RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 NUDT2P50583 147 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 ELOAQ14241 798 aaKnown RBP4.91□□□□□ -1.62
PTPRD-203ENST00000381196 CNSTQ6PJW8 725 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 RBM44Q6ZP01 1051 aaKnown RBP4.91□□□□□ -1.62
PTPRD-203ENST00000381196 SPATA19Q7Z5L4 167 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.91□□□□□ -1.62
PTPRD-203ENST00000381196 GALNT11Q8NCW6 608 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 UBE2E3Q969T4 207 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 CPXM1Q96SM3 734 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 CYP2S1Q96SQ9 504 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 UCK2Q9BZX2 261 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 SMYD3Q9H7B4 428 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 ALG6Q9Y672 507 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 C3orf70A6NLC5 250 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-203ENST00000381196 EXTL3O43909 919 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 HBP1O60381 514 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 RB1P06400 928 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 GSTT2BP0CG30 244 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 GKP32189 559 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 SLCO1A2P46721 670 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 GCLMP48507 274 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 KDSRQ06136 332 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 VAC14Q08AM6 782 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 TOR1AIP1Q5JTV8 583 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 FGD2Q7Z6J4 655 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 TMEM17Q86X19 198 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 KRT78Q8N1N4 520 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 TTC9Q92623 222 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 SLC45A3Q96JT2 553 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 MARK4Q96L34 752 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 ACAT2Q9BWD1 397 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 EHD4Q9H223 541 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 RUBCNLQ9H714 662 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 C14orf105Q9NVL8 296 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 ST3GAL5Q9UNP4 418 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 CDK5RAP2Q96SN8 1893 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 DNAJC13O75165 2243 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 MDM4O15151 490 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 ATG7O95352 703 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 ALOX15P16050 662 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-203ENST00000381196 AQP5P55064 265 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 FMR1Q06787 632 aaKnown RBP eCLIP4.91□□□□□ -1.62
PTPRD-203ENST00000381196 FAM76BQ5HYJ3 339 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 LCN1P1Q5VSP4 162 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 ADGRD1Q6QNK2 874 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 ASRGL1Q7L266 308 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 NECAB2Q7Z6G3 386 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 CATSPER3Q86XQ3 398 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 WDR48Q8TAF3 677 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 CHPT1Q8WUD6 406 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 KLHL6Q8WZ60 621 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 ZUFSPQ96AP4 578 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 ZHX1-C8orf76Q96EF9 292 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 CEP295NLQ96MC4 621 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 KCTD14Q9BQ13 255 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-203ENST00000381196 SPOCK3Q9BQ16 436 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 GAREM1Q9H706 876 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 TM9SF3Q9HD45 589 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 ZNF358Q9NW07 568 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 ARHGEF38Q9NXL2 777 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 TRAF6Q9Y4K3 522 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 SBF2Q86WG5 1849 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 DFFAO00273 331 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 ADAMDEC1O15204 470 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 HDAC3O15379 428 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 NPHS1O60500 1241 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 PET100P0DJ07 73 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 GRIA1P42261 906 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 NAMPTP43490 491 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 OXCT1P55809 520 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 C2orf80Q0P641 193 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 NME3Q13232 169 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 ITGA7Q13683 1181 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 PKN1Q16512 942 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 PTPN21Q16825 1174 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 CCDC142Q17RM4 750 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 DGKKQ5KSL6 1271 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 LYPLAL1Q5VWZ2 237 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 ZNF773Q6PK81 442 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 LACC1Q8IV20 430 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 ISCA1Q9BUE6 129 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 NT5DC2Q9H857 520 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 CD93Q9NPY3 652 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 PRMT7Q9NVM4 692 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-203ENST00000381196 MED11Q9P086 117 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 CNTNAP5Q8WYK1 1306 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 CXCL11O14625 94 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 HAT1O14929 419 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 SLC28A2O43868 658 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 GMFGO60234 142 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 CTDNEP1O95476 244 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 NDUFB10O96000 172 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 HMGN1P05114 100 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 SEC24CP53992 1094 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 SEMA3AQ14563 771 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 ESRP1Q6NXG1 681 aaKnown RBP4.91□□□□□ -1.62
PTPRD-203ENST00000381196 CLYBLQ8N0X4 340 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 IGDCC4Q8TDY8 1250 aa4.91□□□□□ -1.62
PTPRD-203ENST00000381196 NMD3Q96D46 503 aaKnown RBP4.91□□□□□ -1.62
PTPRD-203ENST00000381196 SLC41A3Q96GZ6 507 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms