RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 PMS2P1A4D2B8 440 aa19.39■□□□□ 0.69
CBWD3-204ENST00000377349 NEMP1O14524 444 aa19.39■□□□□ 0.69
CBWD3-204ENST00000377349 PDX1P52945 283 aa19.39■□□□□ 0.69
CBWD3-204ENST00000377349 KLHL30Q0D2K2 578 aa19.39■□□□□ 0.69
CBWD3-204ENST00000377349 MYLK3Q32MK0 819 aa19.39■□□□□ 0.69
CBWD3-204ENST00000377349 SLC35F3Q8IY50 421 aa19.39■□□□□ 0.69
CBWD3-204ENST00000377349 ATXN7L3BQ96GX2 97 aa19.39■□□□□ 0.69
CBWD3-204ENST00000377349 KLHL32Q96NJ5 620 aa19.39■□□□□ 0.69
CBWD3-204ENST00000377349 NAP1L5Q96NT1 182 aaPredicted RBP19.39■□□□□ 0.69
CBWD3-204ENST00000377349 LRRC61Q9BV99 259 aa19.39■□□□□ 0.69
CBWD3-204ENST00000377349 KLC2Q9H0B6 622 aa19.39■□□□□ 0.69
CBWD3-204ENST00000377349 CPNE5Q9HCH3 593 aa19.39■□□□□ 0.69
CBWD3-204ENST00000377349 IPO11Q9UI26 975 aaKnown RBP19.39■□□□□ 0.69
CBWD3-204ENST00000377349 FZD10Q9ULW2 581 aa19.39■□□□□ 0.69
CBWD3-204ENST00000377349 ENTPD2Q9Y5L3 495 aa19.39■□□□□ 0.69
CBWD3-204ENST00000377349 CPED1A4D0V7 1026 aa19.38■□□□□ 0.69
CBWD3-204ENST00000377349 KDELR3O43731 214 aa19.38■□□□□ 0.69
CBWD3-204ENST00000377349 POP4O95707 220 aaKnown RBP19.38■□□□□ 0.69
CBWD3-204ENST00000377349 SKILP12757 684 aa19.38■□□□□ 0.69
CBWD3-204ENST00000377349 ITIH2P19823 946 aa19.38■□□□□ 0.69
CBWD3-204ENST00000377349 TPI1P60174 286 aa19.38■□□□□ 0.69
CBWD3-204ENST00000377349 SNRPD1P62314 119 aaKnown RBP19.38■□□□□ 0.69
CBWD3-204ENST00000377349 OGDHQ02218 1023 aa19.38■□□□□ 0.69
CBWD3-204ENST00000377349 C3orf38Q5JPI3 329 aa19.38■□□□□ 0.69
CBWD3-204ENST00000377349 CRTC1Q6UUV9 634 aa19.38■□□□□ 0.69
CBWD3-204ENST00000377349 RTL3Q8N8U3 475 aaKnown RBP19.38■□□□□ 0.69
CBWD3-204ENST00000377349 TP53I13Q8NBR0 393 aaPredicted RBP19.38■□□□□ 0.69
CBWD3-204ENST00000377349 ZNF653Q96CK0 615 aa19.38■□□□□ 0.69
CBWD3-204ENST00000377349 VCPIP1Q96JH7 1222 aa19.38■□□□□ 0.69
CBWD3-204ENST00000377349 OSBPL1AQ9BXW6 950 aa19.38■□□□□ 0.69
CBWD3-204ENST00000377349 CLPBQ9H078 707 aa19.38■□□□□ 0.69
CBWD3-204ENST00000377349 MBNL1Q9NR56 388 aaKnown RBP19.38■□□□□ 0.69
CBWD3-204ENST00000377349 PARVAQ9NVD7 372 aa19.38■□□□□ 0.69
CBWD3-204ENST00000377349 EVA1BQ9NVM1 165 aa19.38■□□□□ 0.69
CBWD3-204ENST00000377349 NCKIPSDQ9NZQ3 722 aa19.38■□□□□ 0.69
CBWD3-204ENST00000377349 MYO1AQ9UBC5 1043 aa19.38■□□□□ 0.69
CBWD3-204ENST00000377349 APOBEC3BQ9UH17 382 aaKnown RBP19.38■□□□□ 0.69
CBWD3-204ENST00000377349 PCSK1NQ9UHG2 260 aa19.38■□□□□ 0.69
CBWD3-204ENST00000377349 MYO6Q9UM54 1294 aa19.38■□□□□ 0.69
CBWD3-204ENST00000377349 TCRBV5S1A1TA0A578 114 aa19.37■□□□□ 0.69
CBWD3-204ENST00000377349 ERVH48-1M5A8F1 160 aa19.37■□□□□ 0.69
CBWD3-204ENST00000377349 TMCC1O94876 653 aa19.37■□□□□ 0.69
CBWD3-204ENST00000377349 PLA2G2AP14555 144 aa19.37■□□□□ 0.69
CBWD3-204ENST00000377349 C1orf61Q13536 156 aa19.37■□□□□ 0.69
CBWD3-204ENST00000377349 TDRD12Q587J7 1177 aaKnown RBP19.37■□□□□ 0.69
CBWD3-204ENST00000377349 PRRT3Q5FWE3 981 aa19.37■□□□□ 0.69
CBWD3-204ENST00000377349 PPP1R15BQ5SWA1 713 aa19.37■□□□□ 0.69
CBWD3-204ENST00000377349 E4F1Q66K89 784 aaPredicted RBP19.37■□□□□ 0.69
CBWD3-204ENST00000377349 ZNF571Q7Z3V5 609 aaPredicted RBP19.37■□□□□ 0.69
CBWD3-204ENST00000377349 LUZP1Q86V48 1076 aa19.37■□□□□ 0.69
CBWD3-204ENST00000377349 VPS36Q86VN1 386 aa19.37■□□□□ 0.69
CBWD3-204ENST00000377349 PHACTR4Q8IZ21 702 aa19.37■□□□□ 0.69
CBWD3-204ENST00000377349 HMCESQ96FZ2 354 aa19.37■□□□□ 0.69
CBWD3-204ENST00000377349 TBATAQ96M53 351 aa19.37■□□□□ 0.69
CBWD3-204ENST00000377349 SLC46A1Q96NT5 459 aa19.37■□□□□ 0.69
CBWD3-204ENST00000377349 DHX35Q9H5Z1 703 aaKnown RBP19.37■□□□□ 0.69
CBWD3-204ENST00000377349 CATSPERBQ9H7T0 1116 aa19.37■□□□□ 0.69
CBWD3-204ENST00000377349 AP4E1Q9UPM8 1137 aa19.37■□□□□ 0.69
CBWD3-204ENST00000377349 A0A1B0GTH6 734 aa19.36■□□□□ 0.69
CBWD3-204ENST00000377349 RASA4BC9J798 803 aa19.36■□□□□ 0.69
CBWD3-204ENST00000377349 LMO7DNF2Z398 122 aa19.36■□□□□ 0.69
CBWD3-204ENST00000377349 RIOK3O14730 519 aaKnown RBP19.36■□□□□ 0.69
CBWD3-204ENST00000377349 DAPK3O43293 454 aa19.36■□□□□ 0.69
CBWD3-204ENST00000377349 RASA4O43374 803 aa19.36■□□□□ 0.69
CBWD3-204ENST00000377349 MMP20O60882 483 aa19.36■□□□□ 0.69
CBWD3-204ENST00000377349 CELA2BP08218 269 aaPredicted RBP19.36■□□□□ 0.69
CBWD3-204ENST00000377349 TMPRSS3P57727 454 aa19.36■□□□□ 0.69
CBWD3-204ENST00000377349 RHOAP61586 193 aa19.36■□□□□ 0.69
CBWD3-204ENST00000377349 MAMLD1Q13495 774 aa19.36■□□□□ 0.69
CBWD3-204ENST00000377349 NR0B2Q15466 257 aa19.36■□□□□ 0.69
CBWD3-204ENST00000377349 C6orf132Q5T0Z8 1188 aa19.36■□□□□ 0.69
CBWD3-204ENST00000377349 PPP1R2P3Q6NXS1 205 aa19.36■□□□□ 0.69
CBWD3-204ENST00000377349 GDPD4Q6W3E5 623 aa19.36■□□□□ 0.69
CBWD3-204ENST00000377349 SNRNP27Q8WVK2 155 aaKnown RBP19.36■□□□□ 0.69
CBWD3-204ENST00000377349 BTN2A2Q8WVV5 523 aa19.36■□□□□ 0.69
CBWD3-204ENST00000377349 KCNE4Q8WWG9 221 aa19.36■□□□□ 0.69
CBWD3-204ENST00000377349 ARHGEF26Q96DR7 871 aa19.36■□□□□ 0.69
CBWD3-204ENST00000377349 CELF6Q96J87 481 aaKnown RBP19.36■□□□□ 0.69
CBWD3-204ENST00000377349 EXOC2Q96KP1 924 aa19.36■□□□□ 0.69
CBWD3-204ENST00000377349 IL12RB2Q99665 862 aa19.36■□□□□ 0.69
CBWD3-204ENST00000377349 NCAPGQ9BPX3 1015 aa19.36■□□□□ 0.69
CBWD3-204ENST00000377349 TTYH3Q9C0H2 523 aa19.36■□□□□ 0.69
CBWD3-204ENST00000377349 CBX8Q9HC52 389 aa19.36■□□□□ 0.69
CBWD3-204ENST00000377349 THSD1Q9NS62 852 aa19.36■□□□□ 0.69
CBWD3-204ENST00000377349 SPASTQ9UBP0 616 aa19.36■□□□□ 0.69
CBWD3-204ENST00000377349 CNOT8Q9UFF9 292 aaKnown RBP19.36■□□□□ 0.69
CBWD3-204ENST00000377349 MFHAS1Q9Y4C4 1052 aa19.36■□□□□ 0.69
CBWD3-204ENST00000377349 A0A1W2PQC6 194 aa19.35■□□□□ 0.69
CBWD3-204ENST00000377349 MUSKO15146 869 aa19.35■□□□□ 0.69
CBWD3-204ENST00000377349 IGSF6O95976 241 aa19.35■□□□□ 0.69
CBWD3-204ENST00000377349 FTLP02792 175 aaPredicted RBP19.35■□□□□ 0.69
CBWD3-204ENST00000377349 TIMP2P16035 220 aa19.35■□□□□ 0.69
CBWD3-204ENST00000377349 ADKP55263 362 aaKnown RBP19.35■□□□□ 0.69
CBWD3-204ENST00000377349 YPEL5P62699 121 aa19.35■□□□□ 0.69
CBWD3-204ENST00000377349 IQCB1Q15051 598 aa19.35■□□□□ 0.69
CBWD3-204ENST00000377349 PPP6R3Q5H9R7 873 aaPredicted RBP19.35■□□□□ 0.69
CBWD3-204ENST00000377349 ARHGAP40Q5TG30 622 aa19.35■□□□□ 0.69
CBWD3-204ENST00000377349 MACC1Q6ZN28 852 aa19.35■□□□□ 0.69
CBWD3-204ENST00000377349 RBM44Q6ZP01 1051 aaKnown RBP19.35■□□□□ 0.69
CBWD3-204ENST00000377349 TTC7BQ86TV6 843 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms