RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 SERPINF2P08697 491 aa17.7■□□□□ 0.42
PFDN6-201ENST00000374606 DRD1P21728 446 aa17.7■□□□□ 0.42
PFDN6-201ENST00000374606 MAPK8P45983 427 aa17.7■□□□□ 0.42
PFDN6-201ENST00000374606 CXCL12P48061 93 aa17.7■□□□□ 0.42
PFDN6-201ENST00000374606 CDK16Q00536 496 aa17.7■□□□□ 0.42
PFDN6-201ENST00000374606 GRSF1Q12849 480 aaKnown RBP eCLIP17.7■□□□□ 0.42
PFDN6-201ENST00000374606 ZNF234Q14588 700 aa17.7■□□□□ 0.42
PFDN6-201ENST00000374606 SLC14A2Q15849 920 aa17.7■□□□□ 0.42
PFDN6-201ENST00000374606 TMEM196Q5HYL7 178 aa17.7■□□□□ 0.42
PFDN6-201ENST00000374606 DGKKQ5KSL6 1271 aa17.7■□□□□ 0.42
PFDN6-201ENST00000374606 SERPINA13PQ6UXR4 307 aa17.7■□□□□ 0.42
PFDN6-201ENST00000374606 PPP1R21Q6ZMI0 780 aa17.7■□□□□ 0.42
PFDN6-201ENST00000374606 Q6ZVU0 165 aa17.7■□□□□ 0.42
PFDN6-201ENST00000374606 SRLQ86TD4 932 aa17.7■□□□□ 0.42
PFDN6-201ENST00000374606 PRPF39Q86UA1 669 aaKnown RBP17.7■□□□□ 0.42
PFDN6-201ENST00000374606 KLHDC8BQ8IXV7 354 aa17.7■□□□□ 0.42
PFDN6-201ENST00000374606 IPMKQ8NFU5 416 aa17.7■□□□□ 0.42
PFDN6-201ENST00000374606 FBXO25Q8TCJ0 367 aa17.7■□□□□ 0.42
PFDN6-201ENST00000374606 FSD1LQ9BXM9 530 aa17.7■□□□□ 0.42
PFDN6-201ENST00000374606 NOD2Q9HC29 1040 aa17.7■□□□□ 0.42
PFDN6-201ENST00000374606 FBRSL1Q9HCM7 1045 aaKnown RBP17.7■□□□□ 0.42
PFDN6-201ENST00000374606 THAP10Q9P2Z0 257 aaPredicted RBP17.7■□□□□ 0.42
PFDN6-201ENST00000374606 RAB21Q9UL25 225 aa17.7■□□□□ 0.42
PFDN6-201ENST00000374606 NFU1Q9UMS0 254 aa17.7■□□□□ 0.42
PFDN6-201ENST00000374606 TCRBV7S3A2A0A539 114 aa17.69■□□□□ 0.42
PFDN6-201ENST00000374606 GOLGA8MH3BSY2 632 aa17.69■□□□□ 0.42
PFDN6-201ENST00000374606 ZNF821O75541 412 aaPredicted RBP17.69■□□□□ 0.42
PFDN6-201ENST00000374606 MMP2P08253 660 aa17.69■□□□□ 0.42
PFDN6-201ENST00000374606 ECHS1P30084 290 aa17.69■□□□□ 0.42
PFDN6-201ENST00000374606 TNNT3P45378 269 aaPredicted RBP17.69■□□□□ 0.42
PFDN6-201ENST00000374606 CSNK1DP48730 415 aa17.69■□□□□ 0.42
PFDN6-201ENST00000374606 SARNPP82979 210 aaKnown RBP17.69■□□□□ 0.42
PFDN6-201ENST00000374606 SKOR1P84550 965 aa17.69■□□□□ 0.42
PFDN6-201ENST00000374606 SATB1Q01826 763 aa17.69■□□□□ 0.42
PFDN6-201ENST00000374606 PCSK7Q16549 785 aa17.69■□□□□ 0.42
PFDN6-201ENST00000374606 CARD16Q5EG05 197 aa17.69■□□□□ 0.42
PFDN6-201ENST00000374606 EGFLAMQ63HQ2 1017 aa17.69■□□□□ 0.42
PFDN6-201ENST00000374606 KCTD11Q693B1 232 aa17.69■□□□□ 0.42
PFDN6-201ENST00000374606 NAPEPLDQ6IQ20 393 aa17.69■□□□□ 0.42
PFDN6-201ENST00000374606 FSTL4Q6MZW2 842 aa17.69■□□□□ 0.42
PFDN6-201ENST00000374606 GSPT2Q8IYD1 628 aaKnown RBP17.69■□□□□ 0.42
PFDN6-201ENST00000374606 ZNF513Q8N8E2 541 aaPredicted RBP17.69■□□□□ 0.42
PFDN6-201ENST00000374606 FRS2Q8WU20 508 aa17.69■□□□□ 0.42
PFDN6-201ENST00000374606 FICDQ9BVA6 458 aa17.69■□□□□ 0.42
PFDN6-201ENST00000374606 NEUROG2Q9H2A3 272 aa17.69■□□□□ 0.42
PFDN6-201ENST00000374606 ZDHHC18Q9NUE0 388 aa17.69■□□□□ 0.42
PFDN6-201ENST00000374606 EVLQ9UI08 416 aaPredicted RBP17.69■□□□□ 0.42
PFDN6-201ENST00000374606 STARD13Q9Y3M8 1113 aa17.69■□□□□ 0.42
PFDN6-201ENST00000374606 CFAP47Q6ZTR5 3102 aa17.68■□□□□ 0.42
PFDN6-201ENST00000374606 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.68■□□□□ 0.42
PFDN6-201ENST00000374606 K7EQS6 105 aa17.68■□□□□ 0.42
PFDN6-201ENST00000374606 NPC1O15118 1278 aa17.68■□□□□ 0.42
PFDN6-201ENST00000374606 TP73O15350 636 aa17.68■□□□□ 0.42
PFDN6-201ENST00000374606 EGFP01133 1207 aa17.68■□□□□ 0.42
PFDN6-201ENST00000374606 HNRNPLP14866 589 aaKnown RBP eCLIP17.68■□□□□ 0.42
PFDN6-201ENST00000374606 KCNA4P22459 653 aa17.68■□□□□ 0.42
PFDN6-201ENST00000374606 CA4P22748 312 aa17.68■□□□□ 0.42
PFDN6-201ENST00000374606 CNR2P34972 360 aa17.68■□□□□ 0.42
PFDN6-201ENST00000374606 CCNHP51946 323 aaPredicted RBP17.68■□□□□ 0.42
PFDN6-201ENST00000374606 SEC13P55735 322 aa17.68■□□□□ 0.42
PFDN6-201ENST00000374606 WNT3AP56704 352 aa17.68■□□□□ 0.42
PFDN6-201ENST00000374606 SPARCL1Q14515 664 aa17.68■□□□□ 0.42
PFDN6-201ENST00000374606 NCEH1Q6PIU2 408 aa17.68■□□□□ 0.42
PFDN6-201ENST00000374606 KDELC1Q6UW63 502 aa17.68■□□□□ 0.42
PFDN6-201ENST00000374606 CCNI2Q6ZMN8 369 aaPredicted RBP17.68■□□□□ 0.42
PFDN6-201ENST00000374606 LINC00523Q86TU6 105 aa17.68■□□□□ 0.42
PFDN6-201ENST00000374606 ZCCHC9Q8N567 271 aaKnown RBP17.68■□□□□ 0.42
PFDN6-201ENST00000374606 MCUQ8NE86 351 aa17.68■□□□□ 0.42
PFDN6-201ENST00000374606 OR6K2Q8NGY2 324 aa17.68■□□□□ 0.42
PFDN6-201ENST00000374606 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.68■□□□□ 0.42
PFDN6-201ENST00000374606 EZH1Q92800 747 aaPredicted RBP17.68■□□□□ 0.42
PFDN6-201ENST00000374606 TADA1Q96BN2 335 aa17.68■□□□□ 0.42
PFDN6-201ENST00000374606 FMO2Q99518 471 aa17.68■□□□□ 0.42
PFDN6-201ENST00000374606 TBL1YQ9BQ87 522 aa17.68■□□□□ 0.42
PFDN6-201ENST00000374606 FRMD8Q9BZ67 464 aaPredicted RBP17.68■□□□□ 0.42
PFDN6-201ENST00000374606 TMEM245Q9H330 911 aa17.68■□□□□ 0.42
PFDN6-201ENST00000374606 ANKRD36A6QL64 1941 aa17.68■□□□□ 0.42
PFDN6-201ENST00000374606 EDDM13A0A1B0GTR0 161 aa17.67■□□□□ 0.42
PFDN6-201ENST00000374606 CHURC1-FNTBB4DL54 471 aa17.67■□□□□ 0.42
PFDN6-201ENST00000374606 SUN1O94901 812 aa17.67■□□□□ 0.42
PFDN6-201ENST00000374606 MYBL2P10244 700 aa17.67■□□□□ 0.42
PFDN6-201ENST00000374606 CHRNB1P11230 501 aa17.67■□□□□ 0.42
PFDN6-201ENST00000374606 IL12RB1P42701 662 aa17.67■□□□□ 0.42
PFDN6-201ENST00000374606 FNTBP49356 437 aa17.67■□□□□ 0.42
PFDN6-201ENST00000374606 RAD51Q06609 339 aa17.67■□□□□ 0.42
PFDN6-201ENST00000374606 LRRC32Q14392 662 aa17.67■□□□□ 0.42
PFDN6-201ENST00000374606 HIF1AQ16665 826 aa17.67■□□□□ 0.42
PFDN6-201ENST00000374606 HNRNPA1L2Q32P51 320 aaKnown RBP17.67■□□□□ 0.42
PFDN6-201ENST00000374606 DPY19L3Q6ZPD9 716 aa17.67■□□□□ 0.42
PFDN6-201ENST00000374606 PLPP6Q8IY26 295 aa17.67■□□□□ 0.42
PFDN6-201ENST00000374606 CHPFQ8IZ52 775 aa17.67■□□□□ 0.42
PFDN6-201ENST00000374606 SPEM1Q8N4L4 309 aa17.67■□□□□ 0.42
PFDN6-201ENST00000374606 ZNF366Q8N895 744 aa17.67■□□□□ 0.42
PFDN6-201ENST00000374606 OR2A12Q8NGT7 310 aa17.67■□□□□ 0.42
PFDN6-201ENST00000374606 IFT43Q96FT9 208 aa17.67■□□□□ 0.42
PFDN6-201ENST00000374606 MRGPRX2Q96LB1 330 aa17.67■□□□□ 0.42
PFDN6-201ENST00000374606 SERPINB12Q96P63 405 aa17.67■□□□□ 0.42
PFDN6-201ENST00000374606 TUBGCP5Q96RT8 1024 aa17.67■□□□□ 0.42
PFDN6-201ENST00000374606 FOXP3Q9BZS1 431 aa17.67■□□□□ 0.42
PFDN6-201ENST00000374606 ZDHHC6Q9H6R6 413 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms