ENST00000393773 KDELR3O43731 214 aa15.53■□□□□ 0.08
CHMP3-202ENST00000393773 IGSF6O95976 241 aa15.53■□□□□ 0.08
CHMP3-202ENST00000393773 ITGB2P05107 769 aa15.53■□□□□ 0.08
CHMP3-202ENST00000393773 MMEP08473 750 aa15.53■□□□□ 0.08
CHMP3-202ENST00000393773 TIMP2P16035 220 aa15.53■□□□□ 0.08
CHMP3-202ENST00000393773 CSRP3P50461 194 aa15.53■□□□□ 0.08
CHMP3-202ENST00000393773 BLKP51451 505 aa15.53■□□□□ 0.08
CHMP3-202ENST00000393773 INHBCP55103 352 aa15.53■□□□□ 0.08
CHMP3-202ENST00000393773 WSCD2Q2TBF2 565 aa15.53■□□□□ 0.08
CHMP3-202ENST00000393773 TMEM52BQ4KMG9 183 aa15.53■□□□□ 0.08
CHMP3-202ENST00000393773 NAA35Q5VZE5 725 aa15.53■□□□□ 0.08
CHMP3-202ENST00000393773 TTC7BQ86TV6 843 aa15.53■□□□□ 0.08
CHMP3-202ENST00000393773 JAMLQ86YT9 394 aa15.53■□□□□ 0.08
CHMP3-202ENST00000393773 HID1Q8IV36 788 aa15.53■□□□□ 0.08
CHMP3-202ENST00000393773 CCDC185Q8N715 623 aa15.53■□□□□ 0.08
CHMP3-202ENST00000393773 MSANTD4Q8NCY6 345 aa15.53■□□□□ 0.08
CHMP3-202ENST00000393773 CPA5Q8WXQ8 436 aa15.53■□□□□ 0.08
CHMP3-202ENST00000393773 TSACCQ96A04 125 aaPredicted RBP15.53■□□□□ 0.08
CHMP3-202ENST00000393773 TBC1D31Q96DN5 1066 aa15.53■□□□□ 0.08
CHMP3-202ENST00000393773 PDXPQ96GD0 296 aa15.53■□□□□ 0.08
CHMP3-202ENST00000393773 STRADBQ9C0K7 418 aa15.53■□□□□ 0.08
CHMP3-202ENST00000393773 KLC2Q9H0B6 622 aa15.53■□□□□ 0.08
CHMP3-202ENST00000393773 KIAA1468Q9P260 1216 aa15.53■□□□□ 0.08
CHMP3-202ENST00000393773 HPCAL4Q9UM19 191 aa15.53■□□□□ 0.08
CHMP3-202ENST00000393773 GPR34Q9UPC5 381 aa15.53■□□□□ 0.08
CHMP3-202ENST00000393773 DOLKQ9UPQ8 538 aa15.53■□□□□ 0.08
CHMP3-202ENST00000393773 MFHAS1Q9Y4C4 1052 aa15.53■□□□□ 0.08
CHMP3-202ENST00000393773 SPENQ96T58 3664 aaKnown RBP15.53■□□□□ 0.08
CHMP3-202ENST00000393773 LRRK2Q5S007 2527 aa15.52■□□□□ 0.08
CHMP3-202ENST00000393773 TSPAN11A1L157 253 aa15.52■□□□□ 0.08
CHMP3-202ENST00000393773 F8VZ95 297 aa15.52■□□□□ 0.08
CHMP3-202ENST00000393773 TMX2-CTNND1H3BSU7 103 aa15.52■□□□□ 0.08
CHMP3-202ENST00000393773 RASGRP1O95267 797 aa15.52■□□□□ 0.08
CHMP3-202ENST00000393773 ITGB6P18564 788 aa15.52■□□□□ 0.08
CHMP3-202ENST00000393773 LRRC14Q15048 493 aa15.52■□□□□ 0.08
CHMP3-202ENST00000393773 CCDC14Q49A88 953 aa15.52■□□□□ 0.08
CHMP3-202ENST00000393773 KLHDC7AQ5VTJ3 777 aa15.52■□□□□ 0.08
CHMP3-202ENST00000393773 NETO2Q8NC67 525 aa15.52■□□□□ 0.08
CHMP3-202ENST00000393773 JOSD2Q8TAC2 188 aa15.52■□□□□ 0.08
CHMP3-202ENST00000393773 RXFP2Q8WXD0 754 aa15.52■□□□□ 0.08
CHMP3-202ENST00000393773 SCG3Q8WXD2 468 aaKnown RBP15.52■□□□□ 0.08
CHMP3-202ENST00000393773 EXTL1Q92935 676 aa15.52■□□□□ 0.08
CHMP3-202ENST00000393773 FAM117AQ9C073 453 aa15.52■□□□□ 0.08
CHMP3-202ENST00000393773 NDST4Q9H3R1 872 aa15.52■□□□□ 0.08
CHMP3-202ENST00000393773 LRRN3Q9H3W5 708 aa15.52■□□□□ 0.08
CHMP3-202ENST00000393773 LHX3Q9UBR4 397 aa15.52■□□□□ 0.08
CHMP3-202ENST00000393773 PISDQ9UG56 409 aa15.52■□□□□ 0.08
CHMP3-202ENST00000393773 NOCTQ9UK39 431 aaKnown RBP15.52■□□□□ 0.08
CHMP3-202ENST00000393773 LOXL2Q9Y4K0 774 aa15.52■□□□□ 0.08
CHMP3-202ENST00000393773 PCDHGA4Q9Y5G9 962 aa15.52■□□□□ 0.08
CHMP3-202ENST00000393773 HEMK1Q9Y5R4 338 aaPredicted RBP15.52■□□□□ 0.08
CHMP3-202ENST00000393773 RELNP78509 3460 aa15.51■□□□□ 0.07
CHMP3-202ENST00000393773 PRAMEF33A0A0G2JMD5 474 aa15.51■□□□□ 0.07
CHMP3-202ENST00000393773 C2CD4BA6NLJ0 364 aa15.51■□□□□ 0.07
CHMP3-202ENST00000393773 TMEM110-MUSTN1A8MSY1 372 aa15.51■□□□□ 0.07
CHMP3-202ENST00000393773 NVLO15381 856 aaKnown RBP15.51■□□□□ 0.07
CHMP3-202ENST00000393773 INSIG1O15503 277 aa15.51■□□□□ 0.07
CHMP3-202ENST00000393773 PRAMEF10O60809 474 aa15.51■□□□□ 0.07
CHMP3-202ENST00000393773 PIGNO95427 931 aa15.51■□□□□ 0.07
CHMP3-202ENST00000393773 GJB6O95452 261 aa15.51■□□□□ 0.07
CHMP3-202ENST00000393773 JMJD7P0C870 316 aa15.51■□□□□ 0.07
CHMP3-202ENST00000393773 ITIH1P19827 911 aa15.51■□□□□ 0.07
CHMP3-202ENST00000393773 SDC4P31431 198 aa15.51■□□□□ 0.07
CHMP3-202ENST00000393773 MMP12P39900 470 aa15.51■□□□□ 0.07
CHMP3-202ENST00000393773 ETV5P41161 510 aa15.51■□□□□ 0.07
CHMP3-202ENST00000393773 PTPN9P43378 593 aa15.51■□□□□ 0.07
CHMP3-202ENST00000393773 HDAC4P56524 1084 aa15.51■□□□□ 0.07
CHMP3-202ENST00000393773 SRP54P61011 504 aaKnown RBP15.51■□□□□ 0.07
CHMP3-202ENST00000393773 RHOAP61586 193 aa15.51■□□□□ 0.07
CHMP3-202ENST00000393773 NFKB2Q00653 900 aa15.51■□□□□ 0.07
CHMP3-202ENST00000393773 ELP6Q0PNE2 266 aa15.51■□□□□ 0.07
CHMP3-202ENST00000393773 AGERQ15109 404 aa15.51■□□□□ 0.07
CHMP3-202ENST00000393773 VWA3BQ502W6 1294 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms