RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 TUBB3Q13509 450 aa23.28■■□□□ 1.32
VPS16-201ENST00000380443 TRIM60Q495X7 471 aa23.28■■□□□ 1.32
VPS16-201ENST00000380443 ZNF783Q6ZMS7 281 aa23.28■■□□□ 1.32
VPS16-201ENST00000380443 CENPLQ8N0S6 344 aaPredicted RBP23.28■■□□□ 1.32
VPS16-201ENST00000380443 OR13J1Q8NGT2 312 aa23.28■■□□□ 1.32
VPS16-201ENST00000380443 TMEM169Q96HH4 297 aa23.28■■□□□ 1.32
VPS16-201ENST00000380443 GATA5Q9BWX5 397 aaPredicted RBP23.28■■□□□ 1.32
VPS16-201ENST00000380443 MRPL46Q9H2W6 279 aaKnown RBP23.28■■□□□ 1.32
VPS16-201ENST00000380443 TBX21Q9UL17 535 aa23.28■■□□□ 1.32
VPS16-201ENST00000380443 EPB41L3Q9Y2J2 1087 aaPredicted RBP23.28■■□□□ 1.32
VPS16-201ENST00000380443 RAP2CQ9Y3L5 183 aa23.28■■□□□ 1.32
VPS16-201ENST00000380443 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.27■■□□□ 1.32
VPS16-201ENST00000380443 E2F8A0AVK6 867 aa23.27■■□□□ 1.32
VPS16-201ENST00000380443 SPECC1L-ADORA2AF8WAN1 911 aa23.27■■□□□ 1.32
VPS16-201ENST00000380443 H3BNC9 293 aa23.27■■□□□ 1.32
VPS16-201ENST00000380443 ZNF195O14628 629 aa23.27■■□□□ 1.32
VPS16-201ENST00000380443 SEC24AO95486 1093 aa23.27■■□□□ 1.32
VPS16-201ENST00000380443 EZRP15311 586 aaKnown RBP23.27■■□□□ 1.32
VPS16-201ENST00000380443 SAT1P21673 171 aa23.27■■□□□ 1.32
VPS16-201ENST00000380443 HOXD9P28356 352 aaPredicted RBP23.27■■□□□ 1.32
VPS16-201ENST00000380443 IDH3AP50213 366 aa23.27■■□□□ 1.32
VPS16-201ENST00000380443 OXCT1P55809 520 aa23.27■■□□□ 1.32
VPS16-201ENST00000380443 ZNF177Q13360 481 aaPredicted RBP23.27■■□□□ 1.32
VPS16-201ENST00000380443 RAB33AQ14088 237 aa23.27■■□□□ 1.32
VPS16-201ENST00000380443 ADGRF1Q5T601 910 aa23.27■■□□□ 1.32
VPS16-201ENST00000380443 HERC6Q8IVU3 1022 aa23.27■■□□□ 1.32
VPS16-201ENST00000380443 SLC39A11Q8N1S5 342 aa23.27■■□□□ 1.32
VPS16-201ENST00000380443 FSTL5Q8N475 847 aaPredicted RBP23.27■■□□□ 1.32
VPS16-201ENST00000380443 GPR150Q8NGU9 434 aa23.27■■□□□ 1.32
VPS16-201ENST00000380443 TTC8Q8TAM2 541 aa23.27■■□□□ 1.32
VPS16-201ENST00000380443 BRSK1Q8TDC3 778 aa23.27■■□□□ 1.32
VPS16-201ENST00000380443 KCTD4Q8WVF5 259 aa23.27■■□□□ 1.32
VPS16-201ENST00000380443 TOP1MTQ969P6 601 aa23.27■■□□□ 1.32
VPS16-201ENST00000380443 CCDC126Q96EE4 140 aa23.27■■□□□ 1.32
VPS16-201ENST00000380443 MYEOVQ96EZ4 313 aa23.27■■□□□ 1.32
VPS16-201ENST00000380443 CADM1Q9BY67 442 aaKnown RBP23.27■■□□□ 1.32
VPS16-201ENST00000380443 C1orf21Q9H246 121 aa23.27■■□□□ 1.32
VPS16-201ENST00000380443 CD248Q9HCU0 757 aa23.27■■□□□ 1.32
VPS16-201ENST00000380443 PNPOQ9NVS9 261 aa23.27■■□□□ 1.32
VPS16-201ENST00000380443 UBA2Q9UBT2 640 aaPredicted RBP23.27■■□□□ 1.32
VPS16-201ENST00000380443 A0A1B0GVM2 712 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 TCAF2A6NFQ2 919 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.26■■□□□ 1.31
VPS16-201ENST00000380443 STC2O76061 302 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 GJB5O95377 273 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 NDST3O95803 873 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 RPL17P18621 184 aaKnown RBP23.26■■□□□ 1.31
VPS16-201ENST00000380443 TAS2R39P59534 338 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 PRAMEP78395 509 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 FAM83EQ2M2I3 478 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 DNAL1Q4LDG9 190 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 CFAP157Q5JU67 520 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 CILP2Q8IUL8 1156 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 C7orf61Q8IZ16 206 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 TEX9Q8N6V9 391 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 MCUR1Q96AQ8 359 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 ZNF689Q96CS4 500 aaPredicted RBP23.26■■□□□ 1.31
VPS16-201ENST00000380443 PRR11Q96HE9 360 aaPredicted RBP23.26■■□□□ 1.31
VPS16-201ENST00000380443 GPR78Q96P69 363 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 EBF4Q9BQW3 602 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 CYP4F11Q9HBI6 524 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 TAS2R1Q9NYW7 299 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 VTI1BQ9UEU0 232 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 STK39Q9UEW8 545 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 STOML2Q9UJZ1 356 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 YIPF1Q9Y548 306 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 MYLKQ15746 1914 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 LDB2O43679 373 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 EFCAB14O75071 495 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 DNAJB13P59910 316 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 NSUN2Q08J23 767 aaKnown RBP eCLIP23.26■■□□□ 1.31
VPS16-201ENST00000380443 PRKAA1Q13131 559 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 RCN2Q14257 317 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 SPOUT1Q5T280 376 aaKnown RBP23.26■■□□□ 1.31
VPS16-201ENST00000380443 WLSQ5T9L3 541 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 AGAP9Q5VTM2 703 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 IL31Q6EBC2 164 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 EPGNQ6UW88 154 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 DENND1CQ8IV53 801 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 CEP97Q8IW35 865 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 CFAP52Q8N1V2 620 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 GPATCH11Q8N954 259 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 AGAP11Q8TF27 550 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 MIPEPQ99797 713 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 OMDQ99983 421 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 CINPQ9BW66 212 aaPredicted RBP23.26■■□□□ 1.31
VPS16-201ENST00000380443 KLF16Q9BXK1 252 aaPredicted RBP23.26■■□□□ 1.31
VPS16-201ENST00000380443 TRPC7Q9HCX4 862 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 ARMCX1Q9P291 453 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 TBC1D30Q9Y2I9 924 aa23.26■■□□□ 1.31
VPS16-201ENST00000380443 NPHS1O60500 1241 aa23.25■■□□□ 1.31
VPS16-201ENST00000380443 MAGEC1O60732 1142 aa23.25■■□□□ 1.31
VPS16-201ENST00000380443 SBK3P0C264 359 aa23.25■■□□□ 1.31
VPS16-201ENST00000380443 LAG3P18627 525 aa23.25■■□□□ 1.31
VPS16-201ENST00000380443 CORO1AP31146 461 aaKnown RBP23.25■■□□□ 1.31
VPS16-201ENST00000380443 ALDH18A1P54886 795 aaKnown RBP23.25■■□□□ 1.31
VPS16-201ENST00000380443 IHHQ14623 411 aa23.25■■□□□ 1.31
VPS16-201ENST00000380443 FSCBQ5H9T9 825 aa23.25■■□□□ 1.31
VPS16-201ENST00000380443 KLC3Q6P597 504 aa23.25■■□□□ 1.31
VPS16-201ENST00000380443 RFWD3Q6PCD5 774 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms