RNA–Protein interactions for RNA: ENST00000393577.7

HMGA2-202, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3 BASIC

Gene HMGA2, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-202ENST00000393577 FPGTO14772 594 aa23.36■■□□□ 1.33
HMGA2-202ENST00000393577 TRIM16O95361 564 aa23.36■■□□□ 1.33
HMGA2-202ENST00000393577 ARHGAP25P42331 645 aa23.36■■□□□ 1.33
HMGA2-202ENST00000393577 SUOXP51687 545 aa23.36■■□□□ 1.33
HMGA2-202ENST00000393577 BCL2L1Q07817 233 aa23.36■■□□□ 1.33
HMGA2-202ENST00000393577 PGBD5Q8N414 524 aa23.36■■□□□ 1.33
HMGA2-202ENST00000393577 PAF1Q8N7H5 531 aa23.36■■□□□ 1.33
HMGA2-202ENST00000393577 PNPLA1Q8N8W4 532 aa23.36■■□□□ 1.33
HMGA2-202ENST00000393577 DENND6BQ8NEG7 585 aa23.36■■□□□ 1.33
HMGA2-202ENST00000393577 FAM174AQ8TBP5 190 aa23.36■■□□□ 1.33
HMGA2-202ENST00000393577 NSMCE1Q8WV22 266 aa23.36■■□□□ 1.33
HMGA2-202ENST00000393577 ASB12Q8WXK4 309 aa23.36■■□□□ 1.33
HMGA2-202ENST00000393577 MRFAP1L1Q96HT8 127 aa23.36■■□□□ 1.33
HMGA2-202ENST00000393577 SCNM1Q9BWG6 230 aa23.36■■□□□ 1.33
HMGA2-202ENST00000393577 PCDH12Q9NPG4 1184 aa23.36■■□□□ 1.33
HMGA2-202ENST00000393577 APOBEC2Q9Y235 224 aaKnown RBP23.36■■□□□ 1.33
HMGA2-202ENST00000393577 TDRD6O60522 2096 aaKnown RBP23.36■■□□□ 1.33
HMGA2-202ENST00000393577 GOLGA8CPA6NN73 597 aa23.35■■□□□ 1.33
HMGA2-202ENST00000393577 SDC3O75056 442 aa23.35■■□□□ 1.33
HMGA2-202ENST00000393577 TM7SF2O76062 418 aa23.35■■□□□ 1.33
HMGA2-202ENST00000393577 MAP3K6O95382 1288 aa23.35■■□□□ 1.33
HMGA2-202ENST00000393577 PRKCGP05129 697 aa23.35■■□□□ 1.33
HMGA2-202ENST00000393577 AP1S1P61966 158 aa23.35■■□□□ 1.33
HMGA2-202ENST00000393577 PAFAH1B3Q15102 231 aaKnown RBP23.35■■□□□ 1.33
HMGA2-202ENST00000393577 TMEM52BQ4KMG9 183 aa23.35■■□□□ 1.33
HMGA2-202ENST00000393577 ERAP2Q6P179 960 aa23.35■■□□□ 1.33
HMGA2-202ENST00000393577 KDM7AQ6ZMT4 941 aa23.35■■□□□ 1.33
HMGA2-202ENST00000393577 SLCO6A1Q86UG4 719 aa23.35■■□□□ 1.33
HMGA2-202ENST00000393577 BBS5Q8N3I7 341 aa23.35■■□□□ 1.33
HMGA2-202ENST00000393577 RAPGEF5Q92565 580 aa23.35■■□□□ 1.33
HMGA2-202ENST00000393577 FAF2Q96CS3 445 aa23.35■■□□□ 1.33
HMGA2-202ENST00000393577 NSMCE3Q96MG7 304 aa23.35■■□□□ 1.33
HMGA2-202ENST00000393577 FTSJ1Q9UET6 329 aa23.35■■□□□ 1.33
HMGA2-202ENST00000393577 ATP8A1Q9Y2Q0 1164 aa23.35■■□□□ 1.33
HMGA2-202ENST00000393577 COL5A1P20908 1838 aaPredicted RBP23.35■■□□□ 1.33
HMGA2-202ENST00000393577 TPRP12270 2363 aaKnown RBP23.35■■□□□ 1.33
HMGA2-202ENST00000393577 ATXN1LP0C7T5 689 aaKnown RBP23.34■■□□□ 1.33
HMGA2-202ENST00000393577 KDELR1P24390 212 aa23.34■■□□□ 1.33
HMGA2-202ENST00000393577 HSPA9P38646 679 aaKnown RBP23.34■■□□□ 1.33
HMGA2-202ENST00000393577 MAGEA1P43355 309 aa23.34■■□□□ 1.33
HMGA2-202ENST00000393577 RABIFP47224 123 aa23.34■■□□□ 1.33
HMGA2-202ENST00000393577 MAXP61244 160 aa23.34■■□□□ 1.33
HMGA2-202ENST00000393577 SEMG2Q02383 582 aa23.34■■□□□ 1.33
HMGA2-202ENST00000393577 GALNT2Q10471 571 aa23.34■■□□□ 1.33
HMGA2-202ENST00000393577 LRRC49Q8IUZ0 686 aa23.34■■□□□ 1.33
HMGA2-202ENST00000393577 CHCHD4Q8N4Q1 142 aa23.34■■□□□ 1.33
HMGA2-202ENST00000393577 EID2Q8N6I1 236 aa23.34■■□□□ 1.33
HMGA2-202ENST00000393577 ECHDC3Q96DC8 303 aa23.34■■□□□ 1.33
HMGA2-202ENST00000393577 MGME1Q9BQP7 344 aa23.34■■□□□ 1.33
HMGA2-202ENST00000393577 GPR27Q9NS67 375 aa23.34■■□□□ 1.33
HMGA2-202ENST00000393577 TOR4AQ9NXH8 423 aa23.34■■□□□ 1.33
HMGA2-202ENST00000393577 COQ6Q9Y2Z9 468 aa23.34■■□□□ 1.33
HMGA2-202ENST00000393577 SPEGQ15772 3267 aa23.34■■□□□ 1.33
HMGA2-202ENST00000393577 LRRD1A4D1F6 860 aa23.33■■□□□ 1.33
HMGA2-202ENST00000393577 TRAFD1O14545 582 aaPredicted RBP23.33■■□□□ 1.33
HMGA2-202ENST00000393577 RIOK3O14730 519 aaKnown RBP23.33■■□□□ 1.33
HMGA2-202ENST00000393577 TNFSF14O43557 240 aa23.33■■□□□ 1.33
HMGA2-202ENST00000393577 CR2P20023 1033 aa23.33■■□□□ 1.33
HMGA2-202ENST00000393577 IGFALSP35858 605 aa23.33■■□□□ 1.33
HMGA2-202ENST00000393577 MMP12P39900 470 aa23.33■■□□□ 1.33
HMGA2-202ENST00000393577 GARSP41250 739 aaKnown RBP23.33■■□□□ 1.33
HMGA2-202ENST00000393577 MMP13P45452 471 aa23.33■■□□□ 1.33
HMGA2-202ENST00000393577 MARC1Q5VT66 337 aa23.33■■□□□ 1.33
HMGA2-202ENST00000393577 KANSL1Q7Z3B3 1105 aa23.33■■□□□ 1.33
HMGA2-202ENST00000393577 RAB44Q7Z6P3 723 aaPredicted RBP23.33■■□□□ 1.33
HMGA2-202ENST00000393577 DCP2Q8IU60 420 aaKnown RBP23.33■■□□□ 1.33
HMGA2-202ENST00000393577 PQLC3Q8N755 202 aa23.33■■□□□ 1.33
HMGA2-202ENST00000393577 CENPTQ96BT3 561 aa23.33■■□□□ 1.33
HMGA2-202ENST00000393577 NUDCD1Q96RS6 583 aa23.33■■□□□ 1.33
HMGA2-202ENST00000393577 C1QTNF7Q9BXJ2 289 aa23.33■■□□□ 1.33
HMGA2-202ENST00000393577 CAAP1Q9H8G2 361 aa23.33■■□□□ 1.33
HMGA2-202ENST00000393577 SCUBE2Q9NQ36 999 aa23.33■■□□□ 1.33
HMGA2-202ENST00000393577 HYOU1Q9Y4L1 999 aa23.33■■□□□ 1.33
HMGA2-202ENST00000393577 ACACBO00763 2458 aa23.32■■□□□ 1.32
HMGA2-202ENST00000393577 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.32■■□□□ 1.32
HMGA2-202ENST00000393577 C6P13671 934 aa23.32■■□□□ 1.32
HMGA2-202ENST00000393577 TCEAL1Q15170 157 aa23.32■■□□□ 1.32
HMGA2-202ENST00000393577 ADAMTS14Q8WXS8 1223 aa23.32■■□□□ 1.32
HMGA2-202ENST00000393577 KLK13Q9UKR3 277 aa23.32■■□□□ 1.32
HMGA2-202ENST00000393577 CHD8Q9HCK8 2581 aa23.32■■□□□ 1.32
HMGA2-202ENST00000393577 ARID1BQ8NFD5 2236 aaPredicted RBP23.31■■□□□ 1.32
HMGA2-202ENST00000393577 LCA5LO95447 670 aa23.31■■□□□ 1.32
HMGA2-202ENST00000393577 LDOC1O95751 146 aaPredicted RBP23.31■■□□□ 1.32
HMGA2-202ENST00000393577 KRT1P04264 644 aa23.31■■□□□ 1.32
HMGA2-202ENST00000393577 TNNT1P13805 278 aa23.31■■□□□ 1.32
HMGA2-202ENST00000393577 SLC1A1P43005 524 aa23.31■■□□□ 1.32
HMGA2-202ENST00000393577 PFN3P60673 137 aa23.31■■□□□ 1.32
HMGA2-202ENST00000393577 GBE1Q04446 702 aa23.31■■□□□ 1.32
HMGA2-202ENST00000393577 PDE1CQ14123 709 aaPredicted RBP23.31■■□□□ 1.32
HMGA2-202ENST00000393577 FZD2Q14332 565 aa23.31■■□□□ 1.32
HMGA2-202ENST00000393577 IFI16Q16666 785 aaKnown RBP23.31■■□□□ 1.32
HMGA2-202ENST00000393577 ZNF542PQ5EBM4 170 aa23.31■■□□□ 1.32
HMGA2-202ENST00000393577 TPRG1LQ5T0D9 272 aa23.31■■□□□ 1.32
HMGA2-202ENST00000393577 TIGD7Q6NT04 549 aaPredicted RBP23.31■■□□□ 1.32
HMGA2-202ENST00000393577 CCDC170Q8IYT3 715 aa23.31■■□□□ 1.32
HMGA2-202ENST00000393577 TP53I13Q8NBR0 393 aaPredicted RBP23.31■■□□□ 1.32
HMGA2-202ENST00000393577 CNDP2Q96KP4 475 aaKnown RBP23.31■■□□□ 1.32
HMGA2-202ENST00000393577 RNF157Q96PX1 679 aa23.31■■□□□ 1.32
HMGA2-202ENST00000393577 PANX2Q96RD6 677 aa23.31■■□□□ 1.32
HMGA2-202ENST00000393577 ANP32EQ9BTT0 268 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms