RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 EPHB1P54762 984 aa18.88■□□□□ 0.61
USP49-202ENST00000373010 PRKAA1Q13131 559 aa18.88■□□□□ 0.61
USP49-202ENST00000373010 LSM12Q3MHD2 195 aaKnown RBP18.88■□□□□ 0.61
USP49-202ENST00000373010 PRSS55Q6UWB4 352 aaPredicted RBP18.88■□□□□ 0.61
USP49-202ENST00000373010 CFAP52Q8N1V2 620 aa18.88■□□□□ 0.61
USP49-202ENST00000373010 EFCAB3Q8N7B9 438 aa18.88■□□□□ 0.61
USP49-202ENST00000373010 ZNF333Q96JL9 665 aa18.88■□□□□ 0.61
USP49-202ENST00000373010 DONSONQ9NYP3 566 aa18.88■□□□□ 0.61
USP49-202ENST00000373010 EIF4E1BA6NMX2 242 aaKnown RBP18.88■□□□□ 0.61
USP49-202ENST00000373010 MUSKO15146 869 aa18.88■□□□□ 0.61
USP49-202ENST00000373010 ITGAXP20702 1163 aa18.88■□□□□ 0.61
USP49-202ENST00000373010 SERPINB5P36952 375 aa18.88■□□□□ 0.61
USP49-202ENST00000373010 PSEN1P49768 467 aa18.88■□□□□ 0.61
USP49-202ENST00000373010 IL10RBQ08334 325 aa18.88■□□□□ 0.61
USP49-202ENST00000373010 LBRQ14739 615 aaKnown RBP18.88■□□□□ 0.61
USP49-202ENST00000373010 TSNAXIP1Q2TAA8 658 aa18.88■□□□□ 0.61
USP49-202ENST00000373010 KIAA0408Q6ZU52 694 aa18.88■□□□□ 0.61
USP49-202ENST00000373010 MYLK4Q86YV6 388 aaPredicted RBP18.88■□□□□ 0.61
USP49-202ENST00000373010 MAB21L3Q8N8X9 362 aa18.88■□□□□ 0.61
USP49-202ENST00000373010 OR6P1Q8NGX9 317 aa18.88■□□□□ 0.61
USP49-202ENST00000373010 SPPL2BQ8TCT7 592 aa18.88■□□□□ 0.61
USP49-202ENST00000373010 HDAC10Q969S8 669 aa18.88■□□□□ 0.61
USP49-202ENST00000373010 HHIPL1Q96JK4 782 aa18.88■□□□□ 0.61
USP49-202ENST00000373010 SEMA3CQ99985 751 aa18.88■□□□□ 0.61
USP49-202ENST00000373010 TMEM233B4DJY2 109 aa18.87■□□□□ 0.61
USP49-202ENST00000373010 TLR5O60602 858 aa18.87■□□□□ 0.61
USP49-202ENST00000373010 INHAP05111 366 aa18.87■□□□□ 0.61
USP49-202ENST00000373010 ATXN1LP0C7T5 689 aaKnown RBP18.87■□□□□ 0.61
USP49-202ENST00000373010 COL6A1P12109 1028 aa18.87■□□□□ 0.61
USP49-202ENST00000373010 ABL2P42684 1182 aa18.87■□□□□ 0.61
USP49-202ENST00000373010 LEPRP48357 1165 aaKnown RBP18.87■□□□□ 0.61
USP49-202ENST00000373010 METTL21CQ5VZV1 264 aa18.87■□□□□ 0.61
USP49-202ENST00000373010 CALML6Q8TD86 181 aa18.87■□□□□ 0.61
USP49-202ENST00000373010 LENG8Q96PV6 779 aaPredicted RBP18.87■□□□□ 0.61
USP49-202ENST00000373010 MRPL57Q9BQC6 102 aaKnown RBP18.87■□□□□ 0.61
USP49-202ENST00000373010 POMKQ9H5K3 350 aa18.87■□□□□ 0.61
USP49-202ENST00000373010 MARCH4Q9P2E8 410 aaPredicted RBP18.87■□□□□ 0.61
USP49-202ENST00000373010 LRFN2Q9ULH4 789 aa18.87■□□□□ 0.61
USP49-202ENST00000373010 MROH6A6NGR9 719 aa18.86■□□□□ 0.61
USP49-202ENST00000373010 BUD23O43709 281 aaKnown RBP18.86■□□□□ 0.61
USP49-202ENST00000373010 TBC1D4O60343 1298 aa18.86■□□□□ 0.61
USP49-202ENST00000373010 ATP6V1C1P21283 382 aa18.86■□□□□ 0.61
USP49-202ENST00000373010 TACR2P21452 398 aa18.86■□□□□ 0.61
USP49-202ENST00000373010 HOXD10P28358 340 aa18.86■□□□□ 0.61
USP49-202ENST00000373010 PDCD2Q16342 344 aaPredicted RBP18.86■□□□□ 0.61
USP49-202ENST00000373010 DEFB107AQ8IZN7 70 aa18.86■□□□□ 0.61
USP49-202ENST00000373010 LGI2Q8N0V4 545 aa18.86■□□□□ 0.61
USP49-202ENST00000373010 BCL7CQ8WUZ0 217 aaPredicted RBP18.86■□□□□ 0.61
USP49-202ENST00000373010 TADA1Q96BN2 335 aa18.86■□□□□ 0.61
USP49-202ENST00000373010 SPATA17Q96L03 361 aa18.86■□□□□ 0.61
USP49-202ENST00000373010 ELAC1Q9H777 363 aaKnown RBP18.86■□□□□ 0.61
USP49-202ENST00000373010 SSX2IPQ9Y2D8 614 aa18.86■□□□□ 0.61
USP49-202ENST00000373010 ACTL7AQ9Y615 435 aa18.86■□□□□ 0.61
USP49-202ENST00000373010 TRPA1O75762 1119 aa18.86■□□□□ 0.61
USP49-202ENST00000373010 NOGQ13253 232 aa18.86■□□□□ 0.61
USP49-202ENST00000373010 PTPRCAPQ14761 206 aa18.86■□□□□ 0.61
USP49-202ENST00000373010 PARP15Q460N3 678 aa18.86■□□□□ 0.61
USP49-202ENST00000373010 TMEM198Q66K66 360 aa18.86■□□□□ 0.61
USP49-202ENST00000373010 CILP2Q8IUL8 1156 aa18.86■□□□□ 0.61
USP49-202ENST00000373010 SCG3Q8WXD2 468 aaKnown RBP18.86■□□□□ 0.61
USP49-202ENST00000373010 CXorf56Q9H5V9 222 aa18.86■□□□□ 0.61
USP49-202ENST00000373010 SUDS3Q9H7L9 328 aaPredicted RBP18.86■□□□□ 0.61
USP49-202ENST00000373010 CYP4F12Q9HCS2 524 aa18.86■□□□□ 0.61
USP49-202ENST00000373010 MTF2Q9Y483 593 aaPredicted RBP18.86■□□□□ 0.61
USP49-202ENST00000373010 LOC285095A0A1B0GVY8 99 aa18.85■□□□□ 0.61
USP49-202ENST00000373010 SLC38A8A6NNN8 435 aa18.85■□□□□ 0.61
USP49-202ENST00000373010 ADAM12O43184 909 aa18.85■□□□□ 0.61
USP49-202ENST00000373010 PAPSS2O95340 614 aaPredicted RBP18.85■□□□□ 0.61
USP49-202ENST00000373010 ATF6P18850 670 aa18.85■□□□□ 0.61
USP49-202ENST00000373010 KCNA5P22460 613 aa18.85■□□□□ 0.61
USP49-202ENST00000373010 PRDX6P30041 224 aa18.85■□□□□ 0.61
USP49-202ENST00000373010 CLCN5P51795 746 aa18.85■□□□□ 0.61
USP49-202ENST00000373010 RING1Q06587 406 aa18.85■□□□□ 0.61
USP49-202ENST00000373010 HECTD2Q5U5R9 776 aa18.85■□□□□ 0.61
USP49-202ENST00000373010 TRIM67Q6ZTA4 783 aa18.85■□□□□ 0.61
USP49-202ENST00000373010 ACTRT2Q8TDY3 377 aa18.85■□□□□ 0.61
USP49-202ENST00000373010 YY1AP1Q9H869 796 aa18.85■□□□□ 0.61
USP49-202ENST00000373010 LDB2O43679 373 aa18.85■□□□□ 0.61
USP49-202ENST00000373010 PRAMEF11O60813 436 aa18.85■□□□□ 0.61
USP49-202ENST00000373010 ZDHHC11BP0C7U3 371 aa18.85■□□□□ 0.61
USP49-202ENST00000373010 CCDC166P0CW27 439 aa18.85■□□□□ 0.61
USP49-202ENST00000373010 ANPEPP15144 967 aa18.85■□□□□ 0.61
USP49-202ENST00000373010 PIK3R1P27986 724 aa18.85■□□□□ 0.61
USP49-202ENST00000373010 TNK2Q07912 1038 aa18.85■□□□□ 0.61
USP49-202ENST00000373010 NSUN2Q08J23 767 aaKnown RBP eCLIP18.85■□□□□ 0.61
USP49-202ENST00000373010 TECRLQ5HYJ1 363 aa18.85■□□□□ 0.61
USP49-202ENST00000373010 PPM1LQ5SGD2 360 aa18.85■□□□□ 0.61
USP49-202ENST00000373010 NXNQ6DKJ4 435 aa18.85■□□□□ 0.61
USP49-202ENST00000373010 PGM2L1Q6PCE3 622 aa18.85■□□□□ 0.61
USP49-202ENST00000373010 KDM1BQ8NB78 822 aa18.85■□□□□ 0.61
USP49-202ENST00000373010 SH3RF2Q8TEC5 729 aa18.85■□□□□ 0.61
USP49-202ENST00000373010 ANKRD49Q8WVL7 239 aa18.85■□□□□ 0.61
USP49-202ENST00000373010 CCDC124Q96CT7 223 aaKnown RBP18.85■□□□□ 0.61
USP49-202ENST00000373010 MARK4Q96L34 752 aa18.85■□□□□ 0.61
USP49-202ENST00000373010 CATSPER2Q96P56 530 aa18.85■□□□□ 0.61
USP49-202ENST00000373010 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.85■□□□□ 0.61
USP49-202ENST00000373010 CDH22Q9UJ99 828 aa18.85■□□□□ 0.61
USP49-202ENST00000373010 PPM1HQ9ULR3 514 aa18.85■□□□□ 0.61
USP49-202ENST00000373010 A0A0D9SEW6 157 aa18.84■□□□□ 0.61
USP49-202ENST00000373010 TBKBP1A7MCY6 615 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms