RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 PTAR1Q7Z6K3 402 aaPredicted RBP13.95□□□□□ -0.18
PRPF18-202ENST00000378572 VSIG1Q86XK7 387 aa13.95□□□□□ -0.18
PRPF18-202ENST00000378572 CHST14Q8NCH0 376 aa13.95□□□□□ -0.18
PRPF18-202ENST00000378572 OR7D4Q8NG98 312 aa13.95□□□□□ -0.18
PRPF18-202ENST00000378572 NTAN1Q96AB6 310 aa13.95□□□□□ -0.18
PRPF18-202ENST00000378572 ARRDC3Q96B67 414 aa13.95□□□□□ -0.18
PRPF18-202ENST00000378572 CAPZA3Q96KX2 299 aa13.95□□□□□ -0.18
PRPF18-202ENST00000378572 PEBP4Q96S96 227 aa13.95□□□□□ -0.18
PRPF18-202ENST00000378572 ATP13A1Q9HD20 1204 aa13.95□□□□□ -0.18
PRPF18-202ENST00000378572 TMPRSS4Q9NRS4 437 aa13.95□□□□□ -0.18
PRPF18-202ENST00000378572 IL36AQ9UHA7 158 aa13.95□□□□□ -0.18
PRPF18-202ENST00000378572 A0A0D9SEW6 157 aa13.95□□□□□ -0.18
PRPF18-202ENST00000378572 PDE2AO00408 941 aaPredicted RBP13.95□□□□□ -0.18
PRPF18-202ENST00000378572 SMAD6O43541 496 aaKnown RBP13.95□□□□□ -0.18
PRPF18-202ENST00000378572 RARAP10276 462 aa13.95□□□□□ -0.18
PRPF18-202ENST00000378572 PPP2R5EQ16537 467 aa13.95□□□□□ -0.18
PRPF18-202ENST00000378572 ARSIQ5FYB1 569 aa13.95□□□□□ -0.18
PRPF18-202ENST00000378572 TXNRD3NBQ6F5E7 133 aa13.95□□□□□ -0.18
PRPF18-202ENST00000378572 SETD3Q86TU7 594 aaPredicted RBP13.95□□□□□ -0.18
PRPF18-202ENST00000378572 HORMAD1Q86X24 394 aa13.95□□□□□ -0.18
PRPF18-202ENST00000378572 RYBPQ8N488 228 aaPredicted RBP13.95□□□□□ -0.18
PRPF18-202ENST00000378572 OR2A12Q8NGT7 310 aa13.95□□□□□ -0.18
PRPF18-202ENST00000378572 FAM71BQ8TC56 605 aa13.95□□□□□ -0.18
PRPF18-202ENST00000378572 FAM131CQ96AQ9 280 aa13.95□□□□□ -0.18
PRPF18-202ENST00000378572 CARD6Q9BX69 1037 aa13.95□□□□□ -0.18
PRPF18-202ENST00000378572 ANLNQ9NQW6 1124 aa13.95□□□□□ -0.18
PRPF18-202ENST00000378572 EFR3BQ9Y2G0 817 aa13.95□□□□□ -0.18
PRPF18-202ENST00000378572 CTAGE15A4D2H0 777 aa13.94□□□□□ -0.18
PRPF18-202ENST00000378572 ZNF487B1APH4 448 aa13.94□□□□□ -0.18
PRPF18-202ENST00000378572 KRT1P04264 644 aa13.94□□□□□ -0.18
PRPF18-202ENST00000378572 CTAGE8P0CG41 777 aa13.94□□□□□ -0.18
PRPF18-202ENST00000378572 HNRNPA2B1P22626 353 aaKnown RBP13.94□□□□□ -0.18
PRPF18-202ENST00000378572 GLDCP23378 1020 aa13.94□□□□□ -0.18
PRPF18-202ENST00000378572 GJC1P36383 396 aa13.94□□□□□ -0.18
PRPF18-202ENST00000378572 CLCN6P51797 869 aa13.94□□□□□ -0.18
PRPF18-202ENST00000378572 TAS2R38P59533 333 aa13.94□□□□□ -0.18
PRPF18-202ENST00000378572 TUBB4BP68371 445 aa13.94□□□□□ -0.18
PRPF18-202ENST00000378572 ZNF211Q13398 564 aaPredicted RBP13.94□□□□□ -0.18
PRPF18-202ENST00000378572 TAZQ16635 292 aa13.94□□□□□ -0.18
PRPF18-202ENST00000378572 ATP13A4Q4VNC1 1196 aa13.94□□□□□ -0.18
PRPF18-202ENST00000378572 RAB6CQ53S08 254 aa13.94□□□□□ -0.18
PRPF18-202ENST00000378572 ERMARDQ5T6L9 678 aa13.94□□□□□ -0.18
PRPF18-202ENST00000378572 RETSATQ6NUM9 610 aa13.94□□□□□ -0.18
PRPF18-202ENST00000378572 ERN2Q76MJ5 926 aaKnown RBP13.94□□□□□ -0.18
PRPF18-202ENST00000378572 CTAGE6Q86UF2 777 aa13.94□□□□□ -0.18
PRPF18-202ENST00000378572 FAM131BQ86XD5 332 aa13.94□□□□□ -0.18
PRPF18-202ENST00000378572 CTAGE4Q8IX94 777 aa13.94□□□□□ -0.18
PRPF18-202ENST00000378572 CRELD1Q96HD1 420 aa13.94□□□□□ -0.18
PRPF18-202ENST00000378572 MS4A14Q96JA4 679 aa13.94□□□□□ -0.18
PRPF18-202ENST00000378572 RAB6CQ9H0N0 254 aa13.94□□□□□ -0.18
PRPF18-202ENST00000378572 ZWILCHQ9H900 591 aa13.94□□□□□ -0.18
PRPF18-202ENST00000378572 PCSK1NQ9UHG2 260 aa13.94□□□□□ -0.18
PRPF18-202ENST00000378572 LAMA5O15230 3695 aa13.94□□□□□ -0.18
PRPF18-202ENST00000378572 RRP8O43159 456 aaKnown RBP13.93□□□□□ -0.18
PRPF18-202ENST00000378572 SIGLEC6O43699 453 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 ALPPL2P10696 532 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 ARSEP51690 589 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 CLDN2P57739 230 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 ILKQ13418 452 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 PDK2Q15119 407 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 DPYSL2Q16555 572 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 C5orf22Q49AR2 442 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 SOWAHCQ53LP3 525 aaPredicted RBP13.93□□□□□ -0.18
PRPF18-202ENST00000378572 ODF2Q5BJF6 829 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 SEL1L3Q68CR1 1132 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 SCYL2Q6P3W7 929 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 FBXL19Q6PCT2 694 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 SLC13A5Q86YT5 568 aaPredicted RBP13.93□□□□□ -0.18
PRPF18-202ENST00000378572 TMIEQ8NEW7 156 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 OR13H1Q8NG92 308 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 MAIP1Q8WWC4 291 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 SNRNP25Q9BV90 132 aaKnown RBP13.93□□□□□ -0.18
PRPF18-202ENST00000378572 ZYG11BQ9C0D3 744 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 ZDHHC6Q9H6R6 413 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 CLCA2Q9UQC9 943 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 URB1O60287 2271 aaKnown RBP13.93□□□□□ -0.18
PRPF18-202ENST00000378572 C10orf142B7Z368 130 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 I6L893 689 aaPredicted RBP13.93□□□□□ -0.18
PRPF18-202ENST00000378572 LEFTY1O75610 366 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 FGGP02679 453 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 KDELR1P24390 212 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 NEK3P51956 506 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 SMTNL2Q2TAL5 461 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 ZNF284Q2VY69 593 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 ZFYVE27Q5T4F4 411 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 ACBD5Q5T8D3 534 aaPredicted RBP13.93□□□□□ -0.18
PRPF18-202ENST00000378572 RWDD4Q6NW29 188 aaKnown RBP13.93□□□□□ -0.18
PRPF18-202ENST00000378572 NEK5Q6P3R8 708 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 KDM7AQ6ZMT4 941 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 SPOCD1Q6ZMY3 1216 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 DPY19L3Q6ZPD9 716 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 ZNF354CQ86Y25 554 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 MAP7D3Q8IWC1 876 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 SPATA4Q8NEY3 305 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 RAPGEF5Q92565 580 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 TSC1Q92574 1164 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 OSBPL8Q9BZF1 889 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 TM6SF2Q9BZW4 377 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 UCKL1Q9NWZ5 548 aa13.93□□□□□ -0.18
PRPF18-202ENST00000378572 DNAJC28Q9NX36 388 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms