RNA–Protein interactions for RNA: ENST00000377067.8

GPC5-201, Transcript of glypican 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC5, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC5-201ENST00000377067 TSPAN16Q9UKR8 245 aa19.25■□□□□ 0.67
GPC5-201ENST00000377067 DOCK5Q9H7D0 1870 aa19.24■□□□□ 0.67
GPC5-201ENST00000377067 APOA4P06727 396 aa19.24■□□□□ 0.67
GPC5-201ENST00000377067 PSMA4P25789 261 aaKnown RBP19.24■□□□□ 0.67
GPC5-201ENST00000377067 YWHAQP27348 245 aa19.24■□□□□ 0.67
GPC5-201ENST00000377067 RPS9P46781 194 aaKnown RBP19.24■□□□□ 0.67
GPC5-201ENST00000377067 PLA2G16P53816 162 aa19.24■□□□□ 0.67
GPC5-201ENST00000377067 PIGFQ07326 219 aa19.24■□□□□ 0.67
GPC5-201ENST00000377067 CAPRIN1Q14444 709 aaKnown RBP19.24■□□□□ 0.67
GPC5-201ENST00000377067 IQSEC1Q6DN90 963 aa19.24■□□□□ 0.67
GPC5-201ENST00000377067 ANKRD13BQ86YJ7 626 aa19.24■□□□□ 0.67
GPC5-201ENST00000377067 COLGALT2Q8IYK4 626 aa19.24■□□□□ 0.67
GPC5-201ENST00000377067 TBCBQ99426 244 aa19.24■□□□□ 0.67
GPC5-201ENST00000377067 FTHL17Q9BXU8 183 aa19.24■□□□□ 0.67
GPC5-201ENST00000377067 DGCR6LQ9BY27 220 aa19.24■□□□□ 0.67
GPC5-201ENST00000377067 GPN2Q9H9Y4 310 aaPredicted RBP19.24■□□□□ 0.67
GPC5-201ENST00000377067 CHRAC1Q9NRG0 131 aa19.24■□□□□ 0.67
GPC5-201ENST00000377067 RAD54BQ9Y620 910 aa19.24■□□□□ 0.67
GPC5-201ENST00000377067 LTBP1Q14766 1721 aa19.24■□□□□ 0.67
GPC5-201ENST00000377067 KCNK1O00180 336 aa19.24■□□□□ 0.67
GPC5-201ENST00000377067 OGTO15294 1046 aa19.24■□□□□ 0.67
GPC5-201ENST00000377067 MSI1O43347 362 aaKnown RBP19.24■□□□□ 0.67
GPC5-201ENST00000377067 CILPO75339 1184 aa19.24■□□□□ 0.67
GPC5-201ENST00000377067 NPM3O75607 178 aaKnown RBP19.24■□□□□ 0.67
GPC5-201ENST00000377067 RGS20O76081 388 aa19.24■□□□□ 0.67
GPC5-201ENST00000377067 S100BP04271 92 aaPredicted RBP19.24■□□□□ 0.67
GPC5-201ENST00000377067 TPH1P17752 444 aa19.24■□□□□ 0.67
GPC5-201ENST00000377067 HOXD11P31277 338 aaPredicted RBP19.24■□□□□ 0.67
GPC5-201ENST00000377067 ADAM17P78536 824 aa19.24■□□□□ 0.67
GPC5-201ENST00000377067 INPP5AQ14642 412 aa19.24■□□□□ 0.67
GPC5-201ENST00000377067 SMUG1Q53HV7 270 aa19.24■□□□□ 0.67
GPC5-201ENST00000377067 ABHD15Q6UXT9 468 aa19.24■□□□□ 0.67
GPC5-201ENST00000377067 SPRED1Q7Z699 444 aa19.24■□□□□ 0.67
GPC5-201ENST00000377067 NT5DC4Q86YG4 428 aa19.24■□□□□ 0.67
GPC5-201ENST00000377067 TMEM192Q8IY95 271 aa19.24■□□□□ 0.67
GPC5-201ENST00000377067 CENPLQ8N0S6 344 aaPredicted RBP19.24■□□□□ 0.67
GPC5-201ENST00000377067 NXNL1Q96CM4 212 aa19.24■□□□□ 0.67
GPC5-201ENST00000377067 MUS81Q96NY9 551 aa19.24■□□□□ 0.67
GPC5-201ENST00000377067 IL12RB2Q99665 862 aa19.24■□□□□ 0.67
GPC5-201ENST00000377067 BCO2Q9BYV7 579 aa19.24■□□□□ 0.67
GPC5-201ENST00000377067 GBA2Q9HCG7 927 aaPredicted RBP19.24■□□□□ 0.67
GPC5-201ENST00000377067 HMG20AQ9NP66 347 aa19.24■□□□□ 0.67
GPC5-201ENST00000377067 CPSF3Q9UKF6 684 aaKnown RBP19.24■□□□□ 0.67
GPC5-201ENST00000377067 TIMM44O43615 452 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 BCAS1O75363 584 aaPredicted RBP19.23■□□□□ 0.67
GPC5-201ENST00000377067 MTHFD1P11586 935 aaKnown RBP19.23■□□□□ 0.67
GPC5-201ENST00000377067 TGM1P22735 817 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 SHMT2P34897 504 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 NR4A2P43354 598 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 NR2C2P49116 596 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 ANO4Q32M45 955 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 ARL13BQ3SXY8 428 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 PID1Q7Z2X4 250 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 ZNF567Q8N184 647 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 CLIP4Q8N3C7 705 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 CCDC185Q8N715 623 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 TXNDC5Q8NBS9 432 aaKnown RBP19.23■□□□□ 0.67
GPC5-201ENST00000377067 ADNPQ9H2P0 1102 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 ANKMY1Q9P2S6 941 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 VANGL2Q9ULK5 521 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 AXIN1O15169 862 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 SLC35E2BP0CK96 405 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 IFRD2Q12894 506 aaPredicted RBP19.23■□□□□ 0.67
GPC5-201ENST00000377067 POLD3Q15054 466 aaPredicted RBP19.23■□□□□ 0.67
GPC5-201ENST00000377067 OTUD3Q5T2D3 398 aaPredicted RBP19.23■□□□□ 0.67
GPC5-201ENST00000377067 TMTC4Q5T4D3 741 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 GTF2IRD2BQ6EKJ0 949 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 PMF1Q6P1K2 205 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 CRTC3Q6UUV7 619 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 GTF2IRD2Q86UP8 949 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 ADGRG5Q8IZF4 528 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 RDH11Q8TC12 318 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 KHSRPQ92945 711 aaKnown RBP eCLIP19.23■□□□□ 0.675e-6■■□□□ 13.6
GPC5-201ENST00000377067 SLC25A23Q9BV35 468 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 DNAI2Q9GZS0 605 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 SNX25Q9H3E2 840 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 ATP13A3Q9H7F0 1226 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 WDR81Q562E7 1941 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 NEK2P51955 445 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 MAPRE1Q15691 268 aaKnown RBP19.23■□□□□ 0.67
GPC5-201ENST00000377067 TBPL2Q6SJ96 375 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 SAPCD2Q86UD0 394 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 IFNEQ86WN2 208 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 SFRP1Q8N474 314 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 CNDP2Q96KP4 475 aaKnown RBP19.23■□□□□ 0.67
GPC5-201ENST00000377067 FUNDC2Q9BWH2 189 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 POMKQ9H5K3 350 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 TRPV5Q9NQA5 729 aa19.23■□□□□ 0.67
GPC5-201ENST00000377067 ANKRD34BA5PLL1 514 aa19.22■□□□□ 0.67
GPC5-201ENST00000377067 AURKAO14965 403 aa19.22■□□□□ 0.67
GPC5-201ENST00000377067 INPP4BO15327 924 aa19.22■□□□□ 0.67
GPC5-201ENST00000377067 RSL1D1O76021 490 aaKnown RBP19.22■□□□□ 0.67
GPC5-201ENST00000377067 PFKMP08237 780 aa19.22■□□□□ 0.67
GPC5-201ENST00000377067 AXLP30530 894 aa19.22■□□□□ 0.67
GPC5-201ENST00000377067 IFITM2Q01629 132 aa19.22■□□□□ 0.67
GPC5-201ENST00000377067 DPYSL2Q16555 572 aa19.22■□□□□ 0.67
GPC5-201ENST00000377067 BROXQ5VW32 411 aa19.22■□□□□ 0.67
GPC5-201ENST00000377067 IL31Q6EBC2 164 aa19.22■□□□□ 0.67
GPC5-201ENST00000377067 FAM45BPQ6NSW5 357 aa19.22■□□□□ 0.67
GPC5-201ENST00000377067 PODNQ7Z5L7 613 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms