RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 MILR1Q7Z6M3 343 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 CYP4Z1Q86W10 505 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 AQP12AQ8IXF9 295 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 METTL6Q8TCB7 284 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 ADI1Q9BV57 179 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 INTS10Q9NVR2 710 aaKnown RBP8.82□□□□□ -1
PCDH9-202ENST00000377865 FBXO5Q9UKT4 447 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 DUSP12Q9UNI6 340 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 COQ6Q9Y2Z9 468 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 G3V2T6 193 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 BTN3A1O00481 513 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 RGS5O15539 181 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 HNRNPLP14866 589 aaKnown RBP eCLIP8.82□□□□□ -1
PCDH9-202ENST00000377865 ALOX12P18054 663 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 PROZP22891 400 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 SCNN1AP37088 669 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 GBE1Q04446 702 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 TWF1Q12792 350 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 PFKFB4Q16877 469 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 AFTPHQ6ULP2 937 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 AKAP14Q86UN6 197 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 TOP6BLQ8N6T0 577 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 RAB2BQ8WUD1 216 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 ACOX2Q99424 681 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 DUSP16Q9BY84 665 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 REXO4Q9GZR2 422 aaKnown RBP8.82□□□□□ -1
PCDH9-202ENST00000377865 SEMA4BQ9NPR2 832 aaPredicted RBP8.82□□□□□ -1
PCDH9-202ENST00000377865 MYH13Q9UKX3 1938 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.82□□□□□ -1
PCDH9-202ENST00000377865 YDJCA8MPS7 323 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 H0YJX3 145 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 ZSCAN9O15535 394 aaPredicted RBP8.82□□□□□ -1
PCDH9-202ENST00000377865 FARP2O94887 1054 aaPredicted RBP8.82□□□□□ -1
PCDH9-202ENST00000377865 HLA-DPA1P20036 260 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 PLIN5Q00G26 463 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 FOXD4Q12950 439 aaPredicted RBP8.82□□□□□ -1
PCDH9-202ENST00000377865 ZNF177Q13360 481 aaPredicted RBP8.82□□□□□ -1
PCDH9-202ENST00000377865 LSAMPQ13449 338 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 VEPH1Q14D04 833 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 ACAP2Q15057 778 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 TSNQ15631 228 aaKnown RBP8.82□□□□□ -1
PCDH9-202ENST00000377865 TEX44Q53QW1 395 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 B3GALNT2Q8NCR0 500 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 EDEM1Q92611 657 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 NDEL1Q9GZM8 345 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 BCAS3Q9H6U6 928 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 COL20A1Q9P218 1284 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 FZD10Q9ULW2 581 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 LRP5O75197 1615 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 SAGE2PA6NJ88 616 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 WNT10BO00744 389 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 GPR182O15218 404 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 SLC22A3O75751 556 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 CST1P01037 141 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 PEX6Q13608 980 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 TP53BP2Q13625 1128 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 ITGA7Q13683 1181 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 CCDC85BQ15834 202 aaPredicted RBP8.82□□□□□ -1
PCDH9-202ENST00000377865 SHROOM1Q2M3G4 852 aaPredicted RBP8.82□□□□□ -1
PCDH9-202ENST00000377865 IL27RAQ6UWB1 636 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 KIAA0408Q6ZU52 694 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 SVOPLQ8N434 492 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 ZBTB8BQ8NAP8 495 aaPredicted RBP8.82□□□□□ -1
PCDH9-202ENST00000377865 PCDH19Q8TAB3 1148 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 PLEKHO2Q8TD55 490 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 TRAPPC12Q8WVT3 735 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 RBM4BQ9BQ04 359 aaKnown RBP8.82□□□□□ -1
PCDH9-202ENST00000377865 MRPL45Q9BRJ2 306 aaKnown RBP8.82□□□□□ -1
PCDH9-202ENST00000377865 RBM4Q9BWF3 364 aaKnown RBP8.82□□□□□ -1
PCDH9-202ENST00000377865 TMCC3Q9ULS5 477 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 MAPRE3Q9UPY8 281 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 CXorf49A8MYA2 514 aaPredicted RBP8.81□□□□□ -1
PCDH9-202ENST00000377865 DENRO43583 198 aaKnown RBP8.81□□□□□ -1
PCDH9-202ENST00000377865 UGT1A9O60656 530 aa8.81□□□□□ -1
PCDH9-202ENST00000377865 PAX3P23760 479 aa8.81□□□□□ -1
PCDH9-202ENST00000377865 IL1R2P27930 398 aa8.81□□□□□ -1
PCDH9-202ENST00000377865 PRIM2P49643 509 aa8.81□□□□□ -1
PCDH9-202ENST00000377865 FSTL1Q12841 308 aa8.81□□□□□ -1
PCDH9-202ENST00000377865 GRM3Q14832 879 aa8.81□□□□□ -1
PCDH9-202ENST00000377865 CERCAMQ5T4B2 595 aa8.81□□□□□ -1
PCDH9-202ENST00000377865 OLFML1Q6UWY5 402 aa8.81□□□□□ -1
PCDH9-202ENST00000377865 SH3BP5LQ7L8J4 393 aa8.81□□□□□ -1
PCDH9-202ENST00000377865 ZNF605Q86T29 641 aa8.81□□□□□ -1
PCDH9-202ENST00000377865 PIGZQ86VD9 579 aa8.81□□□□□ -1
PCDH9-202ENST00000377865 SPPL2CQ8IUH8 684 aa8.81□□□□□ -1
PCDH9-202ENST00000377865 GLIS1Q8NBF1 620 aa8.81□□□□□ -1
PCDH9-202ENST00000377865 DNAJB14Q8TBM8 379 aa8.81□□□□□ -1
PCDH9-202ENST00000377865 FAM84AQ96KN4 292 aa8.81□□□□□ -1
PCDH9-202ENST00000377865 MAGEB10Q96LZ2 347 aaPredicted RBP8.81□□□□□ -1
PCDH9-202ENST00000377865 POLR1EQ9GZS1 481 aaKnown RBP8.81□□□□□ -1
PCDH9-202ENST00000377865 FBXO44Q9H4M3 255 aa8.81□□□□□ -1
PCDH9-202ENST00000377865 ZNF696Q9H7X3 374 aa8.81□□□□□ -1
PCDH9-202ENST00000377865 UGT1A7Q9HAW7 530 aa8.81□□□□□ -1
PCDH9-202ENST00000377865 UGT1A10Q9HAW8 530 aa8.81□□□□□ -1
PCDH9-202ENST00000377865 UGT1A8Q9HAW9 530 aa8.81□□□□□ -1
PCDH9-202ENST00000377865 EFCAB10A6NFE3 127 aa8.81□□□□□ -1
PCDH9-202ENST00000377865 RAMP2O60895 175 aa8.81□□□□□ -1
PCDH9-202ENST00000377865 BCAS2O75934 225 aaPredicted RBP8.81□□□□□ -1
PCDH9-202ENST00000377865 USP17L7P0C7H9 530 aa8.81□□□□□ -1
PCDH9-202ENST00000377865 NELFEP18615 380 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms