RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 TAMM41Q96BW9 452 aa6.75□□□□□ -1.33
CDKAL1-202ENST00000378610 LRRC39Q96DD0 335 aa6.75□□□□□ -1.33
CDKAL1-202ENST00000378610 HSH2DQ96JZ2 352 aa6.75□□□□□ -1.33
CDKAL1-202ENST00000378610 CBWD1Q9BRT8 395 aa6.75□□□□□ -1.33
CDKAL1-202ENST00000378610 SORBS1Q9BX66 1292 aaKnown RBP6.75□□□□□ -1.33
CDKAL1-202ENST00000378610 IMPG2Q9BZV3 1241 aa6.75□□□□□ -1.33
CDKAL1-202ENST00000378610 HOXD1Q9GZZ0 328 aa6.75□□□□□ -1.33
CDKAL1-202ENST00000378610 DRC3Q9H069 523 aa6.75□□□□□ -1.33
CDKAL1-202ENST00000378610 CXorf21Q9HAI6 301 aa6.75□□□□□ -1.33
CDKAL1-202ENST00000378610 CYP4F11Q9HBI6 524 aa6.75□□□□□ -1.33
CDKAL1-202ENST00000378610 WASH6PQ9NQA3 447 aa6.75□□□□□ -1.33
CDKAL1-202ENST00000378610 ARMC1Q9NVT9 282 aa6.75□□□□□ -1.33
CDKAL1-202ENST00000378610 NSMCE4AQ9NXX6 385 aa6.75□□□□□ -1.33
CDKAL1-202ENST00000378610 HACD3Q9P035 362 aa6.75□□□□□ -1.33
CDKAL1-202ENST00000378610 CORO2BQ9UQ03 480 aa6.75□□□□□ -1.33
CDKAL1-202ENST00000378610 TCAF1Q9Y4C2 921 aa6.75□□□□□ -1.33
CDKAL1-202ENST00000378610 DAGLAQ9Y4D2 1042 aa6.75□□□□□ -1.33
CDKAL1-202ENST00000378610 TRAF6Q9Y4K3 522 aa6.75□□□□□ -1.33
CDKAL1-202ENST00000378610 RGSL1A5PLK6 1076 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 METTL12A8MUP2 240 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 FAM227AF5H4B4 570 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 CLOCKO15516 846 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 ENDOD1O94919 500 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 IL18RAPO95256 599 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 GRIA3P42263 894 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 ARCN1P48444 511 aaKnown RBP6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 CHRNEQ04844 493 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 NSUN2Q08J23 767 aaKnown RBP eCLIP6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 TUBA3CQ13748 450 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 FLOT2Q14254 428 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 FASTKD1Q53R41 847 aaKnown RBP6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 FSCBQ5H9T9 825 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 KAZNQ674X7 775 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 STEAP4Q687X5 459 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 SCARA3Q6AZY7 606 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 SLC30A6Q6NXT4 461 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 TATDN1Q6P1N9 297 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 USP17L6PQ6QN14 398 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 UBE2R2Q712K3 238 aaPredicted RBP6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 LSMEM2Q8N112 164 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 BHLHE22Q8NFJ8 381 aaPredicted RBP6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 PNPT1Q8TCS8 783 aaKnown RBP6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 CCDC124Q96CT7 223 aaKnown RBP6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 RILPQ96NA2 401 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 TSGA13Q96PP4 275 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 C1orf50Q9BV19 199 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 B3GNT5Q9BYG0 378 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 EHD1Q9H4M9 534 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 RMND5AQ9H871 391 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 CD209Q9NNX6 404 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 RAB20Q9NX57 234 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 MOCS1Q9NZB8 636 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 MARCOQ9UEW3 520 aaPredicted RBP6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 PCDHB12Q9Y5F1 795 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 A0A1W2PPW3 197 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 CENPBD1B2RD01 187 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 ACOX3O15254 700 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 MSI1O43347 362 aaKnown RBP6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 PLIN3O60664 434 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 LYPLA1O75608 230 aaPredicted RBP6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 CLPXO76031 633 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 TOP3BO95985 862 aaKnown RBP6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 CSH1P0DML2 217 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 CSH2P0DML3 217 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 KITP10721 976 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 MMP8P22894 467 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 GRNP28799 593 aaKnown RBP6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 CDH5P33151 784 aaPredicted RBP6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 BMPR1AP36894 532 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 SERPINB9P50453 376 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 OGDHQ02218 1023 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 PTPN11Q06124 597 aaPredicted RBP6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 NIPAL4Q0D2K0 466 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 MBTPS1Q14703 1052 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 NR1D2Q14995 579 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 ACAP2Q15057 778 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 SF3B4Q15427 424 aaKnown RBP eCLIP6.74□□□□□ -1.336e-7■□□□□ 11.3
CDKAL1-202ENST00000378610 GRIK5Q16478 980 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 TXNRD3NBQ6F5E7 133 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 TTC23LQ6PF05 361 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 ISLR2Q6UXK2 745 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 ZNF534Q76KX8 674 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 CAND1Q86VP6 1230 aaKnown RBP6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 LRRC49Q8IUZ0 686 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 ABRAQ8N0Z2 381 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 ELMOD1Q8N336 334 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 KYQ8NBH2 561 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 SIMC1Q8NDZ2 872 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 CPA5Q8WXQ8 436 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 CELF1Q92879 486 aaKnown RBP6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 ATP2A3Q93084 1043 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 RBM18Q96H35 190 aaKnown RBP6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 TXNDC15Q96J42 360 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 NACC1Q96RE7 527 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 SLC9A7Q96T83 725 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 SLC29A1Q99808 456 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 TBC1D29Q9UFV1 150 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 CD300AQ9UGN4 299 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 PGPEP1LA6NFU8 196 aa6.74□□□□□ -1.33
CDKAL1-202ENST00000378610 GOLGA8SH3BPF8 625 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms