RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.29■□□□□ 0.36
TRIM27-201ENST00000377194 G3V2L1 256 aa17.29■□□□□ 0.36
TRIM27-201ENST00000377194 SLC10A3P09131 477 aa17.29■□□□□ 0.36
TRIM27-201ENST00000377194 ITGA7Q13683 1181 aa17.29■□□□□ 0.36
TRIM27-201ENST00000377194 FRG1Q14331 258 aaKnown RBP17.29■□□□□ 0.36
TRIM27-201ENST00000377194 SDHAF4Q5VUM1 108 aa17.29■□□□□ 0.36
TRIM27-201ENST00000377194 BTBD8Q5XKL5 378 aa17.29■□□□□ 0.36
TRIM27-201ENST00000377194 ERI1Q8IV48 349 aaKnown RBP17.29■□□□□ 0.36
TRIM27-201ENST00000377194 TSPAN14Q8NG11 270 aa17.29■□□□□ 0.36
TRIM27-201ENST00000377194 ERLEC1Q96DZ1 483 aa17.29■□□□□ 0.36
TRIM27-201ENST00000377194 PKP2Q99959 881 aa17.29■□□□□ 0.36
TRIM27-201ENST00000377194 ACSS2Q9NR19 701 aa17.29■□□□□ 0.36
TRIM27-201ENST00000377194 ABCC13Q9NSE7 274 aa17.29■□□□□ 0.36
TRIM27-201ENST00000377194 MPP6Q9NZW5 540 aa17.29■□□□□ 0.36
TRIM27-201ENST00000377194 FAM155AB1AL88 458 aaPredicted RBP17.29■□□□□ 0.36
TRIM27-201ENST00000377194 GRK2P25098 689 aa17.29■□□□□ 0.36
TRIM27-201ENST00000377194 RPL10P27635 214 aaKnown RBP17.29■□□□□ 0.36
TRIM27-201ENST00000377194 GABRB3P28472 473 aa17.29■□□□□ 0.36
TRIM27-201ENST00000377194 RXRGP48443 463 aa17.29■□□□□ 0.36
TRIM27-201ENST00000377194 PKNOX1P55347 436 aa17.29■□□□□ 0.36
TRIM27-201ENST00000377194 ABCE1P61221 599 aaKnown RBP17.29■□□□□ 0.36
TRIM27-201ENST00000377194 PRKCZQ05513 592 aa17.29■□□□□ 0.36
TRIM27-201ENST00000377194 KLF10Q13118 480 aa17.29■□□□□ 0.36
TRIM27-201ENST00000377194 ADGRE1Q14246 886 aa17.29■□□□□ 0.36
TRIM27-201ENST00000377194 MANEALQ5VSG8 457 aa17.29■□□□□ 0.36
TRIM27-201ENST00000377194 CCSAPQ6IQ19 270 aaPredicted RBP17.29■□□□□ 0.36
TRIM27-201ENST00000377194 NAPEPLDQ6IQ20 393 aa17.29■□□□□ 0.36
TRIM27-201ENST00000377194 C14orf80Q86SX3 495 aa17.29■□□□□ 0.36
TRIM27-201ENST00000377194 ZNF598Q86UK7 904 aaKnown RBP17.29■□□□□ 0.36
TRIM27-201ENST00000377194 TSGA13Q96PP4 275 aa17.29■□□□□ 0.36
TRIM27-201ENST00000377194 CORO1BQ9BR76 489 aa17.29■□□□□ 0.36
TRIM27-201ENST00000377194 ARMC7Q9H6L4 198 aa17.29■□□□□ 0.36
TRIM27-201ENST00000377194 SELENONQ9NZV5 590 aa17.29■□□□□ 0.36
TRIM27-201ENST00000377194 DSEQ9UL01 958 aa17.29■□□□□ 0.36
TRIM27-201ENST00000377194 DDHD2O94830 711 aa17.28■□□□□ 0.36
TRIM27-201ENST00000377194 MOCS2O96007 188 aaPredicted RBP17.28■□□□□ 0.36
TRIM27-201ENST00000377194 MYL4P12829 197 aa17.28■□□□□ 0.36
TRIM27-201ENST00000377194 ZNF24P17028 368 aa17.28■□□□□ 0.36
TRIM27-201ENST00000377194 CCNCP24863 283 aa17.28■□□□□ 0.36
TRIM27-201ENST00000377194 TSPY1Q01534 308 aa17.28■□□□□ 0.36
TRIM27-201ENST00000377194 GRM3Q14832 879 aa17.28■□□□□ 0.36
TRIM27-201ENST00000377194 POU6F1Q14863 301 aa17.28■□□□□ 0.36
TRIM27-201ENST00000377194 DENND5AQ6IQ26 1287 aa17.28■□□□□ 0.36
TRIM27-201ENST00000377194 ELMSAN1Q6PJG2 1045 aa17.28■□□□□ 0.36
TRIM27-201ENST00000377194 RTN4RL1Q86UN2 441 aaPredicted RBP17.28■□□□□ 0.36
TRIM27-201ENST00000377194 SPATA2LQ8IUW3 424 aaPredicted RBP17.28■□□□□ 0.36
TRIM27-201ENST00000377194 KLHDC8BQ8IXV7 354 aa17.28■□□□□ 0.36
TRIM27-201ENST00000377194 THEM5Q8N1Q8 247 aa17.28■□□□□ 0.36
TRIM27-201ENST00000377194 ATPAF2Q8N5M1 289 aa17.28■□□□□ 0.36
TRIM27-201ENST00000377194 IPMKQ8NFU5 416 aa17.28■□□□□ 0.36
TRIM27-201ENST00000377194 AGR3Q8TD06 166 aa17.28■□□□□ 0.36
TRIM27-201ENST00000377194 USP13Q92995 863 aaPredicted RBP17.28■□□□□ 0.36
TRIM27-201ENST00000377194 LENG8Q96PV6 779 aaPredicted RBP17.28■□□□□ 0.36
TRIM27-201ENST00000377194 KIFC1Q9BW19 673 aa17.28■□□□□ 0.36
TRIM27-201ENST00000377194 THEGQ9P2T0 379 aa17.28■□□□□ 0.36
TRIM27-201ENST00000377194 SLC39A10Q9ULF5 831 aa17.28■□□□□ 0.36
TRIM27-201ENST00000377194 CFLARO15519 480 aa17.28■□□□□ 0.36
TRIM27-201ENST00000377194 XRCC1P18887 633 aaPredicted RBP17.28■□□□□ 0.36
TRIM27-201ENST00000377194 SAT1P21673 171 aa17.28■□□□□ 0.36
TRIM27-201ENST00000377194 CCR1P32246 355 aa17.28■□□□□ 0.36
TRIM27-201ENST00000377194 HARS2P49590 506 aaKnown RBP17.28■□□□□ 0.36
TRIM27-201ENST00000377194 CDH15P55291 814 aa17.28■□□□□ 0.36
TRIM27-201ENST00000377194 YWHAHQ04917 246 aaPredicted RBP17.28■□□□□ 0.36
TRIM27-201ENST00000377194 PRPSAP1Q14558 356 aa17.28■□□□□ 0.36
TRIM27-201ENST00000377194 CCDC153Q494R4 210 aa17.28■□□□□ 0.36
TRIM27-201ENST00000377194 KDELC2Q7Z4H8 507 aa17.28■□□□□ 0.36
TRIM27-201ENST00000377194 ZBTB46Q86UZ6 589 aa17.28■□□□□ 0.36
TRIM27-201ENST00000377194 KLHDC9Q8NEP7 349 aa17.28■□□□□ 0.36
TRIM27-201ENST00000377194 PPP1R36Q96LQ0 422 aa17.28■□□□□ 0.36
TRIM27-201ENST00000377194 RTKNQ9BST9 563 aa17.28■□□□□ 0.36
TRIM27-201ENST00000377194 SMOC2Q9H3U7 446 aa17.28■□□□□ 0.36
TRIM27-201ENST00000377194 CAAP1Q9H8G2 361 aa17.28■□□□□ 0.36
TRIM27-201ENST00000377194 TBCCD1Q9NVR7 557 aa17.28■□□□□ 0.36
TRIM27-201ENST00000377194 STK39Q9UEW8 545 aa17.28■□□□□ 0.36
TRIM27-201ENST00000377194 RIMS3Q9UJD0 308 aa17.28■□□□□ 0.36
TRIM27-201ENST00000377194 A0A1W2PQH9 124 aa17.27■□□□□ 0.36
TRIM27-201ENST00000377194 HOXD12P35452 270 aa17.27■□□□□ 0.36
TRIM27-201ENST00000377194 NUDT2P50583 147 aa17.27■□□□□ 0.36
TRIM27-201ENST00000377194 NKX3-2P78367 333 aa17.27■□□□□ 0.36
TRIM27-201ENST00000377194 FLOT2Q14254 428 aa17.27■□□□□ 0.36
TRIM27-201ENST00000377194 SLC9B1Q4ZJI4 515 aa17.27■□□□□ 0.36
TRIM27-201ENST00000377194 BEND5Q7L4P6 421 aa17.27■□□□□ 0.36
TRIM27-201ENST00000377194 SCN4BQ8IWT1 228 aa17.27■□□□□ 0.36
TRIM27-201ENST00000377194 SLC15A3Q8IY34 581 aa17.27■□□□□ 0.36
TRIM27-201ENST00000377194 IL12RB2Q99665 862 aa17.27■□□□□ 0.36
TRIM27-201ENST00000377194 ATXN3LQ9H3M9 355 aa17.27■□□□□ 0.36
TRIM27-201ENST00000377194 COG4Q9H9E3 785 aa17.27■□□□□ 0.36
TRIM27-201ENST00000377194 HOXC13P31276 330 aa17.27■□□□□ 0.35
TRIM27-201ENST00000377194 SERPINB5P36952 375 aa17.27■□□□□ 0.35
TRIM27-201ENST00000377194 GPR15P49685 360 aa17.27■□□□□ 0.35
TRIM27-201ENST00000377194 THOP1P52888 689 aa17.27■□□□□ 0.35
TRIM27-201ENST00000377194 RELAQ04206 551 aa17.27■□□□□ 0.35
TRIM27-201ENST00000377194 MAPRE1Q15691 268 aaKnown RBP17.27■□□□□ 0.35
TRIM27-201ENST00000377194 TRIM71Q2Q1W2 868 aaKnown RBP17.27■□□□□ 0.35
TRIM27-201ENST00000377194 SLC39A12Q504Y0 691 aa17.27■□□□□ 0.35
TRIM27-201ENST00000377194 PPM1LQ5SGD2 360 aa17.27■□□□□ 0.35
TRIM27-201ENST00000377194 BORAQ6PGQ7 559 aa17.27■□□□□ 0.35
TRIM27-201ENST00000377194 ZC3HC1Q86WB0 502 aaKnown RBP17.27■□□□□ 0.35
TRIM27-201ENST00000377194 DENND6AQ8IWF6 608 aa17.27■□□□□ 0.35
TRIM27-201ENST00000377194 TMEM151AQ8N4L1 468 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms