RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 C1QTNF8P60827 252 aa18.99■□□□□ 0.63
CBX1-202ENST00000393408 PDAP1Q13442 181 aaKnown RBP18.99■□□□□ 0.63
CBX1-202ENST00000393408 SEPT6Q14141 434 aa18.99■□□□□ 0.63
CBX1-202ENST00000393408 MAPRE2Q15555 327 aa18.99■□□□□ 0.63
CBX1-202ENST00000393408 FAM83EQ2M2I3 478 aa18.99■□□□□ 0.63
CBX1-202ENST00000393408 MGAT5BQ3V5L5 792 aa18.99■□□□□ 0.63
CBX1-202ENST00000393408 MANEALQ5VSG8 457 aa18.99■□□□□ 0.63
CBX1-202ENST00000393408 KIAA0408Q6ZU52 694 aa18.99■□□□□ 0.63
CBX1-202ENST00000393408 USP50Q70EL3 339 aaPredicted RBP18.99■□□□□ 0.63
CBX1-202ENST00000393408 LZTR1Q8N653 840 aa18.99■□□□□ 0.63
CBX1-202ENST00000393408 BRI3BPQ8WY22 251 aa18.99■□□□□ 0.63
CBX1-202ENST00000393408 TOP1MTQ969P6 601 aa18.99■□□□□ 0.63
CBX1-202ENST00000393408 CCDC126Q96EE4 140 aa18.99■□□□□ 0.63
CBX1-202ENST00000393408 PRKD2Q9BZL6 878 aa18.99■□□□□ 0.63
CBX1-202ENST00000393408 RBM38Q9H0Z9 239 aaKnown RBP18.99■□□□□ 0.63
CBX1-202ENST00000393408 ATXN3LQ9H3M9 355 aa18.99■□□□□ 0.63
CBX1-202ENST00000393408 MRPL40Q9NQ50 206 aaKnown RBP18.99■□□□□ 0.63
CBX1-202ENST00000393408 RBM22Q9NW64 420 aaKnown RBP eCLIP18.99■□□□□ 0.63
CBX1-202ENST00000393408 PCNTO95613 3336 aa18.99■□□□□ 0.63
CBX1-202ENST00000393408 C17orf102A2RUQ5 167 aa18.99■□□□□ 0.63
CBX1-202ENST00000393408 TRIM24O15164 1050 aa18.99■□□□□ 0.63
CBX1-202ENST00000393408 FGF10O15520 208 aaPredicted RBP18.99■□□□□ 0.63
CBX1-202ENST00000393408 IRAK2O43187 625 aa18.99■□□□□ 0.63
CBX1-202ENST00000393408 PAGE1O75459 146 aa18.99■□□□□ 0.63
CBX1-202ENST00000393408 MAP7Q14244 749 aa18.99■□□□□ 0.63
CBX1-202ENST00000393408 FASTKQ14296 549 aaKnown RBP18.99■□□□□ 0.63
CBX1-202ENST00000393408 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.99■□□□□ 0.63
CBX1-202ENST00000393408 ZNF789Q5FWF6 425 aa18.99■□□□□ 0.63
CBX1-202ENST00000393408 IYDQ6PHW0 289 aa18.99■□□□□ 0.63
CBX1-202ENST00000393408 DTNBP1Q96EV8 351 aa18.99■□□□□ 0.63
CBX1-202ENST00000393408 GRIP2Q9C0E4 1043 aa18.99■□□□□ 0.63
CBX1-202ENST00000393408 NDFIP2Q9NV92 336 aa18.99■□□□□ 0.63
CBX1-202ENST00000393408 IPO13O94829 963 aaKnown RBP18.98■□□□□ 0.63
CBX1-202ENST00000393408 MYL3P08590 195 aa18.98■□□□□ 0.63
CBX1-202ENST00000393408 TIGD5Q53EQ6 642 aa18.98■□□□□ 0.63
CBX1-202ENST00000393408 BRMS1LQ5PSV4 323 aa18.98■□□□□ 0.63
CBX1-202ENST00000393408 REP15Q6BDI9 236 aa18.98■□□□□ 0.63
CBX1-202ENST00000393408 KDELC2Q7Z4H8 507 aa18.98■□□□□ 0.63
CBX1-202ENST00000393408 CUZD1Q86UP6 607 aa18.98■□□□□ 0.63
CBX1-202ENST00000393408 AFAP1L2Q8N4X5 818 aa18.98■□□□□ 0.63
CBX1-202ENST00000393408 MPP4Q96JB8 637 aa18.98■□□□□ 0.63
CBX1-202ENST00000393408 PRPF18Q99633 342 aaKnown RBP18.98■□□□□ 0.63
CBX1-202ENST00000393408 PCDHAC1Q9H158 963 aa18.98■□□□□ 0.63
CBX1-202ENST00000393408 CATSPERBQ9H7T0 1116 aa18.98■□□□□ 0.63
CBX1-202ENST00000393408 EML4Q9HC35 981 aaKnown RBP18.98■□□□□ 0.63
CBX1-202ENST00000393408 MYOCOSA0A1B0GUC4 107 aa18.98■□□□□ 0.63
CBX1-202ENST00000393408 PSMD12O00232 456 aaPredicted RBP18.98■□□□□ 0.63
CBX1-202ENST00000393408 UBDO15205 165 aa18.98■□□□□ 0.63
CBX1-202ENST00000393408 ATP6V1B1P15313 513 aa18.98■□□□□ 0.63
