RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 BRSK1Q8TDC3 778 aa18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 ERP27Q96DN0 273 aa18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 NUDCD1Q96RS6 583 aa18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 SIKE1Q9BRV8 207 aa18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 ZBED2Q9BTP6 218 aa18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 EMILIN2Q9BXX0 1053 aa18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 RASSF4Q9H2L5 321 aa18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 NOD2Q9HC29 1040 aa18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 ZNF358Q9NW07 568 aa18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 KCNK4Q9NYG8 393 aa18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 DCTN4Q9UJW0 460 aa18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 LSM7Q9UK45 103 aaKnown RBP18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 TLK1Q9UKI8 766 aa18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 OR51B4Q9Y5P0 310 aa18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 DOCK6Q96HP0 2047 aa18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 BPTFQ12830 3046 aa18.13■□□□□ 0.49
HLA-DQB1-201ENST00000374943 CBX4O00257 560 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 CPA3P15088 417 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 CA8P35219 290 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 CLCN5P51795 746 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 RAB10P61026 200 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 CYP4F8P98187 520 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 POU4F1Q01851 419 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 INO80DQ53TQ3 878 aaPredicted RBP18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 PSRC1Q6PGN9 363 aaPredicted RBP18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 HTR3DQ70Z44 454 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 SLC41A1Q8IVJ1 513 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 C10orf107Q8IVU9 208 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 MFSD6LQ8IWD5 586 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 ELMOD1Q8N336 334 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 KREMEN2Q8NCW0 462 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 PPP1R14CQ8TAE6 165 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 RAD9AQ99638 391 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 TMEM120AQ9BXJ8 343 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 NMRAL1Q9HBL8 299 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 SCUBE2Q9NQ36 999 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 A0A0G2JND7 137 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 CFAP73A6NFT4 308 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 H0Y626 953 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 DNAJC6O75061 913 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 ATP5HO75947 161 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 CD160O95971 181 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 STMN1P16949 149 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 KCNA4P22459 653 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 GMPRP36959 345 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 TMEM240Q5SV17 173 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 RAPH1Q70E73 1250 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 CILP2Q8IUL8 1156 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 HS6ST3Q8IZP7 471 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 CARNMT1Q8N4J0 409 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 BADQ92934 168 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 TMA16Q96EY4 203 aaKnown RBP18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 TSNARE1Q96NA8 513 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 GCNAQ96QF7 691 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 TDRD1Q9BXT4 1180 aaKnown RBP18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 ECT2Q9H8V3 914 aa18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 CXXC1Q9P0U4 656 aaPredicted RBP18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 DNMT3BQ9UBC3 853 aaKnown RBP18.12■□□□□ 0.49
HLA-DQB1-201ENST00000374943 TRAV19A0A0A6YYK7 116 aa18.11■□□□□ 0.49
HLA-DQB1-201ENST00000374943 G3V2L1 256 aa18.11■□□□□ 0.49
HLA-DQB1-201ENST00000374943 H0YHG0 523 aa18.11■□□□□ 0.49
HLA-DQB1-201ENST00000374943 H2AFYO75367 372 aaKnown RBP18.11■□□□□ 0.49
HLA-DQB1-201ENST00000374943 HAUS5O94927 633 aa18.11■□□□□ 0.49
HLA-DQB1-201ENST00000374943 GLUD1P00367 558 aa18.11■□□□□ 0.49
HLA-DQB1-201ENST00000374943 CKMP06732 381 aa18.11■□□□□ 0.49
HLA-DQB1-201ENST00000374943 PSMA3P25788 255 aa18.11■□□□□ 0.49
HLA-DQB1-201ENST00000374943 ARSDP51689 593 aa18.11■□□□□ 0.49
HLA-DQB1-201ENST00000374943 GALNT3Q14435 633 aa18.11■□□□□ 0.49
HLA-DQB1-201ENST00000374943 FSCBQ5H9T9 825 aa18.11■□□□□ 0.49
HLA-DQB1-201ENST00000374943 RALGPS1Q5JS13 557 aa18.11■□□□□ 0.49
HLA-DQB1-201ENST00000374943 MPP7Q5T2T1 576 aa18.11■□□□□ 0.49
HLA-DQB1-201ENST00000374943 ZCCHC23Q6ZST2 131 aa18.11■□□□□ 0.49
HLA-DQB1-201ENST00000374943 RTL10Q7L3V2 364 aa18.11■□□□□ 0.49
HLA-DQB1-201ENST00000374943 DCAF4L2Q8NA75 395 aa18.11■□□□□ 0.49
HLA-DQB1-201ENST00000374943 GPR150Q8NGU9 434 aa18.11■□□□□ 0.49
HLA-DQB1-201ENST00000374943 STYXQ8WUJ0 223 aa18.11■□□□□ 0.49
HLA-DQB1-201ENST00000374943 SKA1Q96BD8 255 aa18.11■□□□□ 0.49
HLA-DQB1-201ENST00000374943 ALG14Q96F25 216 aa18.11■□□□□ 0.49
HLA-DQB1-201ENST00000374943 NSMCE3Q96MG7 304 aa18.11■□□□□ 0.49
HLA-DQB1-201ENST00000374943 TCF25Q9BQ70 676 aa18.11■□□□□ 0.49
HLA-DQB1-201ENST00000374943 FEM1AQ9BSK4 669 aa18.11■□□□□ 0.49
HLA-DQB1-201ENST00000374943 C20orf27Q9GZN8 174 aa18.11■□□□□ 0.49
HLA-DQB1-201ENST00000374943 TXLNGQ9NUQ3 528 aa18.11■□□□□ 0.49
HLA-DQB1-201ENST00000374943 PRKAG2Q9UGJ0 569 aa18.11■□□□□ 0.49
HLA-DQB1-201ENST00000374943 ACOT9Q9Y305 439 aa18.11■□□□□ 0.49
HLA-DQB1-201ENST00000374943 NOTCH4Q99466 2003 aa18.1■□□□□ 0.49
HLA-DQB1-201ENST00000374943 A0A087X1B8 175 aa18.1■□□□□ 0.49
HLA-DQB1-201ENST00000374943 E2F8A0AVK6 867 aa18.1■□□□□ 0.49
HLA-DQB1-201ENST00000374943 PHGDHO43175 533 aaKnown RBP18.1■□□□□ 0.49
HLA-DQB1-201ENST00000374943 RPP40O75818 363 aaKnown RBP18.1■□□□□ 0.49
HLA-DQB1-201ENST00000374943 TMCC1O94876 653 aa18.1■□□□□ 0.49
HLA-DQB1-201ENST00000374943 UNC5CO95185 931 aa18.1■□□□□ 0.49
HLA-DQB1-201ENST00000374943 ATP5BP06576 529 aaKnown RBP18.1■□□□□ 0.49
HLA-DQB1-201ENST00000374943 RALBP11234 206 aa18.1■□□□□ 0.49
HLA-DQB1-201ENST00000374943 MZF1P28698 734 aaPredicted RBP18.1■□□□□ 0.49
HLA-DQB1-201ENST00000374943 SLC1A6P48664 564 aa18.1■□□□□ 0.49
HLA-DQB1-201ENST00000374943 NUMBP49757 651 aa18.1■□□□□ 0.49
HLA-DQB1-201ENST00000374943 SCNN1BP51168 640 aa18.1■□□□□ 0.49
HLA-DQB1-201ENST00000374943 PRAMEP78395 509 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms