RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 PIGNO95427 931 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 UGT2B4P06133 528 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 IGHV4-34P06331 123 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 SERPINF2P08697 491 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 ITGB7P26010 798 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 CD27P26842 260 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 RPIAP49247 311 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 CCR5P51681 352 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 ATXN3P54252 364 aaPredicted RBP9.35□□□□□ -0.91
HMGN1-202ENST00000380747 PPP2CBP62714 309 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 DYNLT1P63172 113 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 PPP2CAP67775 309 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 GBE1Q04446 702 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 KIF5AQ12840 1032 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 FOXC1Q12948 553 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 ZNF235Q14590 738 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 PAFAH1B3Q15102 231 aaKnown RBP9.35□□□□□ -0.91
HMGN1-202ENST00000380747 ZNF805Q5CZA5 627 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 PIP5KL1Q5T9C9 394 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 PEAR1Q5VY43 1037 aaPredicted RBP9.35□□□□□ -0.91
HMGN1-202ENST00000380747 PARS2Q7L3T8 475 aaKnown RBP9.35□□□□□ -0.91
HMGN1-202ENST00000380747 BBS5Q8N3I7 341 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 PQLC3Q8N755 202 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 PAF1Q8N7H5 531 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 TSEN2Q8NCE0 465 aaKnown RBP9.35□□□□□ -0.91
HMGN1-202ENST00000380747 FAF2Q96CS3 445 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 LRIG1Q96JA1 1093 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 KLHL32Q96NJ5 620 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 ZNF599Q96NL3 588 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 RNF157Q96PX1 679 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 SCNM1Q9BWG6 230 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 GTPBP2Q9BX10 602 aaKnown RBP9.35□□□□□ -0.91
HMGN1-202ENST00000380747 C1QTNF2Q9BXJ5 285 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 OSBPL1AQ9BXW6 950 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 LACRTQ9GZZ8 138 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 TRIM10Q9UDY6 481 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 SEPT3Q9UH03 358 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 NEUROG3Q9Y4Z2 214 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 THADAQ6YHU6 1953 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 PLXND1Q9Y4D7 1925 aa9.35□□□□□ -0.91
HMGN1-202ENST00000380747 NYNRINQ9P2P1 1898 aaKnown RBP9.34□□□□□ -0.91
HMGN1-202ENST00000380747 A0A0U1RQJ8 604 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 A0A1W2PPC4 97 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 A0A1W2PQU0 124 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 MACROD2A1Z1Q3 448 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 C3orf70A6NLC5 250 aaPredicted RBP9.34□□□□□ -0.91
HMGN1-202ENST00000380747 BTNL10A8MVZ5 291 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 NEMP1O14524 444 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 CDX4O14627 284 aaPredicted RBP9.34□□□□□ -0.91
HMGN1-202ENST00000380747 APOL1O14791 398 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 BCAT2O15382 392 aaPredicted RBP9.34□□□□□ -0.91
HMGN1-202ENST00000380747 PJA2O43164 708 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 MAFKO60675 156 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 PCDH8O95206 1070 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 ADRB3P13945 408 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 ENGP17813 658 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 XPAP23025 273 aaPredicted RBP9.34□□□□□ -0.91
HMGN1-202ENST00000380747 MAT2AP31153 395 aaKnown RBP9.34□□□□□ -0.91
HMGN1-202ENST00000380747 MAPK8P45983 427 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 RGRP47804 291 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 RENBPP51606 427 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 TAS2R38P59533 333 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 SLC10A7Q0GE19 358 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 GALNT2Q10471 571 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 LLGL1Q15334 1064 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 IFI16Q16666 785 aaKnown RBP9.34□□□□□ -0.91
HMGN1-202ENST00000380747 CFAP58Q5T655 872 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 MARC1Q5VT66 337 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 KAZNQ674X7 775 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 SLC23A3Q6PIS1 610 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 MFSD7Q6UXD7 560 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 SPOCD1Q6ZMY3 1216 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 LIAT1Q6ZQX7 453 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 SRLQ86TD4 932 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 PRPF39Q86UA1 669 aaKnown RBP9.34□□□□□ -0.91
HMGN1-202ENST00000380747 CCDC50Q8IVM0 306 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 CCNYQ8ND76 341 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 ZCCHC14Q8WYQ9 949 aaKnown RBP9.34□□□□□ -0.91
HMGN1-202ENST00000380747 KLK6Q92876 244 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 FAM131CQ96AQ9 280 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 ZNF830Q96NB3 372 aaPredicted RBP9.34□□□□□ -0.91
HMGN1-202ENST00000380747 HDAC8Q9BY41 377 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 PREBQ9HCU5 417 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 AASDHPPTQ9NRN7 309 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.34□□□□□ -0.91
HMGN1-202ENST00000380747 MSRB2Q9Y3D2 182 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 HEY1Q9Y5J3 304 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 SLCO1B1Q9Y6L6 691 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 ABCA7Q8IZY2 2146 aa9.34□□□□□ -0.91
HMGN1-202ENST00000380747 ASCC3Q8N3C0 2202 aaKnown RBP9.33□□□□□ -0.92
HMGN1-202ENST00000380747 TTC24A2A3L6 582 aaPredicted RBP9.33□□□□□ -0.92
HMGN1-202ENST00000380747 GRID2IPA4D2P6 1211 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 FAM221BA6H8Z2 402 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 PCNX2A6NKB5 2137 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 UPK3BL1B0FP48 263 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 ZNF487B1APH4 448 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 UPK3BL2E5RIL1 263 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 TAF4O00268 1085 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 ARHGAP6O43182 974 aa9.33□□□□□ -0.92
HMGN1-202ENST00000380747 GJB3O75712 270 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms