RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 FAM221BA6H8Z2 402 aa11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 POM121BA6NF01 834 aa11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 C3orf70A6NLC5 250 aaPredicted RBP11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 THEGLP0DJG4 465 aa11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 KCNA4P22459 653 aa11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 KDELR1P24390 212 aa11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 EPHA8P29322 1005 aaPredicted RBP11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 HSPA9P38646 679 aaKnown RBP11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 GRK6P43250 576 aa11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 RENBPP51606 427 aa11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 CLDN2P57739 230 aa11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 KRT81Q14533 505 aa11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 MESDQ14696 234 aa11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 AGERQ15109 404 aa11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 UGP2Q16851 508 aa11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 LRRC38Q5VT99 294 aa11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 NCBP2-AS2Q69YL0 99 aa11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 BRAT1Q6PJG6 821 aa11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 KYAT3Q6YP21 454 aaKnown RBP11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 RAB44Q7Z6P3 723 aaPredicted RBP11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 SLCO6A1Q86UG4 719 aa11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 CCDC170Q8IYT3 715 aa11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 SLC22A18ASQ8N1D0 253 aa11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 DENND6BQ8NEG7 585 aa11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 OR13H1Q8NG92 308 aa11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 RAPGEF5Q92565 580 aa11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 MAML1Q92585 1016 aa11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 IFT43Q96FT9 208 aa11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 TSGA13Q96PP4 275 aa11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 PANX2Q96RD6 677 aa11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 CDC6Q99741 560 aa11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 MGME1Q9BQP7 344 aa11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 ATP13A3Q9H7F0 1226 aa11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 KLHL11Q9NVR0 708 aa11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 APC2O95996 2303 aa11.5□□□□□ -0.57
IGHV4-28-201ENST00000390612 DSPP15924 2871 aaKnown RBP11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 CFAP69A5D8W1 941 aa11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 RIOK3O14730 519 aaKnown RBP11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 HTRA2O43464 458 aaPredicted RBP11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 MFSD11O43934 449 aa11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 TRIM16O95361 564 aa11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 TOP3BO95985 862 aaKnown RBP11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 MMP12P39900 470 aa11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 GARSP41250 739 aaKnown RBP11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 SSR1P43307 286 aaKnown RBP11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 MAGEA1P43355 309 aa11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 ARRB1P49407 418 aaPredicted RBP11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 PFN3P60673 137 aa11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 AP1S1P61966 158 aa11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 ELP6Q0PNE2 266 aa11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 SLC10A2Q12908 348 aaPredicted RBP11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 BNIP3Q12983 259 aa11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 TAZQ16635 292 aa11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 RALGPS1Q5JS13 557 aa11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 LRRC73Q5JTD7 316 aa11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 Q6ZSR6 202 aa11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 GATAD2AQ86YP4 633 aa11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 DCP2Q8IU60 420 aaKnown RBP11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 MAP7D3Q8IWC1 876 aa11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 KCTD6Q8NC69 237 aa11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 RHBDD1Q8TEB9 315 aa11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 SETD7Q8WTS6 366 aaKnown RBP11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 ADAMTS14Q8WXS8 1223 aa11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 RNF157Q96PX1 679 aa11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 NUDCD1Q96RS6 583 aa11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 MYOCQ99972 504 aa11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 CINPQ9BW66 212 aaPredicted RBP11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 PCDH12Q9NPG4 1184 aa11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 ANGPTL2Q9UKU9 493 aa11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 PCDHB9Q9Y5E1 797 aa11.49□□□□□ -0.57
IGHV4-28-201ENST00000390612 A0A0A6YYK5 440 aaPredicted RBP11.48□□□□□ -0.57
IGHV4-28-201ENST00000390612 SPTY2D1-AS1A0A0U1RR47 76 aa11.48□□□□□ -0.57
IGHV4-28-201ENST00000390612 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.48□□□□□ -0.57
IGHV4-28-201ENST00000390612 A6NNZ2 444 aa11.48□□□□□ -0.57
IGHV4-28-201ENST00000390612 TNFSF14O43557 240 aa11.48□□□□□ -0.57
IGHV4-28-201ENST00000390612 MMP20O60882 483 aa11.48□□□□□ -0.57
IGHV4-28-201ENST00000390612 SOCS5O75159 536 aa11.48□□□□□ -0.57
IGHV4-28-201ENST00000390612 TM7SF2O76062 418 aa11.48□□□□□ -0.57
IGHV4-28-201ENST00000390612 ATXN1LP0C7T5 689 aaKnown RBP11.48□□□□□ -0.57
IGHV4-28-201ENST00000390612 FTH1P19P0C7X4 201 aa11.48□□□□□ -0.57
IGHV4-28-201ENST00000390612 GIMD1P0DJR0 217 aa11.48□□□□□ -0.57
IGHV4-28-201ENST00000390612 CCNCP24863 283 aa11.48□□□□□ -0.57
IGHV4-28-201ENST00000390612 SERPINA4P29622 427 aa11.48□□□□□ -0.57
IGHV4-28-201ENST00000390612 SLC1A1P43005 524 aa11.48□□□□□ -0.57
IGHV4-28-201ENST00000390612 SCNN1BP51168 640 aa11.48□□□□□ -0.57
IGHV4-28-201ENST00000390612 IL9RQ01113 521 aa11.48□□□□□ -0.57
IGHV4-28-201ENST00000390612 GBE1Q04446 702 aa11.48□□□□□ -0.57
IGHV4-28-201ENST00000390612 BCL2L1Q07817 233 aa11.48□□□□□ -0.57
IGHV4-28-201ENST00000390612 RALGDSQ12967 914 aa11.48□□□□□ -0.57
IGHV4-28-201ENST00000390612 SGCGQ13326 291 aa11.48□□□□□ -0.57
IGHV4-28-201ENST00000390612 IHHQ14623 411 aa11.48□□□□□ -0.57
IGHV4-28-201ENST00000390612 TPRG1LQ5T0D9 272 aa11.48□□□□□ -0.57
IGHV4-28-201ENST00000390612 ALG1LQ6GMV1 187 aa11.48□□□□□ -0.57
IGHV4-28-201ENST00000390612 CBARPQ8N350 705 aaPredicted RBP11.48□□□□□ -0.57
IGHV4-28-201ENST00000390612 SLC25A45Q8N413 288 aa11.48□□□□□ -0.57
IGHV4-28-201ENST00000390612 ATPAF2Q8N5M1 289 aa11.48□□□□□ -0.57
IGHV4-28-201ENST00000390612 TP53I13Q8NBR0 393 aaPredicted RBP11.48□□□□□ -0.57
IGHV4-28-201ENST00000390612 TMEM121BQ9BXQ6 578 aaPredicted RBP11.48□□□□□ -0.57
IGHV4-28-201ENST00000390612 CALN1Q9BXU9 219 aa11.48□□□□□ -0.57
IGHV4-28-201ENST00000390612 NOD2Q9HC29 1040 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms