RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 RABGEF1Q9UJ41 708 aa19.8■□□□□ 0.76
PCDH8-202ENST00000377942 RPP40O75818 363 aaKnown RBP19.8■□□□□ 0.76
PCDH8-202ENST00000377942 OTCP00480 354 aa19.8■□□□□ 0.76
PCDH8-202ENST00000377942 CTBP1Q13363 440 aa19.8■□□□□ 0.76
PCDH8-202ENST00000377942 ZNF618Q5T7W0 954 aa19.8■□□□□ 0.76
PCDH8-202ENST00000377942 HLA-DQA1Q5Y7H0 255 aa19.8■□□□□ 0.76
PCDH8-202ENST00000377942 FAM228AQ86W67 206 aa19.8■□□□□ 0.76
PCDH8-202ENST00000377942 C12orf50Q8NA57 414 aaPredicted RBP19.8■□□□□ 0.76
PCDH8-202ENST00000377942 TEPSINQ96N21 525 aa19.8■□□□□ 0.76
PCDH8-202ENST00000377942 NDNQ99608 321 aa19.8■□□□□ 0.76
PCDH8-202ENST00000377942 ZFYVE1Q9HBF4 777 aa19.8■□□□□ 0.76
PCDH8-202ENST00000377942 ULK1O75385 1050 aa19.79■□□□□ 0.76
PCDH8-202ENST00000377942 PSMC3P17980 439 aa19.79■□□□□ 0.76
PCDH8-202ENST00000377942 PBX3P40426 434 aa19.79■□□□□ 0.76
PCDH8-202ENST00000377942 CERS6Q6ZMG9 384 aa19.79■□□□□ 0.76
PCDH8-202ENST00000377942 CDK20Q8IZL9 346 aa19.79■□□□□ 0.76
PCDH8-202ENST00000377942 TRMOQ9BU70 441 aa19.79■□□□□ 0.76
PCDH8-202ENST00000377942 ADPRHL2Q9NX46 363 aa19.79■□□□□ 0.76
PCDH8-202ENST00000377942 TMEM216Q9P0N5 145 aa19.79■□□□□ 0.76
PCDH8-202ENST00000377942 MAGEA13PA6NCF6 341 aa19.79■□□□□ 0.76
PCDH8-202ENST00000377942 CACNB4O00305 520 aaPredicted RBP19.79■□□□□ 0.76
PCDH8-202ENST00000377942 LIPMQ5VYY2 423 aa19.79■□□□□ 0.76
PCDH8-202ENST00000377942 CDCA2Q69YH5 1023 aaPredicted RBP19.79■□□□□ 0.76
PCDH8-202ENST00000377942 BEND7Q8N7W2 519 aaPredicted RBP19.79■□□□□ 0.76
PCDH8-202ENST00000377942 TRPC4APQ8TEL6 797 aa19.79■□□□□ 0.76
PCDH8-202ENST00000377942 NDRG1Q92597 394 aaKnown RBP19.79■□□□□ 0.76
PCDH8-202ENST00000377942 KRT84Q9NSB2 600 aa19.79■□□□□ 0.76
PCDH8-202ENST00000377942 PDP2Q9P2J9 529 aa19.79■□□□□ 0.76
PCDH8-202ENST00000377942 CHKBQ9Y259 395 aa19.79■□□□□ 0.76
PCDH8-202ENST00000377942 A0A0U1RQF3 1178 aa19.79■□□□□ 0.76
PCDH8-202ENST00000377942 SLC38A8A6NNN8 435 aa19.79■□□□□ 0.76
PCDH8-202ENST00000377942 M0R3G1 203 aa19.79■□□□□ 0.76
PCDH8-202ENST00000377942 SLC25A14O95258 325 aaPredicted RBP19.79■□□□□ 0.76
PCDH8-202ENST00000377942 F2P00734 622 aa19.79■□□□□ 0.76
PCDH8-202ENST00000377942 UNGP13051 313 aaPredicted RBP19.79■□□□□ 0.76
PCDH8-202ENST00000377942 GRIA4P48058 902 aa19.79■□□□□ 0.76
PCDH8-202ENST00000377942 TIGD5Q53EQ6 642 aa19.79■□□□□ 0.76
PCDH8-202ENST00000377942 LRRC23Q53EV4 343 aaPredicted RBP19.79■□□□□ 0.76
PCDH8-202ENST00000377942 DET1Q7L5Y6 550 aa19.79■□□□□ 0.76
PCDH8-202ENST00000377942 KLHL4Q9C0H6 718 aa19.79■□□□□ 0.76
PCDH8-202ENST00000377942 R3HDM2Q9Y2K5 976 aaKnown RBP19.79■□□□□ 0.76
PCDH8-202ENST00000377942 MATN3O15232 486 aa19.79■□□□□ 0.76
PCDH8-202ENST00000377942 AP2A1O95782 977 aa19.79■□□□□ 0.76
PCDH8-202ENST00000377942 COL6A2P12110 1019 aa19.79■□□□□ 0.76
PCDH8-202ENST00000377942 TLX1P31314 330 aaPredicted RBP19.79■□□□□ 0.76
PCDH8-202ENST00000377942 TLE2Q04725 743 aa19.79■□□□□ 0.76
PCDH8-202ENST00000377942 CRYBG2Q8N1P7 616 aa19.79■□□□□ 0.76
PCDH8-202ENST00000377942 RTL3Q8N8U3 475 aaKnown RBP19.79■□□□□ 0.76
PCDH8-202ENST00000377942 TMEM175Q9BSA9 504 aa19.79■□□□□ 0.76
PCDH8-202ENST00000377942 FBXW11Q9UKB1 542 aa19.79■□□□□ 0.76
PCDH8-202ENST00000377942 PRMT5O14744 637 aaPredicted RBP19.78■□□□□ 0.76
PCDH8-202ENST00000377942 BANF1O75531 89 aa19.78■□□□□ 0.76
PCDH8-202ENST00000377942 GCATO75600 419 aa19.78■□□□□ 0.76
PCDH8-202ENST00000377942 PSMA3P25788 255 aa19.78■□□□□ 0.76
PCDH8-202ENST00000377942 LMO2P25791 158 aa19.78■□□□□ 0.76
PCDH8-202ENST00000377942 HNRNPH1P31943 449 aaKnown RBP19.78■□□□□ 0.76
PCDH8-202ENST00000377942 PHC3Q8NDX5 983 aa19.78■□□□□ 0.76
PCDH8-202ENST00000377942 MCRS1Q96EZ8 462 aa19.78■□□□□ 0.76
PCDH8-202ENST00000377942 SLC28A1O00337 649 aa19.78■□□□□ 0.76
PCDH8-202ENST00000377942 PABPC1P11940 636 aaKnown RBP19.78■□□□□ 0.76
PCDH8-202ENST00000377942 TRPC1P48995 793 aa19.78■□□□□ 0.76
PCDH8-202ENST00000377942 GNA13Q14344 377 aa19.78■□□□□ 0.76
PCDH8-202ENST00000377942 C7orf61Q8IZ16 206 aa19.78■□□□□ 0.76
PCDH8-202ENST00000377942 C11orf49Q9H6J7 331 aa19.78■□□□□ 0.76
PCDH8-202ENST00000377942 ERVK-5Q9HDB9 667 aa19.78■□□□□ 0.76
PCDH8-202ENST00000377942 ZNHIT2Q9UHR6 403 aa19.78■□□□□ 0.76
PCDH8-202ENST00000377942 KCNE2Q9Y6J6 123 aa19.78■□□□□ 0.76
PCDH8-202ENST00000377942 PRNPP04156 253 aa19.78■□□□□ 0.76
PCDH8-202ENST00000377942 ABCB1P08183 1280 aaPredicted RBP19.78■□□□□ 0.76
PCDH8-202ENST00000377942 SLC35G4P0C7Q5 338 aa19.78■□□□□ 0.76
PCDH8-202ENST00000377942 COX7A2P14406 83 aa19.78■□□□□ 0.76
PCDH8-202ENST00000377942 AMD1P17707 334 aa19.78■□□□□ 0.76
PCDH8-202ENST00000377942 NTSP30990 170 aa19.78■□□□□ 0.76
PCDH8-202ENST00000377942 AP1S1P61966 158 aa19.78■□□□□ 0.76
PCDH8-202ENST00000377942 SOWAHAQ2M3V2 549 aa19.78■□□□□ 0.76
PCDH8-202ENST00000377942 DRICH1Q6PGQ1 229 aaPredicted RBP19.78■□□□□ 0.76
PCDH8-202ENST00000377942 PAGE2Q7Z2X7 111 aa19.78■□□□□ 0.76
PCDH8-202ENST00000377942 ATG16L2Q8NAA4 619 aa19.78■□□□□ 0.76
PCDH8-202ENST00000377942 STYXQ8WUJ0 223 aa19.78■□□□□ 0.76
PCDH8-202ENST00000377942 FIG4Q92562 907 aa19.78■□□□□ 0.76
PCDH8-202ENST00000377942 GAS2L1Q99501 681 aaPredicted RBP19.78■□□□□ 0.76
PCDH8-202ENST00000377942 FAIM2Q9BWQ8 316 aa19.78■□□□□ 0.76
PCDH8-202ENST00000377942 RAI2Q9Y5P3 530 aa19.78■□□□□ 0.76
PCDH8-202ENST00000377942 FAM220BPB1ANY3 271 aa19.78■□□□□ 0.76
PCDH8-202ENST00000377942 HDAC3O15379 428 aa19.78■□□□□ 0.76
PCDH8-202ENST00000377942 HNRNPDQ14103 355 aaKnown RBP19.78■□□□□ 0.76
PCDH8-202ENST00000377942 SQLEQ14534 574 aa19.78■□□□□ 0.76
PCDH8-202ENST00000377942 GPRIN3Q6ZVF9 776 aa19.78■□□□□ 0.76
PCDH8-202ENST00000377942 TRABD2AQ86V40 505 aa19.78■□□□□ 0.76
PCDH8-202ENST00000377942 MICU2Q8IYU8 434 aa19.78■□□□□ 0.76
PCDH8-202ENST00000377942 ZNF786Q8N393 782 aa19.78■□□□□ 0.76
PCDH8-202ENST00000377942 MRPL48Q96GC5 212 aaKnown RBP19.78■□□□□ 0.76
PCDH8-202ENST00000377942 ABHD14A-ACY1A0A1B0GW23 586 aa19.77■□□□□ 0.76
PCDH8-202ENST00000377942 E7ENQ6 273 aa19.77■□□□□ 0.76
PCDH8-202ENST00000377942 SNX3O60493 162 aa19.77■□□□□ 0.76
PCDH8-202ENST00000377942 BST1Q10588 318 aa19.77■□□□□ 0.76
PCDH8-202ENST00000377942 POM121L1PQ3SYA9 428 aa19.77■□□□□ 0.76
PCDH8-202ENST00000377942 SPPL2AQ8TCT8 520 aa19.77■□□□□ 0.76
PCDH8-202ENST00000377942 MCCC1Q96RQ3 725 aaPredicted RBP19.77■□□□□ 0.76
PCDH8-202ENST00000377942 SDCBP2Q9H190 292 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms