RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 DYNC1LI2O43237 492 aaPredicted RBP16.25■□□□□ 0.19
SHANK1-204ENST00000391814 NFKB1P19838 968 aa16.25■□□□□ 0.19
SHANK1-204ENST00000391814 CDH8P55286 799 aa16.25■□□□□ 0.19
SHANK1-204ENST00000391814 TNFAIP8L3Q5GJ75 292 aa16.25■□□□□ 0.19
SHANK1-204ENST00000391814 RNF44Q7L0R7 432 aa16.25■□□□□ 0.19
SHANK1-204ENST00000391814 LPAR1Q92633 364 aa16.25■□□□□ 0.19
SHANK1-204ENST00000391814 OR6A2O95222 327 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 RLN1P04808 185 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 PGRP06401 933 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 SH3D19Q5HYK7 790 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 APOBEC3FQ8IUX4 373 aaKnown RBP16.24■□□□□ 0.19
SHANK1-204ENST00000391814 RAET1EQ8TD07 263 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 STARD8Q92502 1023 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 TRIT1Q9H3H1 467 aaKnown RBP16.24■□□□□ 0.19
SHANK1-204ENST00000391814 ACSS3Q9H6R3 686 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 OR5F1O95221 314 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 IGFBP5P24593 272 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 CEBPGP53567 150 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 GMFBP60983 142 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 HKDC1Q2TB90 917 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 PCID2Q5JVF3 399 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 P2RY8Q86VZ1 359 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 SP8Q8IXZ3 490 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 MOXD2PA6NHM9 499 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 MAPTP10636 758 aaKnown RBP16.24■□□□□ 0.19
SHANK1-204ENST00000391814 CCNB1P14635 433 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 KLRK1P26718 216 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 AP5B1Q2VPB7 878 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 RALGPS2Q86X27 583 aaPredicted RBP16.24■□□□□ 0.19
SHANK1-204ENST00000391814 IL22Q9GZX6 179 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 AHSPQ9NZD4 102 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 PDP1Q9P0J1 537 aaPredicted RBP16.24■□□□□ 0.19
SHANK1-204ENST00000391814 OR10H3O60404 316 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 SUPT20HL2P0C7V6 817 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 THRBP10828 461 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 YBX3P16989 372 aaKnown RBP eCLIP16.24■□□□□ 0.19
SHANK1-204ENST00000391814 PRKCIP41743 596 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 TUBP50607 506 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 SLC6A3Q01959 620 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 OR52L1Q8NGH7 329 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 EPS8L1Q8TE68 723 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 LPGAT1Q92604 370 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 PIGKQ92643 395 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 REPS1Q96D71 796 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 COQ10BQ9H8M1 238 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 CYP3A43Q9HB55 503 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 EIF3KQ9UBQ5 218 aaKnown RBP16.24■□□□□ 0.19
SHANK1-204ENST00000391814 PLLPQ9Y342 182 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 TSPOAP1O95153 1857 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 CLUHO75153 1309 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 SLC12A8A0AV02 714 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 ANKRD63C9JTQ0 380 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 CLCN3P51790 818 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 ANGEL2Q5VTE6 544 aaKnown RBP16.24■□□□□ 0.19
SHANK1-204ENST00000391814 TUBA3EQ6PEY2 450 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 SLC30A10Q6XR72 485 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 TOP1MTQ969P6 601 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 SMPD3Q9NY59 655 aaPredicted RBP16.24■□□□□ 0.19
SHANK1-204ENST00000391814 VPS4AQ9UN37 437 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 SALL3Q9BXA9 1300 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 A8MX80 341 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 ITGA2P17301 1181 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 CXorf57Q6NSI4 855 aaKnown RBP16.24■□□□□ 0.19
SHANK1-204ENST00000391814 TMEM139Q8IV31 216 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 CBR4Q8N4T8 237 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 ELP3Q9H9T3 547 aa16.24■□□□□ 0.19
SHANK1-204ENST00000391814 NPHP4O75161 1426 aaPredicted RBP16.23■□□□□ 0.19
SHANK1-204ENST00000391814 CDC40O60508 579 aaKnown RBP eCLIP16.23■□□□□ 0.19
SHANK1-204ENST00000391814 GCNT1Q02742 428 aa16.23■□□□□ 0.19
SHANK1-204ENST00000391814 RASGEF1CQ8N431 466 aa16.23■□□□□ 0.19
SHANK1-204ENST00000391814 TBCBQ99426 244 aa16.23■□□□□ 0.19
SHANK1-204ENST00000391814 RBM4BQ9BQ04 359 aaKnown RBP16.23■□□□□ 0.19
SHANK1-204ENST00000391814 RBM4Q9BWF3 364 aaKnown RBP16.23■□□□□ 0.19
SHANK1-204ENST00000391814 AGXT2Q9BYV1 514 aa16.23■□□□□ 0.19
SHANK1-204ENST00000391814 LNPEPQ9UIQ6 1025 aa16.23■□□□□ 0.19
SHANK1-204ENST00000391814 MAGEL2Q9UJ55 1249 aa16.23■□□□□ 0.19
SHANK1-204ENST00000391814 VPS28Q9UK41 221 aa16.23■□□□□ 0.19
SHANK1-204ENST00000391814 A0A0A0MRY4 1105 aa16.23■□□□□ 0.19
SHANK1-204ENST00000391814 E5RJQ4 531 aa16.23■□□□□ 0.19
SHANK1-204ENST00000391814 LRATO95237 230 aa16.23■□□□□ 0.19
SHANK1-204ENST00000391814 HNF4AP41235 474 aa16.23■□□□□ 0.19
SHANK1-204ENST00000391814 ADGRE1Q14246 886 aa16.23■□□□□ 0.19
SHANK1-204ENST00000391814 ADGRA1Q86SQ6 560 aa16.23■□□□□ 0.19
SHANK1-204ENST00000391814 ACMSDQ8TDX5 336 aa16.23■□□□□ 0.19
SHANK1-204ENST00000391814 SPATA13Q96N96 652 aa16.23■□□□□ 0.19
SHANK1-204ENST00000391814 CHCHD6Q9BRQ6 235 aa16.23■□□□□ 0.19
SHANK1-204ENST00000391814 SLC28A1O00337 649 aa16.23■□□□□ 0.19
SHANK1-204ENST00000391814 TEX28O15482 410 aa16.23■□□□□ 0.19
SHANK1-204ENST00000391814 MT-ND1P03886 318 aa16.23■□□□□ 0.19
SHANK1-204ENST00000391814 CRHR1P34998 444 aa16.23■□□□□ 0.19
SHANK1-204ENST00000391814 RAPSNQ13702 412 aa16.23■□□□□ 0.19
SHANK1-204ENST00000391814 IL17AQ16552 155 aa16.23■□□□□ 0.19
SHANK1-204ENST00000391814 NADK2Q4G0N4 442 aa16.23■□□□□ 0.19
SHANK1-204ENST00000391814 OVOS1Q6IE37 1185 aa16.23■□□□□ 0.19
SHANK1-204ENST00000391814 KCNK18Q7Z418 384 aa16.23■□□□□ 0.19
SHANK1-204ENST00000391814 HELQQ8TDG4 1101 aa16.23■□□□□ 0.19
SHANK1-204ENST00000391814 PIK3R3Q92569 461 aa16.23■□□□□ 0.19
SHANK1-204ENST00000391814 CHIAQ9BZP6 476 aa16.23■□□□□ 0.19
SHANK1-204ENST00000391814 TMEM150BA6NC51 233 aa16.23■□□□□ 0.19
SHANK1-204ENST00000391814 UGT1A9O60656 530 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms