RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 SLC2A14Q8TDB8 520 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 SLC35F5Q8WV83 523 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 LPGAT1Q92604 370 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 CNOT6Q9ULM6 557 aaKnown RBP13.04□□□□□ -0.32
MSH5-204ENST00000375755 PCDHGA7Q9Y5G6 932 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 COPG1Q9Y678 874 aaKnown RBP13.04□□□□□ -0.32
MSH5-204ENST00000375755 C2CD4BA6NLJ0 364 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 SLC22A2O15244 555 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 SEPT4O43236 478 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 AKAP10O43572 662 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 CD52P31358 61 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 EIF2B2P49770 351 aaKnown RBP13.04□□□□□ -0.32
MSH5-204ENST00000375755 RPL14P50914 215 aaKnown RBP13.04□□□□□ -0.32
MSH5-204ENST00000375755 RALGDSQ12967 914 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 ITGA7Q13683 1181 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 BCL2A1Q16548 175 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 ANKRD26P1Q6NSI1 321 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 CDKL3Q8IVW4 592 aaPredicted RBP13.04□□□□□ -0.32
MSH5-204ENST00000375755 HHIPL1Q96JK4 782 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 DOK1Q99704 481 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 DHX35Q9H5Z1 703 aaKnown RBP13.04□□□□□ -0.32
MSH5-204ENST00000375755 CAB39LQ9H9S4 337 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 RAP2CQ9Y3L5 183 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 ZNF638Q14966 1978 aaKnown RBP13.04□□□□□ -0.32
MSH5-204ENST00000375755 KCNU1A8MYU2 1149 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 LSM1O15116 133 aaKnown RBP13.03□□□□□ -0.32
MSH5-204ENST00000375755 TIPRLO75663 272 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 PIGNO95427 931 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 TFEBP19484 476 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 AXLP30530 894 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 GP5P40197 560 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 MAGEA12P43365 314 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 CLCNKBP51801 687 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 NSUN2Q08J23 767 aaKnown RBP eCLIP13.03□□□□□ -0.32
MSH5-204ENST00000375755 IRF5Q13568 498 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 PDK2Q15119 407 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 CYP2A13Q16696 494 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 XKR4Q5GH76 650 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 WSCD1Q658N2 575 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 GK5Q6ZS86 529 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 CCDC80Q76M96 950 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 LRRC52Q8N7C0 313 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 CNTD1Q8N815 330 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 AGAP3Q96P47 875 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 SMOXQ9NWM0 555 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 TXNDC16Q9P2K2 825 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 SUCOQ9UBS9 1254 aaKnown RBP13.03□□□□□ -0.32
MSH5-204ENST00000375755 ZDHHC2Q9UIJ5 367 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 CASTOR2A6NHX0 329 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 F8W810 466 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 SEC24DO94855 1032 aaPredicted RBP13.03□□□□□ -0.32
MSH5-204ENST00000375755 KCNE1P15382 129 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 DCKP27707 260 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 PRKCQQ04759 706 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 RAB39AQ14964 217 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 NR1D2Q14995 579 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 MAP7D1Q3KQU3 841 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 ARL13AQ5H913 290 aaPredicted RBP13.03□□□□□ -0.32
MSH5-204ENST00000375755 PPP4R4Q6NUP7 873 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 KCNT2Q6UVM3 1135 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 HACE1Q8IYU2 909 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 SLC15A4Q8N697 577 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 UHRF1Q96T88 793 aaPredicted RBP13.03□□□□□ -0.32
MSH5-204ENST00000375755 FAM105AQ9NUU6 356 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 TRPV2Q9Y5S1 764 aa13.03□□□□□ -0.32
MSH5-204ENST00000375755 DLGAP1O14490 977 aa13.02□□□□□ -0.32
MSH5-204ENST00000375755 PGAM1P18669 254 aa13.02□□□□□ -0.32
MSH5-204ENST00000375755 SLC7A1P30825 629 aa13.02□□□□□ -0.32
MSH5-204ENST00000375755 ETFBP38117 255 aa13.02□□□□□ -0.32
MSH5-204ENST00000375755 SCNN1GP51170 649 aa13.02□□□□□ -0.32
MSH5-204ENST00000375755 MOGQ16653 247 aa13.02□□□□□ -0.32
MSH5-204ENST00000375755 C4orf22Q6V702 233 aa13.02□□□□□ -0.32
MSH5-204ENST00000375755 ZNF784Q8NCA9 323 aaPredicted RBP13.02□□□□□ -0.32
MSH5-204ENST00000375755 APPL2Q8NEU8 664 aa13.02□□□□□ -0.32
MSH5-204ENST00000375755 HASPINQ8TF76 798 aa13.02□□□□□ -0.32
MSH5-204ENST00000375755 NGRNQ9NPE2 291 aaKnown RBP13.02□□□□□ -0.32
MSH5-204ENST00000375755 SYBUQ9NX95 663 aa13.02□□□□□ -0.32
MSH5-204ENST00000375755 SFMBT1Q9UHJ3 866 aa13.02□□□□□ -0.32
MSH5-204ENST00000375755 GNPTGQ9UJJ9 305 aa13.02□□□□□ -0.32
MSH5-204ENST00000375755 CDYLQ9Y232 598 aa13.02□□□□□ -0.32
MSH5-204ENST00000375755 MYO18AQ92614 2054 aaKnown RBP13.02□□□□□ -0.32
MSH5-204ENST00000375755 A0A096LPK6 155 aa13.02□□□□□ -0.33
MSH5-204ENST00000375755 TCRBV3S1A0A5B6 114 aa13.02□□□□□ -0.33
MSH5-204ENST00000375755 SAC3D1A6NKF1 404 aa13.02□□□□□ -0.33
MSH5-204ENST00000375755 ADSLP30566 484 aaPredicted RBP13.02□□□□□ -0.33
MSH5-204ENST00000375755 GARSP41250 739 aaKnown RBP13.02□□□□□ -0.33
MSH5-204ENST00000375755 TAF6P49848 677 aa13.02□□□□□ -0.33
MSH5-204ENST00000375755 GALNT2Q10471 571 aa13.02□□□□□ -0.33
MSH5-204ENST00000375755 NAB1Q13506 487 aa13.02□□□□□ -0.33
MSH5-204ENST00000375755 SLC2A7Q6PXP3 512 aa13.02□□□□□ -0.33
MSH5-204ENST00000375755 SERINC5Q86VE9 423 aa13.02□□□□□ -0.33
MSH5-204ENST00000375755 ZNF420Q8TAQ5 688 aaPredicted RBP13.02□□□□□ -0.33
MSH5-204ENST00000375755 PPWD1Q96BP3 646 aaKnown RBP13.02□□□□□ -0.33
MSH5-204ENST00000375755 SNRNP25Q9BV90 132 aaKnown RBP13.02□□□□□ -0.33
MSH5-204ENST00000375755 TRPC7Q9HCX4 862 aa13.02□□□□□ -0.33
MSH5-204ENST00000375755 OXSMQ9NWU1 459 aa13.02□□□□□ -0.33
MSH5-204ENST00000375755 PTBP2Q9UKA9 531 aaKnown RBP13.02□□□□□ -0.33
MSH5-204ENST00000375755 TSC22D4Q9Y3Q8 395 aa13.02□□□□□ -0.33
MSH5-204ENST00000375755 PRORSD1PA6NEY8 169 aa13.02□□□□□ -0.33
MSH5-204ENST00000375755 TRIM64A6NGJ6 449 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 199.7 ms