CBX1-202ENST00000393408 HTR7P34969 479 aa18.98■□□□□ 0.63
CBX1-202ENST00000393408 PPP1R3AQ16821 1122 aa18.98■□□□□ 0.63
CBX1-202ENST00000393408 AGKQ53H12 422 aa18.98■□□□□ 0.63
CBX1-202ENST00000393408 AGAP9Q5VTM2 703 aa18.98■□□□□ 0.63
CBX1-202ENST00000393408 FAM171BQ6P995 826 aa18.98■□□□□ 0.63
CBX1-202ENST00000393408 KLHDC10Q6PID8 442 aa18.98■□□□□ 0.63
CBX1-202ENST00000393408 PAOXQ6QHF9 649 aa18.98■□□□□ 0.63
CBX1-202ENST00000393408 RPS27LQ71UM5 84 aaKnown RBP18.98■□□□□ 0.63
CBX1-202ENST00000393408 BEND5Q7L4P6 421 aa18.98■□□□□ 0.63
CBX1-202ENST00000393408 RNF135Q8IUD6 432 aa18.98■□□□□ 0.63
CBX1-202ENST00000393408 LPPQ93052 612 aa18.98■□□□□ 0.63
CBX1-202ENST00000393408 PAAF1Q9BRP4 392 aa18.98■□□□□ 0.63
CBX1-202ENST00000393408 FAM105AQ9NUU6 356 aa18.98■□□□□ 0.63
CBX1-202ENST00000393408 AP4S1Q9Y587 144 aa18.98■□□□□ 0.63
CBX1-202ENST00000393408 MIA3Q5JRA6 1907 aa18.97■□□□□ 0.63
CBX1-202ENST00000393408 H0YJX3 145 aa18.97■□□□□ 0.63
CBX1-202ENST00000393408 LTA4HP09960 611 aaKnown RBP18.97■□□□□ 0.63
CBX1-202ENST00000393408 INHBCP55103 352 aa18.97■□□□□ 0.63
CBX1-202ENST00000393408 RHDQ02161 417 aa18.97■□□□□ 0.63
CBX1-202ENST00000393408 MYLK3Q32MK0 819 aa18.97■□□□□ 0.63
CBX1-202ENST00000393408 NOMO2Q5JPE7 1267 aa18.97■□□□□ 0.63
CBX1-202ENST00000393408 ANKRD23Q86SG2 305 aa18.97■□□□□ 0.63
CBX1-202ENST00000393408 TMLHEQ9NVH6 421 aa18.97■□□□□ 0.63
CBX1-202ENST00000393408 MRPL42Q9Y6G3 142 aaKnown RBP18.97■□□□□ 0.63
CBX1-202ENST00000393408 TLL2Q9Y6L7 1015 aa18.97■□□□□ 0.63
CBX1-202ENST00000393408 PATJQ8NI35 1801 aa18.96■□□□□ 0.63
CBX1-202ENST00000393408 CASTOR2A6NHX0 329 aa18.96■□□□□ 0.63
CBX1-202ENST00000393408 HDCP19113 662 aa18.96■□□□□ 0.63
CBX1-202ENST00000393408 LEPRP48357 1165 aaKnown RBP18.96■□□□□ 0.63
CBX1-202ENST00000393408 CLCN5P51795 746 aa18.96■□□□□ 0.63
CBX1-202ENST00000393408 TRAP1Q12931 704 aaKnown RBP18.96■□□□□ 0.63
CBX1-202ENST00000393408 LAMB3Q13751 1172 aa18.96■□□□□ 0.63
CBX1-202ENST00000393408 SLC14A2Q15849 920 aa18.96■□□□□ 0.63
CBX1-202ENST00000393408 AFMIDQ63HM1 303 aa18.96■□□□□ 0.63
CBX1-202ENST00000393408 TIGD7Q6NT04 549 aaPredicted RBP18.96■□□□□ 0.63
CBX1-202ENST00000393408 B3GNT6Q6ZMB0 384 aa18.96■□□□□ 0.63
CBX1-202ENST00000393408 CHERPQ8IWX8 916 aaKnown RBP18.96■□□□□ 0.63
CBX1-202ENST00000393408 SCAMP5Q8TAC9 235 aa18.96■□□□□ 0.63
CBX1-202ENST00000393408 EME1Q96AY2 570 aa18.96■□□□□ 0.63
CBX1-202ENST00000393408 FCRL2Q96LA5 508 aaPredicted RBP18.96■□□□□ 0.63
CBX1-202ENST00000393408 TRIM62Q9BVG3 475 aa18.96■□□□□ 0.63
CBX1-202ENST00000393408 TBC1D13Q9NVG8 400 aa18.96■□□□□ 0.63
CBX1-202ENST00000393408 CCDC167Q9P0B6 97 aa18.96■□□□□ 0.63
CBX1-202ENST00000393408 PADI4Q9UM07 663 aa18.96■□□□□ 0.63
CBX1-202ENST00000393408 HEATR9A2RTY3 570 aa18.96■□□□□ 0.63
CBX1-202ENST00000393408 C7orf72A4D263 438 aa18.96■□□□□ 0.63
CBX1-202ENST00000393408 PRORSD1PA6NEY8 169 aa18.96■□□□□ 0.63
CBX1-202ENST00000393408 RBP1P09455 135 aa18.96■□□□□ 0.63
CBX1-202ENST00000393408 CCDC166P0CW27 439 aa18.96■□□□□ 0.63
CBX1-202ENST00000393408 HOXC8P31273 242 aa18.96■□□□□ 0.63
CBX1-202ENST00000393408 WNT3AP56704 352 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms