RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 ENY2Q9NPA8 101 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 PDHXO00330 501 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 CCSAPQ6IQ19 270 aaPredicted RBP11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 C16orf59Q7L2K0 433 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 DET1Q7L5Y6 550 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 CPNE2Q96FN4 548 aaPredicted RBP11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 TAPBPLQ9BX59 468 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 HBS1LQ9Y450 684 aaKnown RBP11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 SHANK1Q9Y566 2161 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 TMEM253P0C7T8 217 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 PPP3R1P63098 170 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 SULT1C3Q6IMI6 304 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 LRRC69Q6ZNQ3 347 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 SGMS1Q86VZ5 419 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 TMEM86AQ8N2M4 240 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 SETD6Q8TBK2 473 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 DNAJA4Q8WW22 397 aaPredicted RBP11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 ZHX1-C8orf76Q96EF9 292 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 DCLRE1BQ9H816 532 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 CLEC4AQ9UMR7 237 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 SQLEQ14534 574 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 OASLQ15646 514 aaKnown RBP11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 CHSY3Q70JA7 882 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 SLC33A1O00400 549 aaPredicted RBP11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 ANO7Q6IWH7 933 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 KDM7AQ6ZMT4 941 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 OSMRQ99650 979 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 APBA2Q99767 749 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 RGS10O43665 173 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 USP17L7P0C7H9 530 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 IDH2P48735 452 aaKnown RBP11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 FXR2P51116 673 aaKnown RBP eCLIP11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 PPP2R2BQ00005 443 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 PARGQ86W56 976 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 ZNF615Q8N8J6 731 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 TPCN2Q8NHX9 752 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 ZNF558Q96NG5 402 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 BRD9Q9H8M2 597 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 PXMP2Q9NR77 195 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 WDR27A2RRH5 827 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 SNAP47Q5SQN1 464 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 PRAMEF18Q5VWM3 479 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 TRPV1Q8NER1 839 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 MICAL2O94851 1124 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 MYL6P60660 151 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 POM121L1PQ3SYA9 428 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 RNF43Q68DV7 783 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 GALNTL5Q7Z4T8 443 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 ZNF227Q86WZ6 799 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 MTFMTQ96DP5 389 aaKnown RBP11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 RXFP1Q9HBX9 757 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 TLL1O43897 1013 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 C9orf131Q5VYM1 1079 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 QSOX2Q6ZRP7 698 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 P4HA3Q7Z4N8 544 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 KLF6Q99612 283 aaPredicted RBP11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 MORF4L1Q9UBU8 362 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 WNK1Q9H4A3 2382 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 CLOCKO15516 846 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 PLIN3O60664 434 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 NQO1P15559 274 aaKnown RBP11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 LAMTOR4Q0VGL1 99 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 NR1I3Q14994 352 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 CERCAMQ5T4B2 595 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 MMADHCQ9H3L0 296 aaPredicted RBP11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 SEMA3GQ9NS98 782 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 ZCCHC11Q5TAX3 1644 aaKnown RBP11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 H3BRB1 525 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 CLDN4O14493 209 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 TOB2Q14106 344 aaPredicted RBP11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 RNF145Q96MT1 663 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 TUT1Q9H6E5 874 aaKnown RBP11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 CDHR5Q9HBB8 845 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 USP20Q9Y2K6 914 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 RB1P06400 928 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 CLCN3P51790 818 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 MAPK7Q13164 816 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 R3HDM1Q15032 1099 aaKnown RBP11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 BROXQ5VW32 411 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 HEXDCQ8WVB3 486 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 PCDH9Q9HC56 1237 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 TMEM5Q9Y2B1 443 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 PSMD11O00231 422 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 SERPINE1P05121 402 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 LTKP29376 864 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 SPIBQ01892 262 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 ALPK2Q86TB3 2170 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 KLHDC7AQ5VTJ3 777 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 HJURPQ8NCD3 748 aaPredicted RBP11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 CCDC115Q96NT0 180 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 AP1S3Q96PC3 154 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 C3orf18Q9UK00 162 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 PCDHB11Q9Y5F2 797 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 TOP3BO95985 862 aaKnown RBP11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 IRF8Q02556 426 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 GDPD5Q8WTR4 605 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 PLK4O00444 970 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 MCCD1P59942 119 aaPredicted RBP11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 ZNF730Q6ZMV8 503 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms