RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 SYCP2LQ5T4T6 812 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 TEDDM1Q5T9Z0 273 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 RNF111Q6ZNA4 994 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 CLEC14AQ86T13 490 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 FAM149B1Q96BN6 582 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 NUDCD1Q96RS6 583 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 ZC3H7BQ9UGR2 993 aaKnown RBP7.83□□□□□ -1.16
CDKL5-202ENST00000379996 DOCK4Q8N1I0 1966 aa7.83□□□□□ -1.16
CDKL5-202ENST00000379996 F8W8V4 182 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 GRAP2O75791 330 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 PSMG1O95456 288 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 LMNAP02545 664 aaKnown RBP7.82□□□□□ -1.16
CDKL5-202ENST00000379996 RHOP08100 348 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 PAX7P23759 505 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 CLNS1AP54105 237 aaKnown RBP7.82□□□□□ -1.16
CDKL5-202ENST00000379996 WASHC5Q12768 1159 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 FOXC1Q12948 553 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 TJAP1Q5JTD0 557 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 FAXCQ5TGI0 409 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 OR52E8Q6IFG1 317 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 SYCE2Q6PIF2 218 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 KYAT3Q6YP21 454 aaKnown RBP7.82□□□□□ -1.16
CDKL5-202ENST00000379996 HTR3DQ70Z44 454 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 CPXM2Q8N436 756 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 TAB3Q8N5C8 712 aaPredicted RBP7.82□□□□□ -1.16
CDKL5-202ENST00000379996 SUSD6Q92537 303 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 MRPS31Q92665 395 aaKnown RBP7.82□□□□□ -1.16
CDKL5-202ENST00000379996 FATE1Q969F0 183 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 E2F7Q96AV8 911 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 BTN2A3PQ96KV6 586 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 PANX3Q96QZ0 392 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 GDE1Q9NZC3 331 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 SHROOM3Q8TF72 1996 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 TRANK1O15050 2925 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 TRAV19A0A0A6YYK7 116 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 CCDC195A0A1B0GUA6 201 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 DRGXA6NNA5 263 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 SOX1O00570 391 aaPredicted RBP7.82□□□□□ -1.16
CDKL5-202ENST00000379996 KRT36O76013 467 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 AMPD1P23109 780 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 BMPR2Q13873 1038 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 LBRQ14739 615 aaKnown RBP7.82□□□□□ -1.16
CDKL5-202ENST00000379996 GRIN2CQ14957 1233 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 FOXB2Q5VYV0 432 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 KCTD11Q693B1 232 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 LRRC8BQ6P9F7 803 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 PDZD4Q76G19 769 aaPredicted RBP7.82□□□□□ -1.16
CDKL5-202ENST00000379996 CDKL3Q8IVW4 592 aaPredicted RBP7.82□□□□□ -1.16
CDKL5-202ENST00000379996 UNC5BQ8IZJ1 945 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 TMEM151AQ8N4L1 468 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 TTC17Q96AE7 1141 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 CFAP36Q96G28 342 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 NECTIN4Q96NY8 510 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 MARCH2Q9P0N8 246 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 SLC17A6Q9P2U8 582 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 FOXD3Q9UJU5 478 aaPredicted RBP7.82□□□□□ -1.16
CDKL5-202ENST00000379996 A0A0G2JND7 137 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 HACD1B0YJ81 288 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 CCL16O15467 120 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 INHBAP08476 426 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 CNTFP26441 200 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 TBX4P57082 545 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 PDE1CQ14123 709 aaPredicted RBP7.82□□□□□ -1.16
CDKL5-202ENST00000379996 PAFAH1B3Q15102 231 aaKnown RBP7.82□□□□□ -1.16
CDKL5-202ENST00000379996 PGM2L1Q6PCE3 622 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 MAP7D3Q8IWC1 876 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 ATP6V0D2Q8N8Y2 350 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 RBM15BQ8NDT2 890 aaKnown RBP7.82□□□□□ -1.16
CDKL5-202ENST00000379996 ACMSDQ8TDX5 336 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 GATA6Q92908 595 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 EBF4Q9BQW3 602 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 SIKE1Q9BRV8 207 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 KLC2Q9H0B6 622 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 WDCPQ9H6R7 721 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 ANLNQ9NQW6 1124 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 DDIT4Q9NX09 232 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 PSAT1Q9Y617 370 aa7.82□□□□□ -1.16
CDKL5-202ENST00000379996 A0A088AWK7 358 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 DCLK1O15075 740 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 FGF10O15520 208 aaPredicted RBP7.81□□□□□ -1.16
CDKL5-202ENST00000379996 ITM2AO43736 263 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 MFSD11O43934 449 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 TM7SF2O76062 418 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 PROCP04070 461 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 SERPINA6P08185 405 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 ZFXP17010 805 aaPredicted RBP7.81□□□□□ -1.16
CDKL5-202ENST00000379996 GABRR2P28476 465 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 CCR2P41597 374 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 MTHFRP42898 656 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 PITX1P78337 314 aaPredicted RBP7.81□□□□□ -1.16
CDKL5-202ENST00000379996 ZNF33AQ06730 810 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 AP1B1Q10567 949 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 NAB1Q13506 487 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 ADGRE1Q14246 886 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.81□□□□□ -1.16
CDKL5-202ENST00000379996 AFMIDQ63HM1 303 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 NET1Q7Z628 596 aaPredicted RBP7.81□□□□□ -1.16
CDKL5-202ENST00000379996 PHC3Q8NDX5 983 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 STON2Q8WXE9 905 aa7.81□□□□□ -1.16
CDKL5-202ENST00000379996 OTUB2Q96DC9 234 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms