RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 EIF2B3Q9NR50 452 aaKnown RBP10.62□□□□□ -0.71
CALD1-203ENST00000393118 FLRT1Q9NZU1 646 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 GMIPQ9P107 970 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 SORCS3Q9UPU3 1222 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 RAP2CQ9Y3L5 183 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 E9PAM4 449 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 F8W8V4 182 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 SERPINF2P08697 491 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 RBP1P09455 135 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 TFEBP19484 476 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 ATN1P54259 1190 aaPredicted RBP10.62□□□□□ -0.71
CALD1-203ENST00000393118 DSC2Q02487 901 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 GALNT3Q14435 633 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 GSTA3Q16772 222 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 PNPLA1Q8N8W4 532 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 CDC26Q8NHZ8 85 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 KCTD13Q8WZ19 329 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 MS4A4AQ96JQ5 239 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 PTPN18Q99952 460 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 DHRS4Q9BTZ2 278 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 TLR8Q9NR97 1041 aaKnown RBP10.62□□□□□ -0.71
CALD1-203ENST00000393118 MOCS1Q9NZB8 636 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 HACD3Q9P035 362 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 SLC2A6Q9UGQ3 507 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 POLR2AP24928 1970 aaKnown RBP10.62□□□□□ -0.71
CALD1-203ENST00000393118 NR5A2O00482 541 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 STX7O15400 261 aaKnown RBP10.62□□□□□ -0.71
CALD1-203ENST00000393118 MAGEB3O15480 346 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 PIK3R1P27986 724 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 CYP2C18P33260 490 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 ZNF135P52742 658 aaPredicted RBP10.62□□□□□ -0.71
CALD1-203ENST00000393118 TAS2R39P59534 338 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 STX5Q13190 355 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 PCLAFQ15004 111 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 PAFAH1B3Q15102 231 aaKnown RBP10.62□□□□□ -0.71
CALD1-203ENST00000393118 SLC9B1Q4ZJI4 515 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 PKDCCQ504Y2 493 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 RGMBQ6NW40 437 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 FBXO27Q8NI29 283 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 NTAN1Q96AB6 310 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 ZYG11BQ9C0D3 744 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 OCEL1Q9H607 264 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 COPS7BQ9H9Q2 264 aaPredicted RBP10.62□□□□□ -0.71
CALD1-203ENST00000393118 CD274Q9NZQ7 290 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 ANKRD6Q9Y2G4 727 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 SSC5DA1L4H1 1573 aa10.62□□□□□ -0.71
CALD1-203ENST00000393118 SLCO1B7G3V0H7 640 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 CABYRO75952 493 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 ZBTB6Q15916 424 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 UBXN11Q5T124 520 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 MBLAC2Q68D91 279 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 PHTF2Q8N3S3 785 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.61□□□□□ -0.71
CALD1-203ENST00000393118 RSPH1Q8WYR4 309 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 RTP4Q96DX8 246 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 OXCT2Q9BYC2 517 aaPredicted RBP10.61□□□□□ -0.71
CALD1-203ENST00000393118 STX18Q9P2W9 335 aaKnown RBP10.61□□□□□ -0.71
CALD1-203ENST00000393118 RNF112Q9ULX5 631 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 ATP11BQ9Y2G3 1177 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 SNX13Q9Y5W8 968 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 PRRG1O14668 218 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 KLF11O14901 512 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 PBX3P40426 434 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 TAF10Q12962 218 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 FASTKQ14296 549 aaKnown RBP10.61□□□□□ -0.71
CALD1-203ENST00000393118 PDK3Q15120 406 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 PFKFB4Q16877 469 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 POTEHQ6S545 545 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 AGMOQ6ZNB7 445 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 C16orf59Q7L2K0 433 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 PDZD8Q8NEN9 1154 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 LPCAT1Q8NF37 534 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 OR52B2Q96RD2 323 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 PIF1Q9H611 641 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 WDR41Q9HAD4 459 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 GTF2IRD1Q9UHL9 959 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 NME7Q9Y5B8 376 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 SLC30A1Q9Y6M5 507 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.61□□□□□ -0.71
CALD1-203ENST00000393118 SMIM31A0A1B0GVY4 71 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 GABBR2O75899 941 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 OR6B1O95007 311 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 MYL4P12829 197 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 SLC11A2P49281 568 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 CXCR3P49682 368 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 OXCT1P55809 520 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 CRHR2Q13324 411 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 ZNF177Q13360 481 aaPredicted RBP10.61□□□□□ -0.71
CALD1-203ENST00000393118 ITGA7Q13683 1181 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 INAQ16352 499 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 FUT11Q495W5 492 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 BRMS1LQ5PSV4 323 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 CYP4V2Q6ZWL3 525 aaPredicted RBP10.61□□□□□ -0.71
CALD1-203ENST00000393118 OR6Y1Q8NGX8 325 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 DGCR14Q96DF8 476 aaKnown RBP10.61□□□□□ -0.71
CALD1-203ENST00000393118 NPAS2Q99743 824 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 GPR63Q9BZJ6 419 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 MID1IP1Q9NPA3 183 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 NMRK2Q9NPI5 230 aa10.61□□□□□ -0.71
CALD1-203ENST00000393118 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.61□□□□□ -0.712e-6■■■□□ 14.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms