RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 EFHD1Q9BUP0 239 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 OXSMQ9NWU1 459 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 ZNF839A8K0R7 811 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 TMEM114B3SHH9 223 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 C9JVG2 144 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 MATN2O00339 956 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 ZNF195O14628 629 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 TRMUO75648 421 aaKnown RBP10.94□□□□□ -0.66
BRF1-204ENST00000392557 RNASEH2AO75792 299 aaKnown RBP10.94□□□□□ -0.66
BRF1-204ENST00000392557 STMN1P16949 149 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 CKMT2P17540 419 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 MYBPC1Q00872 1141 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 RPS6KA2Q15349 733 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 STEAP4Q687X5 459 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 KLC3Q6P597 504 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 OTOP3Q7RTS5 596 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 ZNF280BQ86YH2 543 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 SPATA2LQ8IUW3 424 aaPredicted RBP10.94□□□□□ -0.66
BRF1-204ENST00000392557 LILRA2Q8N149 483 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 AFAP1L2Q8N4X5 818 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 SPATA22Q8NHS9 363 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 B3GALT6Q96L58 329 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 FAM193BQ96PV7 902 aaPredicted RBP10.94□□□□□ -0.66
BRF1-204ENST00000392557 SLC39A3Q9BRY0 314 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 UPF3AQ9H1J1 476 aaKnown RBP10.94□□□□□ -0.66
BRF1-204ENST00000392557 OR12D3Q9UGF7 316 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 SFMBT1Q9UHJ3 866 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 RAB26Q9ULW5 256 aa10.94□□□□□ -0.66
BRF1-204ENST00000392557 COPG1Q9Y678 874 aaKnown RBP10.94□□□□□ -0.66
BRF1-204ENST00000392557 A0A0U1RQF3 1178 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 TIPRLO75663 272 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 PTPN3P26045 913 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 RPL10P27635 214 aaKnown RBP10.93□□□□□ -0.66
BRF1-204ENST00000392557 MAPK10P53779 464 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 NR1H2P55055 460 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 NAB1Q13506 487 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 SLC39A12Q504Y0 691 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 GLB1LQ6UWU2 654 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 PGAM4Q8N0Y7 254 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 THEM5Q8N1Q8 247 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 ADCY4Q8NFM4 1077 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 DDI1Q8WTU0 396 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 COLEC11Q9BWP8 271 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 FSD1LQ9BXM9 530 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 POMKQ9H5K3 350 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 NCKIPSDQ9NZQ3 722 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 TMCO1Q9UM00 188 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 DMTF1Q9Y222 760 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 I6L893 689 aaPredicted RBP10.93□□□□□ -0.66
BRF1-204ENST00000392557 VILLO15195 856 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 FBXO21O94952 628 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 PRKCGP05129 697 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 TUSC3Q13454 348 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 FASTKQ14296 549 aaKnown RBP10.93□□□□□ -0.66
BRF1-204ENST00000392557 ITPRIPL1Q6GPH6 555 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 CLVS1Q8IUQ0 354 aaPredicted RBP10.93□□□□□ -0.66
BRF1-204ENST00000392557 MARVELD2Q8N4S9 558 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 PCSK9Q8NBP7 692 aaKnown RBP10.93□□□□□ -0.66
BRF1-204ENST00000392557 CYGBQ8WWM9 190 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 TMIGD2Q96BF3 282 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 KLHL32Q96NJ5 620 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 FTHL17Q9BXU8 183 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 CNGB3Q9NQW8 809 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 RALGAPA2Q2PPJ7 1873 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 XIRP2A4UGR9 3374 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 FAM149AA5PLN7 773 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 MT-CYBP00156 380 aaPredicted RBP10.93□□□□□ -0.66
BRF1-204ENST00000392557 SLC4A1P02730 911 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 SMIM18P0DKX4 95 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 PCSK6P29122 969 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 RPL9P32969 192 aaKnown RBP10.93□□□□□ -0.66
BRF1-204ENST00000392557 HSPA13P48723 471 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 ACLYP53396 1101 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 STX1BP61266 288 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 YWHAHQ04917 246 aaPredicted RBP10.93□□□□□ -0.66
BRF1-204ENST00000392557 DCTN2Q13561 401 aaKnown RBP10.93□□□□□ -0.66
BRF1-204ENST00000392557 SLC12A1Q13621 1099 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 C16orf72Q14CZ0 275 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 ZNF423Q2M1K9 1284 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 BTBD8Q5XKL5 378 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 ZNF280DQ6N043 979 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 TAC4Q86UU9 113 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 KCTD13Q8WZ19 329 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 HDAC11Q96DB2 347 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 RMND5BQ96G75 393 aaPredicted RBP10.93□□□□□ -0.66
BRF1-204ENST00000392557 RTP3Q9BQQ7 232 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 ADAM28Q9UKQ2 775 aa10.93□□□□□ -0.66
BRF1-204ENST00000392557 TDRKHQ9Y2W6 561 aaKnown RBP10.93□□□□□ -0.66
BRF1-204ENST00000392557 GOLGA8CPA6NN73 597 aa10.92□□□□□ -0.66
BRF1-204ENST00000392557 GIPC1O14908 333 aa10.92□□□□□ -0.66
BRF1-204ENST00000392557 UBDO15205 165 aa10.92□□□□□ -0.66
BRF1-204ENST00000392557 MAGEB3O15480 346 aa10.92□□□□□ -0.66
BRF1-204ENST00000392557 TOMM70O94826 608 aa10.92□□□□□ -0.66
BRF1-204ENST00000392557 AP2A1O95782 977 aa10.92□□□□□ -0.66
BRF1-204ENST00000392557 APOA4P06727 396 aa10.92□□□□□ -0.66
BRF1-204ENST00000392557 PRDX6P30041 224 aa10.92□□□□□ -0.66
BRF1-204ENST00000392557 GRIA3P42263 894 aa10.92□□□□□ -0.66
BRF1-204ENST00000392557 MGAT3Q09327 533 aa10.92□□□□□ -0.66
BRF1-204ENST00000392557 FAM83EQ2M2I3 478 aa10.92□□□□□ -0.66
BRF1-204ENST00000392557 TBC1D25Q3MII6 688 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms