RNA–Protein interactions for RNA: ENST00000375640.7

C6orf48-205, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 1,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-205ENST00000375640 GPR27Q9NS67 375 aa20.18■□□□□ 0.82
C6orf48-205ENST00000375640 TOR4AQ9NXH8 423 aa20.18■□□□□ 0.82
C6orf48-205ENST00000375640 FTSJ1Q9UET6 329 aa20.18■□□□□ 0.82
C6orf48-205ENST00000375640 PCNX2A6NKB5 2137 aa20.18■□□□□ 0.82
C6orf48-205ENST00000375640 RIOK3O14730 519 aaKnown RBP20.17■□□□□ 0.82
C6orf48-205ENST00000375640 MUSKO15146 869 aa20.17■□□□□ 0.82
C6orf48-205ENST00000375640 POLR2LP62875 67 aaKnown RBP20.17■□□□□ 0.82
C6orf48-205ENST00000375640 MESDQ14696 234 aa20.17■□□□□ 0.82
C6orf48-205ENST00000375640 TCEAL1Q15170 157 aa20.17■□□□□ 0.82
C6orf48-205ENST00000375640 ANKRD20A8PQ5CZ79 823 aa20.17■□□□□ 0.82
C6orf48-205ENST00000375640 KANSL1Q7Z3B3 1105 aa20.17■□□□□ 0.82
C6orf48-205ENST00000375640 CPNE8Q86YQ8 564 aa20.17■□□□□ 0.82
C6orf48-205ENST00000375640 ATPAF2Q8N5M1 289 aa20.17■□□□□ 0.82
C6orf48-205ENST00000375640 EID2Q8N6I1 236 aa20.17■□□□□ 0.82
C6orf48-205ENST00000375640 ECHDC3Q96DC8 303 aa20.17■□□□□ 0.82
C6orf48-205ENST00000375640 PCDH12Q9NPG4 1184 aa20.17■□□□□ 0.82
C6orf48-205ENST00000375640 MSRB2Q9Y3D2 182 aa20.17■□□□□ 0.82
C6orf48-205ENST00000375640 CHD5Q8TDI0 1954 aa20.16■□□□□ 0.82
C6orf48-205ENST00000375640 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.16■□□□□ 0.82
C6orf48-205ENST00000375640 CFAP69A5D8W1 941 aa20.16■□□□□ 0.82
C6orf48-205ENST00000375640 TMEM110-MUSTN1A8MSY1 372 aa20.16■□□□□ 0.82
C6orf48-205ENST00000375640 LDOC1O95751 146 aaPredicted RBP20.16■□□□□ 0.82
C6orf48-205ENST00000375640 GJC1P36383 396 aa20.16■□□□□ 0.82
C6orf48-205ENST00000375640 PFN3P60673 137 aa20.16■□□□□ 0.82
C6orf48-205ENST00000375640 ZNF235Q14590 738 aa20.16■□□□□ 0.82
C6orf48-205ENST00000375640 PAFAH1B3Q15102 231 aaKnown RBP20.16■□□□□ 0.82
C6orf48-205ENST00000375640 MARC1Q5VT66 337 aa20.16■□□□□ 0.82
C6orf48-205ENST00000375640 PTAR1Q7Z6K3 402 aaPredicted RBP20.16■□□□□ 0.82
C6orf48-205ENST00000375640 SLC22A18ASQ8N1D0 253 aa20.16■□□□□ 0.82
C6orf48-205ENST00000375640 TC2NQ8N9U0 490 aa20.16■□□□□ 0.82
C6orf48-205ENST00000375640 PCDH19Q8TAB3 1148 aa20.16■□□□□ 0.82
C6orf48-205ENST00000375640 RFFLQ8WZ73 363 aa20.16■□□□□ 0.82
C6orf48-205ENST00000375640 FAF2Q96CS3 445 aa20.16■□□□□ 0.82
C6orf48-205ENST00000375640 ATP8A1Q9Y2Q0 1164 aa20.16■□□□□ 0.82
C6orf48-205ENST00000375640 SPTY2D1-AS1A0A0U1RR47 76 aa20.15■□□□□ 0.82
C6orf48-205ENST00000375640 A0A1W2PQ67 120 aa20.15■□□□□ 0.82
C6orf48-205ENST00000375640 TRAFD1O14545 582 aaPredicted RBP20.15■□□□□ 0.82
C6orf48-205ENST00000375640 TOR1BO14657 336 aa20.15■□□□□ 0.82
C6orf48-205ENST00000375640 CR2P20023 1033 aa20.15■□□□□ 0.82
C6orf48-205ENST00000375640 RALGPS1Q5JS13 557 aa20.15■□□□□ 0.82
C6orf48-205ENST00000375640 ZFYVE27Q5T4F4 411 aa20.15■□□□□ 0.82
C6orf48-205ENST00000375640 ZSWIM9Q86XI8 627 aa20.15■□□□□ 0.82
C6orf48-205ENST00000375640 SLC25A45Q8N413 288 aa20.15■□□□□ 0.82
C6orf48-205ENST00000375640 SPOCK2Q92563 424 aa20.15■□□□□ 0.82
C6orf48-205ENST00000375640 CNDP2Q96KP4 475 aaKnown RBP20.15■□□□□ 0.82
C6orf48-205ENST00000375640 NUDCD1Q96RS6 583 aa20.15■□□□□ 0.82
C6orf48-205ENST00000375640 MGME1Q9BQP7 344 aa20.15■□□□□ 0.82
C6orf48-205ENST00000375640 WRAP53Q9BUR4 548 aaKnown RBP20.15■□□□□ 0.82
C6orf48-205ENST00000375640 RBSNQ9H1K0 784 aa20.15■□□□□ 0.82
C6orf48-205ENST00000375640 KLK13Q9UKR3 277 aa20.15■□□□□ 0.82
C6orf48-205ENST00000375640 PCDHGA1Q9Y5H4 931 aa20.15■□□□□ 0.82
C6orf48-205ENST00000375640 ENC1O14682 589 aa20.14■□□□□ 0.81
C6orf48-205ENST00000375640 DGKAP23743 735 aa20.14■□□□□ 0.81
C6orf48-205ENST00000375640 KDELR1P24390 212 aa20.14■□□□□ 0.81
C6orf48-205ENST00000375640 SLC1A1P43005 524 aa20.14■□□□□ 0.81
C6orf48-205ENST00000375640 MMP13P45452 471 aa20.14■□□□□ 0.81
C6orf48-205ENST00000375640 YPEL5P62699 121 aa20.14■□□□□ 0.81
C6orf48-205ENST00000375640 GALNT2Q10471 571 aa20.14■□□□□ 0.81
C6orf48-205ENST00000375640 FZD2Q14332 565 aa20.14■□□□□ 0.81
C6orf48-205ENST00000375640 LRRC38Q5VT99 294 aa20.14■□□□□ 0.81
C6orf48-205ENST00000375640 NCBP2-AS2Q69YL0 99 aa20.14■□□□□ 0.81
C6orf48-205ENST00000375640 PGBD5Q8N414 524 aa20.14■□□□□ 0.81
C6orf48-205ENST00000375640 TEX26Q8N6G2 289 aa20.14■□□□□ 0.81
C6orf48-205ENST00000375640 PAF1Q8N7H5 531 aa20.14■□□□□ 0.81
C6orf48-205ENST00000375640 MRFAP1L1Q96HT8 127 aa20.14■□□□□ 0.81
C6orf48-205ENST00000375640 ANP32EQ9BTT0 268 aa20.14■□□□□ 0.81
C6orf48-205ENST00000375640 GOLGA8CPA6NN73 597 aa20.13■□□□□ 0.81
C6orf48-205ENST00000375640 ZNF487B1APH4 448 aa20.13■□□□□ 0.81
C6orf48-205ENST00000375640 HTRA2O43464 458 aaPredicted RBP20.13■□□□□ 0.81
C6orf48-205ENST00000375640 SDC3O75056 442 aa20.13■□□□□ 0.81
C6orf48-205ENST00000375640 SOCS5O75159 536 aa20.13■□□□□ 0.81
C6orf48-205ENST00000375640 C1SP09871 688 aa20.13■□□□□ 0.81
C6orf48-205ENST00000375640 CDK4P11802 303 aa20.13■□□□□ 0.81
C6orf48-205ENST00000375640 MMP12P39900 470 aa20.13■□□□□ 0.81
C6orf48-205ENST00000375640 GARSP41250 739 aaKnown RBP20.13■□□□□ 0.81
C6orf48-205ENST00000375640 MAGEA1P43355 309 aa20.13■□□□□ 0.81
C6orf48-205ENST00000375640 LIG3P49916 1009 aa20.13■□□□□ 0.81
C6orf48-205ENST00000375640 ZNF75DP51815 510 aa20.13■□□□□ 0.81
C6orf48-205ENST00000375640 HNRNPKP61978 463 aaKnown RBP eCLIP20.13■□□□□ 0.81
C6orf48-205ENST00000375640 ZNF211Q13398 564 aaPredicted RBP20.13■□□□□ 0.81
C6orf48-205ENST00000375640 PDE1CQ14123 709 aaPredicted RBP20.13■□□□□ 0.81
C6orf48-205ENST00000375640 PTK2BQ14289 1009 aa20.13■□□□□ 0.81
C6orf48-205ENST00000375640 AGERQ15109 404 aa20.13■□□□□ 0.81
C6orf48-205ENST00000375640 IFI16Q16666 785 aaKnown RBP20.13■□□□□ 0.81
C6orf48-205ENST00000375640 TIGD7Q6NT04 549 aaPredicted RBP20.13■□□□□ 0.81
C6orf48-205ENST00000375640 PARGQ86W56 976 aa20.13■□□□□ 0.81
C6orf48-205ENST00000375640 VSIG1Q86XK7 387 aa20.13■□□□□ 0.81
C6orf48-205ENST00000375640 CCDC170Q8IYT3 715 aa20.13■□□□□ 0.81
C6orf48-205ENST00000375640 PQLC3Q8N755 202 aa20.13■□□□□ 0.81
C6orf48-205ENST00000375640 TP53I13Q8NBR0 393 aaPredicted RBP20.13■□□□□ 0.81
C6orf48-205ENST00000375640 RAPGEF5Q92565 580 aa20.13■□□□□ 0.81
C6orf48-205ENST00000375640 FATE1Q969F0 183 aa20.13■□□□□ 0.81
C6orf48-205ENST00000375640 NSMCE3Q96MG7 304 aa20.13■□□□□ 0.81
C6orf48-205ENST00000375640 TSGA13Q96PP4 275 aa20.13■□□□□ 0.81
C6orf48-205ENST00000375640 RNF157Q96PX1 679 aa20.13■□□□□ 0.81
C6orf48-205ENST00000375640 NOD2Q9HC29 1040 aa20.13■□□□□ 0.81
C6orf48-205ENST00000375640 SCUBE2Q9NQ36 999 aa20.13■□□□□ 0.81
C6orf48-205ENST00000375640 DNAJC28Q9NX36 388 aa20.13■□□□□ 0.81
C6orf48-205ENST00000375640 NEMP2A6NFY4 417 aa20.12■□□□□ 0.81
C6orf48-205ENST00000375640 MATN3O15232 486 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms