RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 CILP2Q8IUL8 1156 aa25.78■■□□□ 1.72
SMARCD3-203ENST00000392811 HDAC10Q969S8 669 aa25.78■■□□□ 1.72
SMARCD3-203ENST00000392811 MRPL46Q9H2W6 279 aaKnown RBP25.78■■□□□ 1.72
SMARCD3-203ENST00000392811 ZFP37Q9Y6Q3 630 aaPredicted RBP25.78■■□□□ 1.72
SMARCD3-203ENST00000392811 TANC1Q9C0D5 1861 aa25.78■■□□□ 1.72
SMARCD3-203ENST00000392811 MEI4A8MW99 385 aa25.78■■□□□ 1.72
SMARCD3-203ENST00000392811 CXCL10P02778 98 aa25.78■■□□□ 1.72
SMARCD3-203ENST00000392811 HOXD9P28356 352 aaPredicted RBP25.78■■□□□ 1.72
SMARCD3-203ENST00000392811 TUFMP49411 452 aaKnown RBP25.78■■□□□ 1.72
SMARCD3-203ENST00000392811 DEFB128Q7Z7B8 93 aa25.78■■□□□ 1.72
SMARCD3-203ENST00000392811 SPNS2Q8IVW8 549 aa25.78■■□□□ 1.72
SMARCD3-203ENST00000392811 POU5F2Q8N7G0 328 aa25.78■■□□□ 1.72
SMARCD3-203ENST00000392811 OR52K2Q8NGK3 314 aa25.78■■□□□ 1.72
SMARCD3-203ENST00000392811 OR6P1Q8NGX9 317 aa25.78■■□□□ 1.72
SMARCD3-203ENST00000392811 IFT43Q96FT9 208 aa25.78■■□□□ 1.72
SMARCD3-203ENST00000392811 FEM1CQ96JP0 617 aa25.78■■□□□ 1.72
SMARCD3-203ENST00000392811 FAM161BQ96MY7 647 aa25.78■■□□□ 1.72
SMARCD3-203ENST00000392811 MFSD1Q9H3U5 465 aa25.78■■□□□ 1.72
SMARCD3-203ENST00000392811 HIPK3Q9H422 1215 aa25.78■■□□□ 1.72
SMARCD3-203ENST00000392811 IGSF5Q9NSI5 407 aa25.78■■□□□ 1.72
SMARCD3-203ENST00000392811 ZNF840PA6NDX5 716 aa25.77■■□□□ 1.72
SMARCD3-203ENST00000392811 MATN2O00339 956 aa25.77■■□□□ 1.72
SMARCD3-203ENST00000392811 CPOXP36551 454 aa25.77■■□□□ 1.72
SMARCD3-203ENST00000392811 RPL14P50914 215 aaKnown RBP25.77■■□□□ 1.72
SMARCD3-203ENST00000392811 GNA12Q03113 381 aa25.77■■□□□ 1.72
SMARCD3-203ENST00000392811 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.77■■□□□ 1.72
SMARCD3-203ENST00000392811 OR7D4Q8NG98 312 aa25.77■■□□□ 1.72
SMARCD3-203ENST00000392811 CEP295NLQ96MC4 621 aa25.77■■□□□ 1.72
SMARCD3-203ENST00000392811 ZNF599Q96NL3 588 aa25.77■■□□□ 1.72
SMARCD3-203ENST00000392811 MRPL57Q9BQC6 102 aaKnown RBP25.77■■□□□ 1.72
SMARCD3-203ENST00000392811 BACE2Q9Y5Z0 518 aa25.77■■□□□ 1.72
SMARCD3-203ENST00000392811 ACTL7AQ9Y615 435 aa25.77■■□□□ 1.72
SMARCD3-203ENST00000392811 VGLL3A8MV65 326 aa25.76■■□□□ 1.72
SMARCD3-203ENST00000392811 TM7SF2O76062 418 aa25.76■■□□□ 1.72
SMARCD3-203ENST00000392811 SEC24AO95486 1093 aa25.76■■□□□ 1.72
SMARCD3-203ENST00000392811 SLC11A2P49281 568 aa25.76■■□□□ 1.72
SMARCD3-203ENST00000392811 CCNG1P51959 295 aa25.76■■□□□ 1.72
SMARCD3-203ENST00000392811 PRAMEP78395 509 aa25.76■■□□□ 1.72
SMARCD3-203ENST00000392811 LDB1Q86U70 411 aaPredicted RBP25.76■■□□□ 1.72
SMARCD3-203ENST00000392811 SCUBE1Q8IWY4 988 aa25.76■■□□□ 1.72
SMARCD3-203ENST00000392811 LSMEM2Q8N112 164 aa25.76■■□□□ 1.72
SMARCD3-203ENST00000392811 PDZD8Q8NEN9 1154 aa25.76■■□□□ 1.72
SMARCD3-203ENST00000392811 OR52B2Q96RD2 323 aa25.76■■□□□ 1.72
SMARCD3-203ENST00000392811 THTPAQ9BU02 230 aa25.76■■□□□ 1.72
SMARCD3-203ENST00000392811 PPP1R12CQ9BZL4 782 aa25.76■■□□□ 1.72
SMARCD3-203ENST00000392811 MAGEH1Q9H213 219 aa25.76■■□□□ 1.72
SMARCD3-203ENST00000392811 MARCH4Q9P2E8 410 aaPredicted RBP25.76■■□□□ 1.72
SMARCD3-203ENST00000392811 CHD5Q8TDI0 1954 aa25.76■■□□□ 1.71
SMARCD3-203ENST00000392811 OR51F1A6NGY5 319 aa25.76■■□□□ 1.71
SMARCD3-203ENST00000392811 E9PBE3 544 aa25.76■■□□□ 1.71
SMARCD3-203ENST00000392811 COCHO43405 550 aa25.76■■□□□ 1.71
SMARCD3-203ENST00000392811 KLHL41O60662 606 aa25.76■■□□□ 1.71
SMARCD3-203ENST00000392811 ATN1P54259 1190 aaPredicted RBP25.76■■□□□ 1.71
SMARCD3-203ENST00000392811 RPS24P62847 133 aaKnown RBP25.76■■□□□ 1.71
SMARCD3-203ENST00000392811 PRKAA1Q13131 559 aa25.76■■□□□ 1.71
SMARCD3-203ENST00000392811 CSHL1Q14406 222 aa25.76■■□□□ 1.71
SMARCD3-203ENST00000392811 HECTD3Q5T447 861 aa25.76■■□□□ 1.71
SMARCD3-203ENST00000392811 GALNT7Q86SF2 657 aa25.76■■□□□ 1.71
SMARCD3-203ENST00000392811 DENND1CQ8IV53 801 aa25.76■■□□□ 1.71
SMARCD3-203ENST00000392811 PHTF2Q8N3S3 785 aa25.76■■□□□ 1.71
SMARCD3-203ENST00000392811 SGF29Q96ES7 293 aa25.76■■□□□ 1.71
SMARCD3-203ENST00000392811 CLPTM1LQ96KA5 538 aa25.76■■□□□ 1.71
SMARCD3-203ENST00000392811 DEFB118Q96PH6 123 aa25.76■■□□□ 1.71
SMARCD3-203ENST00000392811 TRIM17Q9Y577 477 aa25.76■■□□□ 1.71
SMARCD3-203ENST00000392811 H3BNC9 293 aa25.75■■□□□ 1.71
SMARCD3-203ENST00000392811 HMGA1P17096 107 aaKnown RBP25.75■■□□□ 1.71
SMARCD3-203ENST00000392811 HLA-DPA1P20036 260 aa25.75■■□□□ 1.71
SMARCD3-203ENST00000392811 MAP2K2P36507 400 aa25.75■■□□□ 1.71
SMARCD3-203ENST00000392811 KPNA2P52292 529 aaKnown RBP25.75■■□□□ 1.71
SMARCD3-203ENST00000392811 GALNT3Q14435 633 aa25.75■■□□□ 1.71
SMARCD3-203ENST00000392811 HECTD2Q5U5R9 776 aa25.75■■□□□ 1.71
SMARCD3-203ENST00000392811 IL31Q6EBC2 164 aa25.75■■□□□ 1.71
SMARCD3-203ENST00000392811 ULK2Q8IYT8 1036 aa25.75■■□□□ 1.71
SMARCD3-203ENST00000392811 RNF168Q8IYW5 571 aaPredicted RBP25.75■■□□□ 1.71
SMARCD3-203ENST00000392811 OVCA2Q8WZ82 227 aa25.75■■□□□ 1.71
SMARCD3-203ENST00000392811 SHCBP1LQ9BZQ2 653 aa25.75■■□□□ 1.71
SMARCD3-203ENST00000392811 CWH43Q9H720 699 aa25.75■■□□□ 1.71
SMARCD3-203ENST00000392811 ZDHHC2Q9UIJ5 367 aa25.75■■□□□ 1.71
SMARCD3-203ENST00000392811 HDAC3O15379 428 aa25.75■■□□□ 1.71
SMARCD3-203ENST00000392811 DCXO43602 365 aa25.75■■□□□ 1.71
SMARCD3-203ENST00000392811 ZBTB14O43829 449 aa25.75■■□□□ 1.71
SMARCD3-203ENST00000392811 S1PR4O95977 384 aa25.75■■□□□ 1.71
SMARCD3-203ENST00000392811 FGF1P05230 155 aa25.75■■□□□ 1.71
SMARCD3-203ENST00000392811 COPAP53621 1224 aa25.75■■□□□ 1.71
SMARCD3-203ENST00000392811 CDH4P55283 916 aa25.75■■□□□ 1.71
SMARCD3-203ENST00000392811 ALG1LQ6GMV1 187 aa25.75■■□□□ 1.71
SMARCD3-203ENST00000392811 TLDC1Q6P9B6 456 aa25.75■■□□□ 1.71
SMARCD3-203ENST00000392811 TXNDC5Q8NBS9 432 aaKnown RBP25.75■■□□□ 1.71
SMARCD3-203ENST00000392811 BLOC1S5Q8TDH9 187 aa25.75■■□□□ 1.71
SMARCD3-203ENST00000392811 IGSF21Q96ID5 467 aa25.75■■□□□ 1.71
SMARCD3-203ENST00000392811 PRICKLE1Q96MT3 831 aaPredicted RBP25.75■■□□□ 1.71
SMARCD3-203ENST00000392811 CLSTN3Q9BQT9 956 aa25.75■■□□□ 1.71
SMARCD3-203ENST00000392811 TCF7L2Q9NQB0 619 aa25.75■■□□□ 1.71
SMARCD3-203ENST00000392811 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP25.75■■□□□ 1.71
SMARCD3-203ENST00000392811 GRID2O43424 1007 aa25.74■■□□□ 1.71
SMARCD3-203ENST00000392811 KRT36O76013 467 aa25.74■■□□□ 1.71
SMARCD3-203ENST00000392811 EPOP01588 193 aa25.74■■□□□ 1.71
SMARCD3-203ENST00000392811 KLKB1P03952 638 aa25.74■■□□□ 1.71
SMARCD3-203ENST00000392811 TFEBP19484 476 aa25.74■■□□□ 1.71
SMARCD3-203ENST00000392811 HK2P52789 917 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms