RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 MAN1C1Q9NR34 630 aa22.35■■□□□ 1.17
HMGA2-203ENST00000393578 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.35■■□□□ 1.17
HMGA2-203ENST00000393578 TGDSO95455 350 aa22.34■■□□□ 1.17
HMGA2-203ENST00000393578 PTPN2P17706 415 aa22.34■■□□□ 1.17
HMGA2-203ENST00000393578 CSKP41240 450 aa22.34■■□□□ 1.17
HMGA2-203ENST00000393578 TMPRSS15P98073 1019 aa22.34■■□□□ 1.17
HMGA2-203ENST00000393578 ACVR1Q04771 509 aa22.34■■□□□ 1.17
HMGA2-203ENST00000393578 USP10Q14694 798 aaKnown RBP22.34■■□□□ 1.17
HMGA2-203ENST00000393578 DLG2Q15700 870 aa22.34■■□□□ 1.17
HMGA2-203ENST00000393578 CHI3L2Q15782 390 aa22.34■■□□□ 1.17
HMGA2-203ENST00000393578 SHKBP1Q8TBC3 707 aa22.34■■□□□ 1.17
HMGA2-203ENST00000393578 ZNF398Q8TD17 642 aa22.34■■□□□ 1.17
HMGA2-203ENST00000393578 BLOC1S5Q8TDH9 187 aa22.34■■□□□ 1.17
HMGA2-203ENST00000393578 TDRD1Q9BXT4 1180 aaKnown RBP22.34■■□□□ 1.17
HMGA2-203ENST00000393578 MFSD1Q9H3U5 465 aa22.34■■□□□ 1.17
HMGA2-203ENST00000393578 TMEM216Q9P0N5 145 aa22.34■■□□□ 1.17
HMGA2-203ENST00000393578 DNMT3BQ9UBC3 853 aaKnown RBP22.34■■□□□ 1.17
HMGA2-203ENST00000393578 VPS51Q9UID3 782 aa22.34■■□□□ 1.17
HMGA2-203ENST00000393578 RIMKLBQ9ULI2 386 aa22.34■■□□□ 1.17
HMGA2-203ENST00000393578 RFPL2O75678 378 aa22.34■■□□□ 1.17
HMGA2-203ENST00000393578 PRKCGP05129 697 aa22.34■■□□□ 1.17
HMGA2-203ENST00000393578 RB1P06400 928 aa22.34■■□□□ 1.17
HMGA2-203ENST00000393578 HOXA9P31269 272 aa22.34■■□□□ 1.17
HMGA2-203ENST00000393578 CD151P48509 253 aa22.34■■□□□ 1.17
HMGA2-203ENST00000393578 FASTKD1Q53R41 847 aaKnown RBP22.34■■□□□ 1.17
HMGA2-203ENST00000393578 GPR158Q5T848 1215 aa22.34■■□□□ 1.17
HMGA2-203ENST00000393578 GALNT7Q86SF2 657 aa22.34■■□□□ 1.17
HMGA2-203ENST00000393578 LCA5Q86VQ0 697 aa22.34■■□□□ 1.17
HMGA2-203ENST00000393578 LMNTD2Q8IXW0 634 aa22.34■■□□□ 1.17
HMGA2-203ENST00000393578 BHMTQ93088 406 aa22.34■■□□□ 1.17
HMGA2-203ENST00000393578 C2orf49Q9BVC5 232 aaPredicted RBP22.34■■□□□ 1.17
HMGA2-203ENST00000393578 ABCF3Q9NUQ8 709 aa22.34■■□□□ 1.17
HMGA2-203ENST00000393578 TLK1Q9UKI8 766 aa22.34■■□□□ 1.17
HMGA2-203ENST00000393578 CHKBQ9Y259 395 aa22.34■■□□□ 1.17
HMGA2-203ENST00000393578 ANKRD6Q9Y2G4 727 aa22.34■■□□□ 1.17
HMGA2-203ENST00000393578 USH1CQ9Y6N9 552 aa22.34■■□□□ 1.17
HMGA2-203ENST00000393578 BPTFQ12830 3046 aa22.33■■□□□ 1.17
HMGA2-203ENST00000393578 E2F8A0AVK6 867 aa22.33■■□□□ 1.17
HMGA2-203ENST00000393578 PRAMEP78395 509 aa22.33■■□□□ 1.17
HMGA2-203ENST00000393578 IRX4P78413 519 aa22.33■■□□□ 1.17
HMGA2-203ENST00000393578 BST1Q10588 318 aa22.33■■□□□ 1.17
HMGA2-203ENST00000393578 CAMK1Q14012 370 aa22.33■■□□□ 1.17
HMGA2-203ENST00000393578 HDAC10Q969S8 669 aa22.33■■□□□ 1.17
HMGA2-203ENST00000393578 THOC1Q96FV9 657 aaKnown RBP22.33■■□□□ 1.17
HMGA2-203ENST00000393578 RMDN2Q96LZ7 410 aa22.33■■□□□ 1.17
HMGA2-203ENST00000393578 C7orf26Q96N11 449 aa22.33■■□□□ 1.17
HMGA2-203ENST00000393578 TRIM55Q9BYV6 548 aa22.33■■□□□ 1.17
HMGA2-203ENST00000393578 NPHS2Q9NP85 383 aa22.33■■□□□ 1.17
HMGA2-203ENST00000393578 AVPR1AP37288 418 aa22.32■■□□□ 1.16
HMGA2-203ENST00000393578 LEPRP48357 1165 aaKnown RBP22.32■■□□□ 1.16
HMGA2-203ENST00000393578 RAPH1Q70E73 1250 aa22.32■■□□□ 1.16
HMGA2-203ENST00000393578 RNF135Q8IUD6 432 aa22.32■■□□□ 1.16
HMGA2-203ENST00000393578 CMTM8Q8IZV2 173 aa22.32■■□□□ 1.16
HMGA2-203ENST00000393578 PLD6Q8N2A8 252 aaKnown RBP22.32■■□□□ 1.16
HMGA2-203ENST00000393578 GBP7Q8N8V2 638 aaPredicted RBP22.32■■□□□ 1.16
HMGA2-203ENST00000393578 OR6P1Q8NGX9 317 aa22.32■■□□□ 1.16
HMGA2-203ENST00000393578 C10orf82Q8WW14 230 aa22.32■■□□□ 1.16
HMGA2-203ENST00000393578 LBHD1Q9BQE6 289 aaPredicted RBP22.32■■□□□ 1.16
HMGA2-203ENST00000393578 LHX3Q9UBR4 397 aa22.32■■□□□ 1.16
HMGA2-203ENST00000393578 KCTD3Q9Y597 815 aa22.32■■□□□ 1.16
HMGA2-203ENST00000393578 ARL5AQ9Y689 179 aa22.32■■□□□ 1.16
HMGA2-203ENST00000393578 FAM95CA0A1B0GW59 222 aa22.32■■□□□ 1.16
HMGA2-203ENST00000393578 MYO1CO00159 1063 aa22.32■■□□□ 1.16
HMGA2-203ENST00000393578 GRM6O15303 877 aa22.32■■□□□ 1.16
HMGA2-203ENST00000393578 HAUS5O94927 633 aa22.32■■□□□ 1.16
HMGA2-203ENST00000393578 PRLP01236 227 aa22.32■■□□□ 1.16
HMGA2-203ENST00000393578 ALDH3A1P30838 453 aa22.32■■□□□ 1.16
HMGA2-203ENST00000393578 IRS1P35568 1242 aa22.32■■□□□ 1.16
HMGA2-203ENST00000393578 ARSDP51689 593 aa22.32■■□□□ 1.16
HMGA2-203ENST00000393578 OVGP1Q12889 678 aa22.32■■□□□ 1.16
HMGA2-203ENST00000393578 ARHGAP15Q53QZ3 475 aa22.32■■□□□ 1.16
HMGA2-203ENST00000393578 TAF1BQ53T94 588 aaPredicted RBP22.32■■□□□ 1.16
HMGA2-203ENST00000393578 RALGPS1Q5JS13 557 aa22.32■■□□□ 1.16
HMGA2-203ENST00000393578 CILP2Q8IUL8 1156 aa22.32■■□□□ 1.16
HMGA2-203ENST00000393578 LEMD2Q8NC56 503 aa22.32■■□□□ 1.16
HMGA2-203ENST00000393578 FIBINQ8TAL6 211 aa22.32■■□□□ 1.16
HMGA2-203ENST00000393578 SH3RF2Q8TEC5 729 aa22.32■■□□□ 1.16
HMGA2-203ENST00000393578 ACDQ96AP0 544 aa22.32■■□□□ 1.16
HMGA2-203ENST00000393578 RMDN1Q96DB5 314 aa22.32■■□□□ 1.16
HMGA2-203ENST00000393578 TCEAL4Q96EI5 215 aa22.32■■□□□ 1.16
HMGA2-203ENST00000393578 ADGRE3Q9BY15 652 aa22.32■■□□□ 1.16
HMGA2-203ENST00000393578 SMG9Q9H0W8 520 aaKnown RBP22.32■■□□□ 1.16
HMGA2-203ENST00000393578 ACTR5Q9H9F9 607 aaPredicted RBP22.32■■□□□ 1.16
HMGA2-203ENST00000393578 ZNF358Q9NW07 568 aa22.32■■□□□ 1.16
HMGA2-203ENST00000393578 COPG2Q9UBF2 871 aa22.32■■□□□ 1.16
HMGA2-203ENST00000393578 RAI2Q9Y5P3 530 aa22.32■■□□□ 1.16
HMGA2-203ENST00000393578 SOBPA7XYQ1 873 aa22.31■■□□□ 1.16
HMGA2-203ENST00000393578 CRTAMO95727 393 aa22.31■■□□□ 1.16
HMGA2-203ENST00000393578 HNRNPA1P09651 372 aaKnown RBP eCLIP22.31■■□□□ 1.16
HMGA2-203ENST00000393578 COL6A2P12110 1019 aa22.31■■□□□ 1.16
HMGA2-203ENST00000393578 GMPRP36959 345 aa22.31■■□□□ 1.16
HMGA2-203ENST00000393578 RAB10P61026 200 aa22.31■■□□□ 1.16
HMGA2-203ENST00000393578 IRF9Q00978 393 aa22.31■■□□□ 1.16
HMGA2-203ENST00000393578 SLC12A1Q13621 1099 aa22.31■■□□□ 1.16
HMGA2-203ENST00000393578 PCLAFQ15004 111 aa22.31■■□□□ 1.16
HMGA2-203ENST00000393578 RETSATQ6NUM9 610 aa22.31■■□□□ 1.16
HMGA2-203ENST00000393578 TPGS1Q6ZTW0 290 aa22.31■■□□□ 1.16
HMGA2-203ENST00000393578 SPRED2Q7Z698 418 aa22.31■■□□□ 1.16
HMGA2-203ENST00000393578 SLC41A1Q8IVJ1 513 aa22.31■■□□□ 1.16
HMGA2-203ENST00000393578 STYXQ8WUJ0 223 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms