RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 SUV39H2Q9H5I1 410 aa18.7■□□□□ 0.58
CDX4-201ENST00000373514 AMACRQ9UHK6 382 aa18.7■□□□□ 0.58
CDX4-201ENST00000373514 DMDP11532 3685 aa18.7■□□□□ 0.58
CDX4-201ENST00000373514 SDK1Q7Z5N4 2213 aa18.7■□□□□ 0.58
CDX4-201ENST00000373514 ATXN2Q99700 1313 aaKnown RBP18.7■□□□□ 0.58
CDX4-201ENST00000373514 TRAFD1O14545 582 aaPredicted RBP18.69■□□□□ 0.58
CDX4-201ENST00000373514 MAP3K13O43283 966 aa18.69■□□□□ 0.58
CDX4-201ENST00000373514 PLRG1O43660 514 aaKnown RBP18.69■□□□□ 0.58
CDX4-201ENST00000373514 PHF2O75151 1096 aa18.69■□□□□ 0.58
CDX4-201ENST00000373514 NDUFS2O75306 463 aa18.69■□□□□ 0.58
CDX4-201ENST00000373514 SEMA4FO95754 770 aa18.69■□□□□ 0.58
CDX4-201ENST00000373514 ITIH2P19823 946 aa18.69■□□□□ 0.58
CDX4-201ENST00000373514 CD86P42081 329 aa18.69■□□□□ 0.58
CDX4-201ENST00000373514 PPP2CBP62714 309 aa18.69■□□□□ 0.58
CDX4-201ENST00000373514 PPP2CAP67775 309 aa18.69■□□□□ 0.58
CDX4-201ENST00000373514 BCL2L1Q07817 233 aa18.69■□□□□ 0.58
CDX4-201ENST00000373514 BYSLQ13895 437 aaKnown RBP18.69■□□□□ 0.58
CDX4-201ENST00000373514 TEX44Q53QW1 395 aa18.69■□□□□ 0.58
CDX4-201ENST00000373514 CCDC70Q6NSX1 233 aa18.69■□□□□ 0.58
CDX4-201ENST00000373514 C8orf74Q6P047 294 aa18.69■□□□□ 0.58
CDX4-201ENST00000373514 PDCD6IPQ8WUM4 868 aaKnown RBP18.69■□□□□ 0.58
CDX4-201ENST00000373514 TEKT5Q96M29 485 aa18.69■□□□□ 0.58
CDX4-201ENST00000373514 RBM15Q96T37 977 aaKnown RBP eCLIP18.69■□□□□ 0.58
CDX4-201ENST00000373514 TMEM121Q9BTD3 319 aa18.69■□□□□ 0.58
CDX4-201ENST00000373514 HDAC8Q9BY41 377 aa18.69■□□□□ 0.58
CDX4-201ENST00000373514 ANKZF1Q9H8Y5 726 aa18.69■□□□□ 0.58
CDX4-201ENST00000373514 USP29Q9HBJ7 922 aa18.69■□□□□ 0.58
CDX4-201ENST00000373514 KLHL8Q9P2G9 620 aaPredicted RBP18.69■□□□□ 0.58
CDX4-201ENST00000373514 SMG5Q9UPR3 1016 aaKnown RBP18.69■□□□□ 0.58
CDX4-201ENST00000373514 TRPM6Q9BX84 2022 aa18.69■□□□□ 0.58
CDX4-201ENST00000373514 TSPAN11A1L157 253 aa18.69■□□□□ 0.58
CDX4-201ENST00000373514 BCLAF3A2AJT9 711 aaKnown RBP18.69■□□□□ 0.58
CDX4-201ENST00000373514 OXTRP30559 389 aa18.69■□□□□ 0.58
CDX4-201ENST00000373514 PTGER3P43115 390 aa18.69■□□□□ 0.58
CDX4-201ENST00000373514 MAPK8P45983 427 aa18.69■□□□□ 0.58
CDX4-201ENST00000373514 MRPS25P82663 173 aaKnown RBP18.69■□□□□ 0.58
CDX4-201ENST00000373514 SEMG2Q02383 582 aa18.69■□□□□ 0.58
CDX4-201ENST00000373514 GRM3Q14832 879 aa18.69■□□□□ 0.58
CDX4-201ENST00000373514 SPATA22Q8NHS9 363 aa18.69■□□□□ 0.58
CDX4-201ENST00000373514 HSPA12BQ96MM6 686 aa18.69■□□□□ 0.58
CDX4-201ENST00000373514 IRF2BPLQ9H1B7 796 aa18.69■□□□□ 0.58
CDX4-201ENST00000373514 GLOD4Q9HC38 313 aa18.69■□□□□ 0.58
CDX4-201ENST00000373514 SCN8AQ9UQD0 1980 aa18.69■□□□□ 0.58
CDX4-201ENST00000373514 ADAMTS9Q9P2N4 1935 aa18.68■□□□□ 0.58
CDX4-201ENST00000373514 DYNC1I1O14576 645 aa18.68■□□□□ 0.58
CDX4-201ENST00000373514 SKOR1P84550 965 aa18.68■□□□□ 0.58
CDX4-201ENST00000373514 OASLQ15646 514 aaKnown RBP18.68■□□□□ 0.58
CDX4-201ENST00000373514 CYP1B1Q16678 543 aa18.68■□□□□ 0.58
CDX4-201ENST00000373514 GLE1Q53GS7 698 aaKnown RBP18.68■□□□□ 0.58
CDX4-201ENST00000373514 FBXL19Q6PCT2 694 aa18.68■□□□□ 0.58
CDX4-201ENST00000373514 SLC36A4Q6YBV0 504 aa18.68■□□□□ 0.58
CDX4-201ENST00000373514 PRUNE1Q86TP1 453 aa18.68■□□□□ 0.58
CDX4-201ENST00000373514 PRPF39Q86UA1 669 aaKnown RBP18.68■□□□□ 0.58
CDX4-201ENST00000373514 FAM71DQ8N9W8 422 aa18.68■□□□□ 0.58
CDX4-201ENST00000373514 C12orf50Q8NA57 414 aaPredicted RBP18.68■□□□□ 0.58
CDX4-201ENST00000373514 SUMF1Q8NBK3 374 aa18.68■□□□□ 0.58
CDX4-201ENST00000373514 CCDC110Q8TBZ0 833 aa18.68■□□□□ 0.58
CDX4-201ENST00000373514 MAGOHBQ96A72 148 aaKnown RBP18.68■□□□□ 0.58
CDX4-201ENST00000373514 ECHDC3Q96DC8 303 aa18.68■□□□□ 0.58
CDX4-201ENST00000373514 ZNF641Q96N77 438 aaPredicted RBP18.68■□□□□ 0.58
CDX4-201ENST00000373514 SMIM14Q96QK8 99 aa18.68■□□□□ 0.58
CDX4-201ENST00000373514 GORASP1Q9BQQ3 440 aa18.68■□□□□ 0.58
CDX4-201ENST00000373514 SGK2Q9HBY8 427 aa18.68■□□□□ 0.58
CDX4-201ENST00000373514 RAI2Q9Y5P3 530 aa18.68■□□□□ 0.58
CDX4-201ENST00000373514 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.67■□□□□ 0.58
CDX4-201ENST00000373514 MTSS1O43312 755 aa18.67■□□□□ 0.58
CDX4-201ENST00000373514 RAD51CO43502 376 aa18.67■□□□□ 0.58
CDX4-201ENST00000373514 MT-CYBP00156 380 aaPredicted RBP18.67■□□□□ 0.58
CDX4-201ENST00000373514 PDHA1P08559 390 aa18.67■□□□□ 0.58
CDX4-201ENST00000373514 TIMP2P16035 220 aa18.67■□□□□ 0.58
CDX4-201ENST00000373514 DHPSP49366 369 aaPredicted RBP18.67■□□□□ 0.58
CDX4-201ENST00000373514 ANKRD20A2Q5SQ80 823 aa18.67■□□□□ 0.58
CDX4-201ENST00000373514 CFAP58Q5T655 872 aa18.67■□□□□ 0.58
CDX4-201ENST00000373514 ANKRD20A1Q5TYW2 823 aa18.67■□□□□ 0.58
CDX4-201ENST00000373514 ANKRD20A3Q5VUR7 823 aa18.67■□□□□ 0.58
CDX4-201ENST00000373514 PID1Q7Z2X4 250 aa18.67■□□□□ 0.58
CDX4-201ENST00000373514 PAF1Q8N7H5 531 aa18.67■□□□□ 0.58
CDX4-201ENST00000373514 IMP4Q96G21 291 aaKnown RBP18.67■□□□□ 0.58
CDX4-201ENST00000373514 TDRD1Q9BXT4 1180 aaKnown RBP18.67■□□□□ 0.58
CDX4-201ENST00000373514 UBP1Q9NZI7 540 aa18.67■□□□□ 0.58
CDX4-201ENST00000373514 DKK3Q9UBP4 350 aa18.67■□□□□ 0.58
CDX4-201ENST00000373514 UPK3BL1B0FP48 263 aa18.66■□□□□ 0.58
CDX4-201ENST00000373514 UPK3BL2E5RIL1 263 aa18.66■□□□□ 0.58
CDX4-201ENST00000373514 SLC7A4O43246 635 aa18.66■□□□□ 0.58
CDX4-201ENST00000373514 HTRA2O43464 458 aaPredicted RBP18.66■□□□□ 0.58
CDX4-201ENST00000373514 FSBPO95073 299 aa18.66■□□□□ 0.58
CDX4-201ENST00000373514 CPP00450 1065 aa18.66■□□□□ 0.58
CDX4-201ENST00000373514 SLC7A5Q01650 507 aa18.66■□□□□ 0.58
CDX4-201ENST00000373514 SFSWAPQ12872 951 aaKnown RBP18.66■□□□□ 0.58
CDX4-201ENST00000373514 PTPRRQ15256 657 aa18.66■□□□□ 0.58
CDX4-201ENST00000373514 PCSK7Q16549 785 aa18.66■□□□□ 0.58
CDX4-201ENST00000373514 RALGPS1Q5JS13 557 aa18.66■□□□□ 0.58
CDX4-201ENST00000373514 LPCAT2Q7L5N7 544 aa18.66■□□□□ 0.58
CDX4-201ENST00000373514 OR2T34Q8NGX1 318 aa18.66■□□□□ 0.58
CDX4-201ENST00000373514 SNX19Q92543 992 aa18.66■□□□□ 0.58
CDX4-201ENST00000373514 NKD2Q969F2 451 aaPredicted RBP18.66■□□□□ 0.58
CDX4-201ENST00000373514 ZC3H10Q96K80 434 aaKnown RBP18.66■□□□□ 0.58
CDX4-201ENST00000373514 VAT1Q99536 393 aa18.66■□□□□ 0.58
CDX4-201ENST00000373514 SLC25A51Q9H1U9 297 aa18.66■□□□□ 0.58
CDX4-201ENST00000373514 GBA3Q9H227 469 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms