RNA–Protein interactions for RNA: ENST00000377078.2

USP11-202, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 1,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-202ENST00000377078 FFAR2O15552 330 aa17.32■□□□□ 0.36
USP11-202ENST00000377078 CSF2P04141 144 aa17.32■□□□□ 0.36
USP11-202ENST00000377078 JUPP14923 745 aa17.32■□□□□ 0.36
USP11-202ENST00000377078 NME1P15531 152 aaKnown RBP17.32■□□□□ 0.36
USP11-202ENST00000377078 AP1S1P61966 158 aa17.32■□□□□ 0.36
USP11-202ENST00000377078 BCL2L1Q07817 233 aa17.32■□□□□ 0.36
USP11-202ENST00000377078 NSUN2Q08J23 767 aaKnown RBP eCLIP17.32■□□□□ 0.36
USP11-202ENST00000377078 ZNF235Q14590 738 aa17.32■□□□□ 0.36
USP11-202ENST00000377078 TMEM52BQ4KMG9 183 aa17.32■□□□□ 0.36
USP11-202ENST00000377078 SPECC1LQ69YQ0 1117 aa17.32■□□□□ 0.36
USP11-202ENST00000377078 POLNQ7Z5Q5 900 aa17.32■□□□□ 0.36
USP11-202ENST00000377078 SLC25A45Q8N413 288 aa17.32■□□□□ 0.36
USP11-202ENST00000377078 NPWQ8N729 165 aa17.32■□□□□ 0.36
USP11-202ENST00000377078 TSEN2Q8NCE0 465 aaKnown RBP17.32■□□□□ 0.36
USP11-202ENST00000377078 BTN2A2Q8WVV5 523 aa17.32■□□□□ 0.36
USP11-202ENST00000377078 CTNNBL1Q8WYA6 563 aaPredicted RBP17.32■□□□□ 0.36
USP11-202ENST00000377078 TSC1Q92574 1164 aa17.32■□□□□ 0.36
USP11-202ENST00000377078 CSPG4P5Q96PW8 444 aa17.32■□□□□ 0.36
USP11-202ENST00000377078 KLF6Q99612 283 aaPredicted RBP17.32■□□□□ 0.36
USP11-202ENST00000377078 NLGN3Q9NZ94 848 aa17.32■□□□□ 0.36
USP11-202ENST00000377078 FREM2Q5SZK8 3169 aa17.32■□□□□ 0.36
USP11-202ENST00000377078 RIOK3O14730 519 aaKnown RBP17.31■□□□□ 0.36
USP11-202ENST00000377078 SPINT1O43278 529 aa17.31■□□□□ 0.36
USP11-202ENST00000377078 SIGLEC6O43699 453 aa17.31■□□□□ 0.36
USP11-202ENST00000377078 RARAP10276 462 aa17.31■□□□□ 0.36
USP11-202ENST00000377078 ACP1P24666 158 aa17.31■□□□□ 0.36
USP11-202ENST00000377078 NFKBIAP25963 317 aa17.31■□□□□ 0.36
USP11-202ENST00000377078 IL1R2P27930 398 aa17.31■□□□□ 0.36
USP11-202ENST00000377078 HSPA9P38646 679 aaKnown RBP17.31■□□□□ 0.36
USP11-202ENST00000377078 PFN3P60673 137 aa17.31■□□□□ 0.36
USP11-202ENST00000377078 E2F1Q01094 437 aa17.31■□□□□ 0.36
USP11-202ENST00000377078 FZD2Q14332 565 aa17.31■□□□□ 0.36
USP11-202ENST00000377078 PROX2Q3B8N5 592 aa17.31■□□□□ 0.36
USP11-202ENST00000377078 CAMK1DQ8IU85 385 aa17.31■□□□□ 0.36
USP11-202ENST00000377078 ATPAF2Q8N5M1 289 aa17.31■□□□□ 0.36
USP11-202ENST00000377078 PDCD7Q8N8D1 485 aaKnown RBP17.31■□□□□ 0.36
USP11-202ENST00000377078 OR8K1Q8NGG5 319 aa17.31■□□□□ 0.36
USP11-202ENST00000377078 ZNF564Q8TBZ8 553 aaPredicted RBP17.31■□□□□ 0.36
USP11-202ENST00000377078 VOPP1Q96AW1 172 aa17.31■□□□□ 0.36
USP11-202ENST00000377078 CENPTQ96BT3 561 aa17.31■□□□□ 0.36
USP11-202ENST00000377078 PSKH2Q96QS6 385 aa17.31■□□□□ 0.36
USP11-202ENST00000377078 TSPY26PQ9H489 355 aa17.31■□□□□ 0.36
USP11-202ENST00000377078 USP29Q9HBJ7 922 aa17.31■□□□□ 0.36
USP11-202ENST00000377078 PCDH12Q9NPG4 1184 aa17.31■□□□□ 0.36
USP11-202ENST00000377078 UCKL1Q9NWZ5 548 aa17.31■□□□□ 0.36
USP11-202ENST00000377078 NCKIPSDQ9NZQ3 722 aa17.31■□□□□ 0.36
USP11-202ENST00000377078 CTTNBP2NLQ9P2B4 639 aa17.31■□□□□ 0.36
USP11-202ENST00000377078 RCOR3Q9P2K3 495 aaPredicted RBP17.31■□□□□ 0.36
USP11-202ENST00000377078 UVRAGQ9P2Y5 699 aa17.31■□□□□ 0.36
USP11-202ENST00000377078 ATP8A1Q9Y2Q0 1164 aa17.31■□□□□ 0.36
USP11-202ENST00000377078 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.3■□□□□ 0.36
USP11-202ENST00000377078 SRRM3A6NNA2 597 aaPredicted RBP17.3■□□□□ 0.36
USP11-202ENST00000377078 TRIM38O00635 465 aa17.3■□□□□ 0.36
USP11-202ENST00000377078 SCAMP1O15126 338 aa17.3■□□□□ 0.36
USP11-202ENST00000377078 LZTS3O60299 673 aaPredicted RBP17.3■□□□□ 0.36
USP11-202ENST00000377078 H2AFZP0C0S5 128 aa17.3■□□□□ 0.36
USP11-202ENST00000377078 JUNDP17535 347 aa17.3■□□□□ 0.36
USP11-202ENST00000377078 AMPD1P23109 780 aa17.3■□□□□ 0.36
USP11-202ENST00000377078 HNRNPH3P31942 346 aaKnown RBP17.3■□□□□ 0.36
USP11-202ENST00000377078 SCNN1BP51168 640 aa17.3■□□□□ 0.36
USP11-202ENST00000377078 DUSP3P51452 185 aaPredicted RBP17.3■□□□□ 0.36
USP11-202ENST00000377078 LBRQ14739 615 aaKnown RBP17.3■□□□□ 0.36
USP11-202ENST00000377078 LRRC14Q15048 493 aa17.3■□□□□ 0.36
USP11-202ENST00000377078 ZNF542PQ5EBM4 170 aa17.3■□□□□ 0.36
USP11-202ENST00000377078 H2AFVQ71UI9 128 aa17.3■□□□□ 0.36
USP11-202ENST00000377078 PROSER1Q86XN7 944 aa17.3■□□□□ 0.36
USP11-202ENST00000377078 ZNF548Q8NEK5 533 aaPredicted RBP17.3■□□□□ 0.36
USP11-202ENST00000377078 BTBD6Q96KE9 485 aa17.3■□□□□ 0.36
USP11-202ENST00000377078 ANP32EQ9BTT0 268 aa17.3■□□□□ 0.36
USP11-202ENST00000377078 SLC13A1Q9BZW2 595 aa17.3■□□□□ 0.36
USP11-202ENST00000377078 CSNK1G3Q9Y6M4 447 aa17.3■□□□□ 0.36
USP11-202ENST00000377078 PTPRBP23467 1997 aa17.29■□□□□ 0.36
USP11-202ENST00000377078 GOLGA4Q13439 2230 aaKnown RBP17.29■□□□□ 0.36
USP11-202ENST00000377078 A0A1W2PQ67 120 aa17.29■□□□□ 0.36
USP11-202ENST00000377078 FAM149AA5PLN7 773 aa17.29■□□□□ 0.36
USP11-202ENST00000377078 TMEM110-MUSTN1A8MSY1 372 aa17.29■□□□□ 0.36
USP11-202ENST00000377078 C6P13671 934 aa17.29■□□□□ 0.36
USP11-202ENST00000377078 TCF4P15884 667 aa17.29■□□□□ 0.36
USP11-202ENST00000377078 HTR1BP28222 390 aa17.29■□□□□ 0.36
USP11-202ENST00000377078 IGFALSP35858 605 aa17.29■□□□□ 0.36
USP11-202ENST00000377078 EIF4A3P38919 411 aaKnown RBP17.29■□□□□ 0.36
USP11-202ENST00000377078 MMP12P39900 470 aa17.29■□□□□ 0.36
USP11-202ENST00000377078 BLKP51451 505 aa17.29■□□□□ 0.36
USP11-202ENST00000377078 CDH6P55285 790 aa17.29■□□□□ 0.36
USP11-202ENST00000377078 SLC25A11Q02978 314 aaKnown RBP17.29■□□□□ 0.36
USP11-202ENST00000377078 SLC18A3Q16572 532 aa17.29■□□□□ 0.36
USP11-202ENST00000377078 MACC1Q6ZN28 852 aa17.29■□□□□ 0.36
USP11-202ENST00000377078 ARHGAP36Q6ZRI8 547 aa17.29■□□□□ 0.36
USP11-202ENST00000377078 LRRC49Q8IUZ0 686 aa17.29■□□□□ 0.36
USP11-202ENST00000377078 ATL2Q8NHH9 583 aa17.29■□□□□ 0.36
USP11-202ENST00000377078 PCDH18Q9HCL0 1135 aa17.29■□□□□ 0.36
USP11-202ENST00000377078 HAUS2Q9NVX0 235 aa17.29■□□□□ 0.36
USP11-202ENST00000377078 SPASTQ9UBP0 616 aa17.29■□□□□ 0.36
USP11-202ENST00000377078 DMXL2Q8TDJ6 3036 aa17.29■□□□□ 0.36
USP11-202ENST00000377078 CFAP69A5D8W1 941 aa17.28■□□□□ 0.36
USP11-202ENST00000377078 TRABD2BA6NFA1 517 aa17.28■□□□□ 0.36
USP11-202ENST00000377078 ZZEF1O43149 2961 aa17.28■□□□□ 0.36
USP11-202ENST00000377078 AQP9O43315 295 aa17.28■□□□□ 0.36
USP11-202ENST00000377078 AKR1B10O60218 316 aa17.28■□□□□ 0.36
USP11-202ENST00000377078 BUB1BO60566 1050 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms