RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 GGT7Q9UJ14 662 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 MTO1Q9Y2Z2 717 aaKnown RBP11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 HCFC2Q9Y5Z7 792 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 ATXN2Q99700 1313 aaKnown RBP11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 NUP210Q8TEM1 1887 aaPredicted RBP11.53□□□□□ -0.56
SMARCAL1-203ENST00000392128 ZNF197O14709 1029 aa11.53□□□□□ -0.56
SMARCAL1-203ENST00000392128 PER2O15055 1255 aa11.53□□□□□ -0.56
SMARCAL1-203ENST00000392128 SLC7A4O43246 635 aa11.53□□□□□ -0.56
SMARCAL1-203ENST00000392128 MPOP05164 745 aa11.53□□□□□ -0.56
SMARCAL1-203ENST00000392128 POLD2P49005 469 aa11.53□□□□□ -0.56
SMARCAL1-203ENST00000392128 CSRP3P50461 194 aa11.53□□□□□ -0.56
SMARCAL1-203ENST00000392128 PLK1P53350 603 aa11.53□□□□□ -0.56
SMARCAL1-203ENST00000392128 LMAN2Q12907 356 aa11.53□□□□□ -0.56
SMARCAL1-203ENST00000392128 SLC12A1Q13621 1099 aa11.53□□□□□ -0.56
SMARCAL1-203ENST00000392128 NEPROQ6NW34 567 aa11.53□□□□□ -0.56
SMARCAL1-203ENST00000392128 NCEH1Q6PIU2 408 aa11.53□□□□□ -0.56
SMARCAL1-203ENST00000392128 C6orf89Q6UWU4 347 aa11.53□□□□□ -0.56
SMARCAL1-203ENST00000392128 APCDD1Q8J025 514 aa11.53□□□□□ -0.56
SMARCAL1-203ENST00000392128 ANKS4BQ8N8V4 417 aa11.53□□□□□ -0.56
SMARCAL1-203ENST00000392128 RIN3Q8TB24 985 aa11.53□□□□□ -0.56
SMARCAL1-203ENST00000392128 ZNF707Q96C28 371 aaPredicted RBP11.53□□□□□ -0.56
SMARCAL1-203ENST00000392128 LMLNQ96KR4 655 aa11.53□□□□□ -0.56
SMARCAL1-203ENST00000392128 GEMIN8Q9NWZ8 242 aaKnown RBP11.53□□□□□ -0.56
SMARCAL1-203ENST00000392128 PLK2Q9NYY3 685 aa11.53□□□□□ -0.56
SMARCAL1-203ENST00000392128 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.53□□□□□ -0.56
SMARCAL1-203ENST00000392128 CHD7Q9P2D1 2997 aa11.53□□□□□ -0.56
SMARCAL1-203ENST00000392128 STARD13Q9Y3M8 1113 aa11.53□□□□□ -0.56
SMARCAL1-203ENST00000392128 CCDC195A0A1B0GUA6 201 aa11.52□□□□□ -0.56
SMARCAL1-203ENST00000392128 EDF1O60869 148 aaKnown RBP11.52□□□□□ -0.56
SMARCAL1-203ENST00000392128 PAPLNO95428 1278 aa11.52□□□□□ -0.56
SMARCAL1-203ENST00000392128 PRLP01236 227 aa11.52□□□□□ -0.56
SMARCAL1-203ENST00000392128 AHSGP02765 367 aa11.52□□□□□ -0.56
SMARCAL1-203ENST00000392128 GABRB3P28472 473 aa11.52□□□□□ -0.56
SMARCAL1-203ENST00000392128 SLC1A2P43004 574 aa11.52□□□□□ -0.56
SMARCAL1-203ENST00000392128 RHOAP61586 193 aa11.52□□□□□ -0.56
SMARCAL1-203ENST00000392128 ZNF77Q15935 545 aa11.52□□□□□ -0.56
SMARCAL1-203ENST00000392128 DBN1Q16643 649 aa11.52□□□□□ -0.56
SMARCAL1-203ENST00000392128 ZNF470Q6ECI4 717 aa11.52□□□□□ -0.56
SMARCAL1-203ENST00000392128 GRASPQ7Z6J2 395 aaPredicted RBP11.52□□□□□ -0.56
SMARCAL1-203ENST00000392128 GALNT7Q86SF2 657 aa11.52□□□□□ -0.56
SMARCAL1-203ENST00000392128 METTL3Q86U44 580 aaKnown RBP11.52□□□□□ -0.56
SMARCAL1-203ENST00000392128 DENND6AQ8IWF6 608 aa11.52□□□□□ -0.56
SMARCAL1-203ENST00000392128 LMNTD2Q8IXW0 634 aa11.52□□□□□ -0.56
SMARCAL1-203ENST00000392128 ATXN7L3BQ96GX2 97 aa11.52□□□□□ -0.56
SMARCAL1-203ENST00000392128 MFSD1Q9H3U5 465 aa11.52□□□□□ -0.56
SMARCAL1-203ENST00000392128 MANSC1Q9H8J5 431 aa11.52□□□□□ -0.56
SMARCAL1-203ENST00000392128 CLEC4EQ9ULY5 219 aa11.52□□□□□ -0.56
SMARCAL1-203ENST00000392128 PHTF1Q9UMS5 762 aa11.52□□□□□ -0.56
SMARCAL1-203ENST00000392128 CHKBQ9Y259 395 aa11.52□□□□□ -0.56
SMARCAL1-203ENST00000392128 YBX2Q9Y2T7 364 aaKnown RBP11.52□□□□□ -0.56
SMARCAL1-203ENST00000392128 RAI2Q9Y5P3 530 aa11.52□□□□□ -0.56
SMARCAL1-203ENST00000392128 CDH23Q9H251 3354 aa11.52□□□□□ -0.56
SMARCAL1-203ENST00000392128 WDR91A4D1P6 747 aa11.52□□□□□ -0.57
SMARCAL1-203ENST00000392128 KLF11O14901 512 aa11.52□□□□□ -0.57
SMARCAL1-203ENST00000392128 BIRC5O15392 142 aa11.52□□□□□ -0.57
SMARCAL1-203ENST00000392128 PRAMEF12O95522 483 aa11.52□□□□□ -0.57
SMARCAL1-203ENST00000392128 PENKP01210 267 aaPredicted RBP11.52□□□□□ -0.57
SMARCAL1-203ENST00000392128 GSTA1P08263 222 aa11.52□□□□□ -0.57
SMARCAL1-203ENST00000392128 F7P08709 466 aaPredicted RBP11.52□□□□□ -0.57
SMARCAL1-203ENST00000392128 MAGEA10P43363 369 aaPredicted RBP11.52□□□□□ -0.57
SMARCAL1-203ENST00000392128 NTHL1P78549 312 aa11.52□□□□□ -0.57
SMARCAL1-203ENST00000392128 MPP1Q00013 466 aa11.52□□□□□ -0.57
SMARCAL1-203ENST00000392128 USP4Q13107 963 aa11.52□□□□□ -0.57
SMARCAL1-203ENST00000392128 CTBP1Q13363 440 aa11.52□□□□□ -0.57
SMARCAL1-203ENST00000392128 GRM3Q14832 879 aa11.52□□□□□ -0.57
SMARCAL1-203ENST00000392128 PLEKHG6Q3KR16 790 aa11.52□□□□□ -0.57
SMARCAL1-203ENST00000392128 CGB2Q6NT52 195 aa11.52□□□□□ -0.57
SMARCAL1-203ENST00000392128 FAM47EQ6ZV65 393 aa11.52□□□□□ -0.57
SMARCAL1-203ENST00000392128 CMC1Q7Z7K0 106 aa11.52□□□□□ -0.57
SMARCAL1-203ENST00000392128 RNF135Q8IUD6 432 aa11.52□□□□□ -0.57
SMARCAL1-203ENST00000392128 TRIM42Q8IWZ5 723 aa11.52□□□□□ -0.57
SMARCAL1-203ENST00000392128 ARMC2Q8NEN0 867 aa11.52□□□□□ -0.57
SMARCAL1-203ENST00000392128 BLOC1S5Q8TDH9 187 aa11.52□□□□□ -0.57
SMARCAL1-203ENST00000392128 ADGRE3Q9BY15 652 aa11.52□□□□□ -0.57
SMARCAL1-203ENST00000392128 TBC1D14Q9P2M4 693 aa11.52□□□□□ -0.57
SMARCAL1-203ENST00000392128 FBXO5Q9UKT4 447 aa11.52□□□□□ -0.57
SMARCAL1-203ENST00000392128 FCF1Q9Y324 198 aaKnown RBP11.52□□□□□ -0.57
SMARCAL1-203ENST00000392128 USP15Q9Y4E8 981 aaPredicted RBP11.52□□□□□ -0.57
SMARCAL1-203ENST00000392128 MYOFQ9NZM1 2061 aa11.52□□□□□ -0.57
SMARCAL1-203ENST00000392128 TOP3BO95985 862 aaKnown RBP11.51□□□□□ -0.57
SMARCAL1-203ENST00000392128 CD70P32970 193 aa11.51□□□□□ -0.57
SMARCAL1-203ENST00000392128 AP1S1P61966 158 aa11.51□□□□□ -0.57
SMARCAL1-203ENST00000392128 PPM1JQ5JR12 505 aa11.51□□□□□ -0.57
SMARCAL1-203ENST00000392128 ZNF697Q5TEC3 545 aa11.51□□□□□ -0.57
SMARCAL1-203ENST00000392128 SPATA21Q7Z572 469 aa11.51□□□□□ -0.57
SMARCAL1-203ENST00000392128 ADGRD2Q7Z7M1 963 aa11.51□□□□□ -0.57
SMARCAL1-203ENST00000392128 CLEC14AQ86T13 490 aa11.51□□□□□ -0.57
SMARCAL1-203ENST00000392128 RAB3IL1Q8TBN0 382 aa11.51□□□□□ -0.57
SMARCAL1-203ENST00000392128 STYXQ8WUJ0 223 aa11.51□□□□□ -0.57
SMARCAL1-203ENST00000392128 SLCO1B3Q9NPD5 702 aa11.51□□□□□ -0.57
SMARCAL1-203ENST00000392128 ABCB8Q9NUT2 735 aa11.51□□□□□ -0.57
SMARCAL1-203ENST00000392128 EMCNQ9ULC0 261 aa11.51□□□□□ -0.57
SMARCAL1-203ENST00000392128 ARL5AQ9Y689 179 aa11.51□□□□□ -0.57
SMARCAL1-203ENST00000392128 CHD9Q3L8U1 2897 aa11.51□□□□□ -0.57
SMARCAL1-203ENST00000392128 A0A096LPK6 155 aa11.51□□□□□ -0.57
SMARCAL1-203ENST00000392128 CRTAMO95727 393 aa11.51□□□□□ -0.57
SMARCAL1-203ENST00000392128 MT-CO1P00395 513 aa11.51□□□□□ -0.57
SMARCAL1-203ENST00000392128 IL1BP01584 269 aa11.51□□□□□ -0.57
SMARCAL1-203ENST00000392128 PRKCGP05129 697 aa11.51□□□□□ -0.57
SMARCAL1-203ENST00000392128 PSMA3P25788 255 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms