RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 IL37Q9NZH6 218 aa15.71■□□□□ 0.11
CCDC40-202ENST00000374876 COPG2Q9UBF2 871 aa15.71■□□□□ 0.11
CCDC40-202ENST00000374876 NKX1-2Q9UD57 310 aaPredicted RBP15.71■□□□□ 0.11
CCDC40-202ENST00000374876 MYO10Q9HD67 2058 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 E2F8A0AVK6 867 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 C19orf67A6NJJ6 358 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 IRAK2O43187 625 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 ITM2AO43736 263 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 ENTPD5O75356 428 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 FGF19O95750 216 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 MAGEA12P43365 314 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 ALDH18A1P54886 795 aaKnown RBP15.7■□□□□ 0.1
CCDC40-202ENST00000374876 BRMS1LQ5PSV4 323 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 GJD3Q8N144 294 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 ISL2Q96A47 359 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 AZIN2Q96A70 460 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 RSRC1Q96IZ7 334 aaKnown RBP15.7■□□□□ 0.1
CCDC40-202ENST00000374876 GCNAQ96QF7 691 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 HAPLN3Q96S86 360 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 SLC46A2Q9BY10 475 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 SOX13Q9UN79 622 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 AAR2Q9Y312 384 aaKnown RBP15.7■□□□□ 0.1
CCDC40-202ENST00000374876 MUC3AQ02505 3323 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 C2orf78A6NCI8 922 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 TIMM44O43615 452 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 LMNAP02545 664 aaKnown RBP15.7■□□□□ 0.1
CCDC40-202ENST00000374876 PRKCGP05129 697 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 MPOP05164 745 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 ASGR2P07307 311 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 SERPINA6P08185 405 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 CPA3P15088 417 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 CCNCP24863 283 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 CCR1P32246 355 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 MPP3Q13368 585 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 RCN2Q14257 317 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 TBCCQ15814 346 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 RFWD3Q6PCD5 774 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 PARM1Q6UWI2 310 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 TREML1Q86YW5 311 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 ARHGAP24Q8N264 748 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 CNTD1Q8N815 330 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 TTC8Q8TAM2 541 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 ZSCAN18Q8TBC5 510 aaPredicted RBP15.7■□□□□ 0.1
CCDC40-202ENST00000374876 TSGA13Q96PP4 275 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 EBF4Q9BQW3 602 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 RPP25Q9BUL9 199 aaKnown RBP15.7■□□□□ 0.1
CCDC40-202ENST00000374876 SMG9Q9H0W8 520 aaKnown RBP15.7■□□□□ 0.1
CCDC40-202ENST00000374876 CATSPERBQ9H7T0 1116 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 TRPC7Q9HCX4 862 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 IARS2Q9NSE4 1012 aaKnown RBP15.7■□□□□ 0.1
CCDC40-202ENST00000374876 GDE1Q9NZC3 331 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 TRPM5Q9NZQ8 1165 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 GMIPQ9P107 970 aa15.7■□□□□ 0.1
CCDC40-202ENST00000374876 ZNF840PA6NDX5 716 aa15.69■□□□□ 0.1
CCDC40-202ENST00000374876 B2RBV5 119 aa15.69■□□□□ 0.1
CCDC40-202ENST00000374876 FGF10O15520 208 aaPredicted RBP15.69■□□□□ 0.1
CCDC40-202ENST00000374876 PAGE1O75459 146 aa15.69■□□□□ 0.1
CCDC40-202ENST00000374876 RALBP11234 206 aa15.69■□□□□ 0.1
CCDC40-202ENST00000374876 CPA2P48052 419 aa15.69■□□□□ 0.1
CCDC40-202ENST00000374876 CSE1LP55060 971 aaKnown RBP15.69■□□□□ 0.1
CCDC40-202ENST00000374876 EIF4EBP2Q13542 120 aaPredicted RBP15.69■□□□□ 0.1
CCDC40-202ENST00000374876 ARHGAP15Q53QZ3 475 aa15.69■□□□□ 0.1
CCDC40-202ENST00000374876 FAM78AQ5JUQ0 283 aa15.69■□□□□ 0.1
CCDC40-202ENST00000374876 ARHGAP36Q6ZRI8 547 aa15.69■□□□□ 0.1
CCDC40-202ENST00000374876 PLCD3Q8N3E9 789 aa15.69■□□□□ 0.1
CCDC40-202ENST00000374876 ENDOVQ8N8Q3 282 aaKnown RBP15.69■□□□□ 0.1
CCDC40-202ENST00000374876 MRPS31Q92665 395 aaKnown RBP15.69■□□□□ 0.1
CCDC40-202ENST00000374876 FGF14Q92915 247 aa15.69■□□□□ 0.1
CCDC40-202ENST00000374876 SLC22A12Q96S37 553 aa15.69■□□□□ 0.1
CCDC40-202ENST00000374876 MMADHCQ9H3L0 296 aaPredicted RBP15.69■□□□□ 0.1
CCDC40-202ENST00000374876 SMOC2Q9H3U7 446 aa15.69■□□□□ 0.1
CCDC40-202ENST00000374876 FBXO44Q9H4M3 255 aa15.69■□□□□ 0.1
CCDC40-202ENST00000374876 STN1Q9H668 368 aaKnown RBP15.69■□□□□ 0.1
CCDC40-202ENST00000374876 ZNF358Q9NW07 568 aa15.69■□□□□ 0.1
CCDC40-202ENST00000374876 EPS15L1Q9UBC2 864 aa15.69■□□□□ 0.1
CCDC40-202ENST00000374876 SFMBT1Q9UHJ3 866 aa15.69■□□□□ 0.1
CCDC40-202ENST00000374876 TAGLN3Q9UI15 199 aa15.69■□□□□ 0.1
CCDC40-202ENST00000374876 A0A096LPK6 155 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 FAM92AA1XBS5 289 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 H0Y3Z8 333 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 MSI1O43347 362 aaKnown RBP15.68■□□□□ 0.1
CCDC40-202ENST00000374876 F7P08709 466 aaPredicted RBP15.68■□□□□ 0.1
CCDC40-202ENST00000374876 TPBGLP0DKB5 382 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 NMBRP28336 390 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 HTR7P34969 479 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 GMPRP36959 345 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 TLDC1Q6P9B6 456 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 TMPRSS6Q8IU80 811 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 LZTR1Q8N653 840 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 KCNV2Q8TDN2 545 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 ZNF778Q96MU6 729 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 FAM96AQ9H5X1 160 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 TASP1Q9H6P5 420 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 DCLRE1BQ9H816 532 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 CAB39LQ9H9S4 337 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 KCNK12Q9HB15 430 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 NEU3Q9UQ49 428 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 DENND4CQ5VZ89 1909 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 SPECC1L-ADORA2AF8WAN1 911 aa15.68■□□□□ 0.1
CCDC40-202ENST00000374876 ANXA9O76027 345 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms