RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 OR52E8Q6IFG1 317 aa14.06□□□□□ -0.16
HMGCL-203ENST00000374490 NEPROQ6NW34 567 aa14.06□□□□□ -0.16
HMGCL-203ENST00000374490 KDELC1Q6UW63 502 aa14.06□□□□□ -0.16
HMGCL-203ENST00000374490 SDCCAG8Q86SQ7 713 aaPredicted RBP14.06□□□□□ -0.16
HMGCL-203ENST00000374490 LRRTM3Q86VH5 581 aa14.06□□□□□ -0.16
HMGCL-203ENST00000374490 PGAM4Q8N0Y7 254 aa14.06□□□□□ -0.16
HMGCL-203ENST00000374490 UMODL1-AS1Q8N2C9 162 aa14.06□□□□□ -0.16
HMGCL-203ENST00000374490 CATSPER1Q8NEC5 780 aa14.06□□□□□ -0.16
HMGCL-203ENST00000374490 PYDC1Q8WXC3 89 aa14.06□□□□□ -0.16
HMGCL-203ENST00000374490 NXNL1Q96CM4 212 aa14.06□□□□□ -0.16
HMGCL-203ENST00000374490 MRGPRX2Q96LB1 330 aa14.06□□□□□ -0.16
HMGCL-203ENST00000374490 EML4Q9HC35 981 aaKnown RBP14.06□□□□□ -0.16
HMGCL-203ENST00000374490 MAN1C1Q9NR34 630 aa14.06□□□□□ -0.16
HMGCL-203ENST00000374490 TLR6Q9Y2C9 796 aa14.06□□□□□ -0.16
HMGCL-203ENST00000374490 ASB3Q9Y575 518 aa14.06□□□□□ -0.16
HMGCL-203ENST00000374490 PATJQ8NI35 1801 aa14.06□□□□□ -0.16
HMGCL-203ENST00000374490 COL6A3P12111 3177 aa14.05□□□□□ -0.16
HMGCL-203ENST00000374490 TRIM43BA6NCK2 446 aa14.05□□□□□ -0.16
HMGCL-203ENST00000374490 RBP1P09455 135 aa14.05□□□□□ -0.16
HMGCL-203ENST00000374490 CLTBP09497 229 aa14.05□□□□□ -0.16
HMGCL-203ENST00000374490 CPB1P15086 417 aa14.05□□□□□ -0.16
HMGCL-203ENST00000374490 RHOQP17081 205 aa14.05□□□□□ -0.16
HMGCL-203ENST00000374490 ARNTP27540 789 aa14.05□□□□□ -0.16
HMGCL-203ENST00000374490 AVPR1AP37288 418 aa14.05□□□□□ -0.16
HMGCL-203ENST00000374490 NUDT2P50583 147 aa14.05□□□□□ -0.16
HMGCL-203ENST00000374490 PAPOLAP51003 745 aaKnown RBP14.05□□□□□ -0.16
HMGCL-203ENST00000374490 CLCN2P51788 898 aa14.05□□□□□ -0.16
HMGCL-203ENST00000374490 MLLT6P55198 1093 aaPredicted RBP14.05□□□□□ -0.16
HMGCL-203ENST00000374490 WNT3AP56704 352 aa14.05□□□□□ -0.16
HMGCL-203ENST00000374490 SMAD3P84022 425 aaKnown RBP14.05□□□□□ -0.16
HMGCL-203ENST00000374490 YWHAHQ04917 246 aaPredicted RBP14.05□□□□□ -0.16
HMGCL-203ENST00000374490 TNK2Q07912 1038 aa14.05□□□□□ -0.16
HMGCL-203ENST00000374490 CTBP1Q13363 440 aa14.05□□□□□ -0.16
HMGCL-203ENST00000374490 BFSP2Q13515 415 aa14.05□□□□□ -0.16
HMGCL-203ENST00000374490 LAMB3Q13751 1172 aa14.05□□□□□ -0.16
HMGCL-203ENST00000374490 SEPT6Q14141 434 aa14.05□□□□□ -0.16
HMGCL-203ENST00000374490 FAM83EQ2M2I3 478 aa14.05□□□□□ -0.16
HMGCL-203ENST00000374490 SCD5Q86SK9 330 aa14.05□□□□□ -0.16
HMGCL-203ENST00000374490 KBTBD6Q86V97 674 aa14.05□□□□□ -0.16
HMGCL-203ENST00000374490 HPS6Q86YV9 775 aa14.05□□□□□ -0.16
HMGCL-203ENST00000374490 DENND6AQ8IWF6 608 aa14.05□□□□□ -0.16
HMGCL-203ENST00000374490 LSMEM2Q8N112 164 aa14.05□□□□□ -0.16
HMGCL-203ENST00000374490 SCAMP5Q8TAC9 235 aa14.05□□□□□ -0.16
HMGCL-203ENST00000374490 GDPD5Q8WTR4 605 aa14.05□□□□□ -0.16
HMGCL-203ENST00000374490 DLG3Q92796 817 aa14.05□□□□□ -0.16
HMGCL-203ENST00000374490 CASP10Q92851 521 aa14.05□□□□□ -0.16
HMGCL-203ENST00000374490 TRIM43Q96BQ3 446 aaPredicted RBP14.05□□□□□ -0.16
HMGCL-203ENST00000374490 CCDC124Q96CT7 223 aaKnown RBP14.05□□□□□ -0.16
HMGCL-203ENST00000374490 FUBP3Q96I24 572 aaKnown RBP eCLIP14.05□□□□□ -0.16
HMGCL-203ENST00000374490 MAELQ96JY0 434 aaKnown RBP14.05□□□□□ -0.16
HMGCL-203ENST00000374490 BTBD9Q96Q07 612 aa14.05□□□□□ -0.16
HMGCL-203ENST00000374490 SHCBP1LQ9BZQ2 653 aa14.05□□□□□ -0.16
HMGCL-203ENST00000374490 FBXO44Q9H4M3 255 aa14.05□□□□□ -0.16
HMGCL-203ENST00000374490 WDR55Q9H6Y2 383 aaPredicted RBP14.05□□□□□ -0.16
HMGCL-203ENST00000374490 EFCAB1Q9HAE3 211 aa14.05□□□□□ -0.16
HMGCL-203ENST00000374490 PSMD13Q9UNM6 376 aa14.05□□□□□ -0.16
HMGCL-203ENST00000374490 SCML2Q9UQR0 700 aa14.05□□□□□ -0.16
HMGCL-203ENST00000374490 HS3ST4Q9Y661 456 aa14.05□□□□□ -0.16
HMGCL-203ENST00000374490 TDRD15B5MCY1 1934 aaKnown RBP14.05□□□□□ -0.16
HMGCL-203ENST00000374490 MYO18AQ92614 2054 aaKnown RBP14.05□□□□□ -0.16
HMGCL-203ENST00000374490 ZNF638Q14966 1978 aaKnown RBP14.05□□□□□ -0.16
HMGCL-203ENST00000374490 CCDC78A2IDD5 438 aa14.04□□□□□ -0.16
HMGCL-203ENST00000374490 NEMP1O14524 444 aa14.04□□□□□ -0.16
HMGCL-203ENST00000374490 PMPCBO75439 489 aa14.04□□□□□ -0.16
HMGCL-203ENST00000374490 SKAP2O75563 359 aaPredicted RBP14.04□□□□□ -0.16
HMGCL-203ENST00000374490 LYNP07948 512 aa14.04□□□□□ -0.16
HMGCL-203ENST00000374490 F7P08709 466 aaPredicted RBP14.04□□□□□ -0.16
HMGCL-203ENST00000374490 PIM1P11309 404 aaPredicted RBP14.04□□□□□ -0.16
HMGCL-203ENST00000374490 RAG1P15918 1043 aa14.04□□□□□ -0.16
HMGCL-203ENST00000374490 HOXB8P17481 243 aaPredicted RBP14.04□□□□□ -0.16
HMGCL-203ENST00000374490 SLC26A3P40879 764 aa14.04□□□□□ -0.16
HMGCL-203ENST00000374490 GLRBP48167 497 aa14.04□□□□□ -0.16
HMGCL-203ENST00000374490 LEPRP48357 1165 aaKnown RBP14.04□□□□□ -0.16
HMGCL-203ENST00000374490 SERPINH1P50454 418 aaKnown RBP14.04□□□□□ -0.16
HMGCL-203ENST00000374490 TAS2R39P59534 338 aa14.04□□□□□ -0.16
HMGCL-203ENST00000374490 PFKPQ01813 784 aa14.04□□□□□ -0.16
HMGCL-203ENST00000374490 SLC14A2Q15849 920 aa14.04□□□□□ -0.16
HMGCL-203ENST00000374490 CNGA3Q16281 694 aa14.04□□□□□ -0.16
HMGCL-203ENST00000374490 TSTD2Q5T7W7 516 aa14.04□□□□□ -0.16
HMGCL-203ENST00000374490 LRRC8DQ7L1W4 858 aa14.04□□□□□ -0.16
HMGCL-203ENST00000374490 MON1AQ86VX9 555 aa14.04□□□□□ -0.16
HMGCL-203ENST00000374490 SLC22A9Q8IVM8 553 aa14.04□□□□□ -0.16
HMGCL-203ENST00000374490 DSELQ8IZU8 1212 aa14.04□□□□□ -0.16
HMGCL-203ENST00000374490 CCNYL1Q8N7R7 359 aa14.04□□□□□ -0.16
HMGCL-203ENST00000374490 KDM1BQ8NB78 822 aa14.04□□□□□ -0.16
HMGCL-203ENST00000374490 CEP70Q8NHQ1 597 aa14.04□□□□□ -0.16
HMGCL-203ENST00000374490 AGR3Q8TD06 166 aa14.04□□□□□ -0.16
HMGCL-203ENST00000374490 IFT43Q96FT9 208 aa14.04□□□□□ -0.16
HMGCL-203ENST00000374490 IMP4Q96G21 291 aaKnown RBP14.04□□□□□ -0.16
HMGCL-203ENST00000374490 C8orf48Q96LL4 319 aa14.04□□□□□ -0.16
HMGCL-203ENST00000374490 TMEM209Q96SK2 561 aa14.04□□□□□ -0.16
HMGCL-203ENST00000374490 CDX2Q99626 313 aaPredicted RBP14.04□□□□□ -0.16
HMGCL-203ENST00000374490 NUF2Q9BZD4 464 aa14.04□□□□□ -0.16
HMGCL-203ENST00000374490 ZBTB26Q9HCK0 441 aa14.04□□□□□ -0.16
HMGCL-203ENST00000374490 ATP13A1Q9HD20 1204 aa14.04□□□□□ -0.16
HMGCL-203ENST00000374490 UTP6Q9NYH9 597 aaKnown RBP14.04□□□□□ -0.16
HMGCL-203ENST00000374490 SFMBT1Q9UHJ3 866 aa14.04□□□□□ -0.16
HMGCL-203ENST00000374490 ZDHHC2Q9UIJ5 367 aa14.04□□□□□ -0.16
HMGCL-203ENST00000374490 EIF4E1BA6NMX2 242 aaKnown RBP14.04□□□□□ -0.16
HMGCL-203ENST00000374490 AIM2O14862 343 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms