RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 RPL7AP62424 266 aaKnown RBP12.25□□□□□ -0.45
C9orf3-203ENST00000375315 YWHAZP63104 245 aaKnown RBP12.25□□□□□ -0.45
C9orf3-203ENST00000375315 SLC9B1Q4ZJI4 515 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 DCUN1D2Q6PH85 259 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 TAS2R42Q7RTR8 314 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 PACRGLQ8N7B6 248 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 TOP1MTQ969P6 601 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 DEFB118Q96PH6 123 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 RNF38Q9H0F5 515 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 NOL11Q9H8H0 719 aaKnown RBP12.25□□□□□ -0.45
C9orf3-203ENST00000375315 ADA2Q9NZK5 511 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 CRNNQ9UBG3 495 aaPredicted RBP12.25□□□□□ -0.45
C9orf3-203ENST00000375315 PCDHGA3Q9Y5H0 932 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 TRIP11Q15643 1979 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.24□□□□□ -0.45
C9orf3-203ENST00000375315 TMEM191CA6NGB0 347 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 B4GALT4O60513 344 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 SERPINB1P30740 379 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 SLC7A1P30825 629 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 NUMBP49757 651 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 ACLYP53396 1101 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 MRPS6P82932 125 aaKnown RBP12.24□□□□□ -0.45
C9orf3-203ENST00000375315 MAPRE1Q15691 268 aaKnown RBP12.24□□□□□ -0.45
C9orf3-203ENST00000375315 SPERTQ8NA61 448 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 DEPDC1BQ8WUY9 529 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 S100ZQ8WXG8 99 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 PBXIP1Q96AQ6 731 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 TMA16Q96EY4 203 aaKnown RBP12.24□□□□□ -0.45
C9orf3-203ENST00000375315 ADI1Q9BV57 179 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 HOXD1Q9GZZ0 328 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 TP63Q9H3D4 680 aaPredicted RBP12.24□□□□□ -0.45
C9orf3-203ENST00000375315 SMYD2Q9NRG4 433 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 DCDC2Q9UHG0 476 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 A0A1W2PQ67 120 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 F8VP50 259 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 STX16-NPEPL1H3BU86 382 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 NUAK1O60285 661 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 CKMT2P17540 419 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 TGM1P22735 817 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 ADSLP30566 484 aaPredicted RBP12.24□□□□□ -0.45
C9orf3-203ENST00000375315 ASPAP45381 313 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 NDST1P52848 882 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 TUBA1BP68363 451 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 CLDN10P78369 228 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 SOX4Q06945 474 aaPredicted RBP12.24□□□□□ -0.45
C9orf3-203ENST00000375315 TRIM25Q14258 630 aaKnown RBP12.24□□□□□ -0.45
C9orf3-203ENST00000375315 KCNJ11Q14654 390 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 HERC3Q15034 1050 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 TXNRD3NBQ6F5E7 133 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 ABRAXAS1Q6UWZ7 409 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 C4orf22Q6V702 233 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 RNF19BQ6ZMZ0 732 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 TUBA1AQ71U36 451 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 PTAR1Q7Z6K3 402 aaPredicted RBP12.24□□□□□ -0.45
C9orf3-203ENST00000375315 CAMK1DQ8IU85 385 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 RAVER1Q8IY67 606 aaKnown RBP12.24□□□□□ -0.45
C9orf3-203ENST00000375315 ANKFN1Q8N957 763 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 MFSD2AQ8NA29 543 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 ABHD11Q8NFV4 315 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 TCF12Q99081 682 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 GPN2Q9H9Y4 310 aaPredicted RBP12.24□□□□□ -0.45
C9orf3-203ENST00000375315 POPDC2Q9HBU9 364 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 HMX1Q9NP08 348 aaPredicted RBP12.24□□□□□ -0.45
C9orf3-203ENST00000375315 PCDH12Q9NPG4 1184 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 SMOXQ9NWM0 555 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 SUCOQ9UBS9 1254 aaKnown RBP12.24□□□□□ -0.45
C9orf3-203ENST00000375315 EMCNQ9ULC0 261 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 PCDHB12Q9Y5F1 795 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 SMIM28A0A1B0GU29 152 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 FKTNO75072 461 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 IL18RAPO95256 599 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 KRT3P12035 628 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 TBXAS1P24557 533 aaPredicted RBP12.24□□□□□ -0.45
C9orf3-203ENST00000375315 CRYBB1P53674 252 aaPredicted RBP12.24□□□□□ -0.45
C9orf3-203ENST00000375315 PIGHQ14442 188 aaPredicted RBP12.24□□□□□ -0.45
C9orf3-203ENST00000375315 SURF1Q15526 300 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 LDLRAP1Q5SW96 308 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 DENND1BQ6P3S1 775 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 CHSY3Q70JA7 882 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 SNX31Q8N9S9 440 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 FAM156AQ8NDB6 213 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 PNPT1Q8TCS8 783 aaKnown RBP12.24□□□□□ -0.45
C9orf3-203ENST00000375315 UHRF1Q96T88 793 aaPredicted RBP12.24□□□□□ -0.45
C9orf3-203ENST00000375315 MRPL45Q9BRJ2 306 aaKnown RBP12.24□□□□□ -0.45
C9orf3-203ENST00000375315 STARD7Q9NQZ5 370 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 COPG2Q9UBF2 871 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 PADI3Q9ULW8 664 aa12.24□□□□□ -0.45
C9orf3-203ENST00000375315 HMX2A2RU54 273 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 AREL1O15033 823 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 DEAF1O75398 565 aaPredicted RBP12.23□□□□□ -0.45
C9orf3-203ENST00000375315 TADA2AO75478 443 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 GNAO1P09471 354 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 MX2P20592 715 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 ADORA2BP29275 332 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 DPP6P42658 865 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 SCNN1GP51170 649 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 RAD23AP54725 363 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 MERTKQ12866 999 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 SLC10A2Q12908 348 aaPredicted RBP12.23□□□□□ -0.45
C9orf3-203ENST00000375315 ATAD3BQ5T9A4 648 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms