RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 NR4A3Q92570 626 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 KAZALD1Q96I82 304 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 PAK6Q9NQU5 681 aaPredicted RBP10.25□□□□□ -0.77
PTCH1-204ENST00000375290 TLR8Q9NR97 1041 aaKnown RBP10.25□□□□□ -0.77
PTCH1-204ENST00000375290 TRIM43BA6NCK2 446 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 PGRMC2O15173 223 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 ACO1P21399 889 aaKnown RBP10.25□□□□□ -0.77
PTCH1-204ENST00000375290 ZNF45Q02386 682 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 GPSM1Q86YR5 675 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 POU5F2Q8N7G0 328 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 KLHL32Q96NJ5 620 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 NODALQ96S42 347 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 ZNF624Q9P2J8 865 aaPredicted RBP10.25□□□□□ -0.77
PTCH1-204ENST00000375290 FAM170AA1A519 330 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 EML1O00423 815 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 TRUB2O95900 331 aaKnown RBP10.25□□□□□ -0.77
PTCH1-204ENST00000375290 AOC1P19801 751 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 NAGLUP54802 743 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 BMPR2Q13873 1038 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 GPR107Q5VW38 600 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 TMPRSS11AQ6ZMR5 421 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 GPR180Q86V85 440 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 KAT2BQ92831 832 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 KIFC1Q9BW19 673 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 ASTN1O14525 1302 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 POLRMTO00411 1230 aaKnown RBP10.25□□□□□ -0.77
PTCH1-204ENST00000375290 DPYSL4O14531 572 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 ZBTB14O43829 449 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 ANXA5P08758 320 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 PKNOX1P55347 436 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 AP1S2P56377 157 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 LRRC52Q8N7C0 313 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 ZNF347Q96SE7 839 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 MTMR2Q13614 643 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 TAF5Q15542 800 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 CYP2R1Q6VVX0 501 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 SETD4Q9NVD3 440 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 TMEM45AQ9NWC5 275 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 ZSCAN32Q9NX65 697 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 MYH10P35580 1976 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 SUV39H1O43463 412 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 IPO13O94829 963 aaKnown RBP10.25□□□□□ -0.77
PTCH1-204ENST00000375290 STAG3L1P0CL83 205 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 CDC42EP5Q6NZY7 148 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 ZNF438Q7Z4V0 828 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 CPSF7Q8N684 471 aaKnown RBP10.25□□□□□ -0.77
PTCH1-204ENST00000375290 ZNF655Q8N720 491 aaPredicted RBP10.25□□□□□ -0.77
PTCH1-204ENST00000375290 PARK7Q99497 189 aaKnown RBP10.25□□□□□ -0.77
PTCH1-204ENST00000375290 IDI2Q9BXS1 227 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 ALG2Q9H553 416 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 SNX15Q9NRS6 342 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 PDE10AQ9Y233 779 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 TAF6LQ9Y6J9 622 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 SPP2Q13103 211 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 GK3PQ14409 553 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 ZACNQ401N2 412 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 ACCSLQ4AC99 568 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 EIF5AL1Q6IS14 154 aaKnown RBP10.25□□□□□ -0.77
PTCH1-204ENST00000375290 ILDR2Q71H61 639 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 PRKAG2Q9UGJ0 569 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 SLC25A13Q9UJS0 675 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 DYNC1LI2O43237 492 aaPredicted RBP10.25□□□□□ -0.77
PTCH1-204ENST00000375290 CYP2A6P11509 494 aaPredicted RBP10.25□□□□□ -0.77
PTCH1-204ENST00000375290 MGAT1P26572 445 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 UGT2B15P54855 530 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 RPS7P62081 194 aaKnown RBP10.25□□□□□ -0.77
PTCH1-204ENST00000375290 ACSM2AQ08AH3 577 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 ACSM2BQ68CK6 577 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 SPAG16Q8N0X2 631 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 UNKQ9C0B0 810 aaKnown RBP10.25□□□□□ -0.77
PTCH1-204ENST00000375290 VPS4AQ9UN37 437 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 PCDHGB3Q9Y5G1 929 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 RIC1Q4ADV7 1423 aa10.25□□□□□ -0.77
PTCH1-204ENST00000375290 ABCC6O95255 1503 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 AZIN1O14977 448 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 ERFP50548 548 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 PAMR1Q6UXH9 720 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 UCMAQ8WVF2 138 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 GULP1Q9UBP9 304 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 YES1P07947 543 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 TCF7P36402 384 aaPredicted RBP10.24□□□□□ -0.77
PTCH1-204ENST00000375290 TUFMP49411 452 aaKnown RBP10.24□□□□□ -0.77
PTCH1-204ENST00000375290 ADGRE1Q14246 886 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 CRY1Q16526 586 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 C10orf62Q5T681 223 aaPredicted RBP10.24□□□□□ -0.77
PTCH1-204ENST00000375290 CNSTQ6PJW8 725 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 IL27RAQ6UWB1 636 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 GPRIN3Q6ZVF9 776 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 SLC4A11Q8NBS3 891 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 CRELD1Q96HD1 420 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 PORCNQ9H237 461 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 ZFYVE28Q9HCC9 887 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 ABCB10Q9NRK6 738 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 BRMS1LQ5PSV4 323 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 RNF220Q5VTB9 566 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 SLC27A1Q6PCB7 646 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 ARHGAP36Q6ZRI8 547 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 BANPQ8N9N5 519 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 UROC1Q96N76 676 aa10.24□□□□□ -0.77
PTCH1-204ENST00000375290 PI4K2AQ9BTU6 479 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms