RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 WDR12Q9GZL7 423 aaKnown RBP8.94□□□□□ -0.98
ATG4A-203ENST00000372232 KCNN2Q9H2S1 579 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 PARVAQ9NVD7 372 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 AP3M1Q9Y2T2 418 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 ST14Q9Y5Y6 855 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 IGKV6D-21A0A0A0MT36 114 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 IFRD1O00458 451 aaPredicted RBP8.93□□□□□ -0.98
ATG4A-203ENST00000372232 KLF11O14901 512 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 NDUFA2O43678 99 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 SPAG6O75602 509 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 SORBS2O94875 1100 aaKnown RBP8.93□□□□□ -0.98
ATG4A-203ENST00000372232 PRLP01236 227 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 SERPINA6P08185 405 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 DHRS4L1P0CG22 281 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 KRT10P13645 584 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 GLRA2P23416 452 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 RFC1P35251 1148 aaPredicted RBP8.93□□□□□ -0.98
ATG4A-203ENST00000372232 ARL2P36404 184 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 ZNF157P51786 506 aaPredicted RBP8.93□□□□□ -0.98
ATG4A-203ENST00000372232 CDH15P55291 814 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 COPZ1P61923 177 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 MESDQ14696 234 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 MAPRE1Q15691 268 aaKnown RBP8.93□□□□□ -0.98
ATG4A-203ENST00000372232 RALGPS1Q5JS13 557 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 UGT3A1Q6NUS8 523 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 DLK2Q6UY11 383 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 UNC5AQ6ZN44 842 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 LRRC69Q6ZNQ3 347 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 SLC13A5Q86YT5 568 aaPredicted RBP8.93□□□□□ -0.98
ATG4A-203ENST00000372232 RIOX2Q8IUF8 465 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 HERC6Q8IVU3 1022 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 SYNPOQ8N3V7 929 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 FBXW8Q8N3Y1 598 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 FBXL6Q8N531 539 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 HIPK4Q8NE63 616 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 ZNF564Q8TBZ8 553 aaPredicted RBP8.93□□□□□ -0.98
ATG4A-203ENST00000372232 GATAD2BQ8WXI9 593 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 SLC7A3Q8WY07 619 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 CD101Q93033 1021 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 REXO5Q96IC2 774 aaKnown RBP8.93□□□□□ -0.98
ATG4A-203ENST00000372232 FAM84AQ96KN4 292 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 CEP19Q96LK0 163 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 C9orf72Q96LT7 481 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 ZNF597Q96LX8 424 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 CLUHP3Q96NS8 147 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 CNTNAP3BQ96NU0 1288 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 LPIN3Q9BQK8 851 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 OSBPL11Q9BXB4 747 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 LRRC3Q9BY71 257 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 CNTNAP3Q9BZ76 1288 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 CPNE5Q9HCH3 593 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 FARSBQ9NSD9 589 aaKnown RBP8.93□□□□□ -0.98
ATG4A-203ENST00000372232 FBXO40Q9UH90 709 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 ASIC3Q9UHC3 531 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 SLC24A2Q9UI40 661 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 ANAPC5Q9UJX4 755 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 TESMINQ9Y4I5 508 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 KIAA1217Q5T5P2 1943 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 ARHGEF37A1IGU5 675 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 PABPN1LA6NDY0 278 aaKnown RBP8.93□□□□□ -0.98
ATG4A-203ENST00000372232 H0YC42 278 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 BET1O15155 118 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 PIGRP01833 764 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 ICAM2P13598 275 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 ZNF182P17025 639 aaPredicted RBP8.93□□□□□ -0.98
ATG4A-203ENST00000372232 UBA1P22314 1058 aaKnown RBP8.93□□□□□ -0.98
ATG4A-203ENST00000372232 PTPN9P43378 593 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 SLC9A3P48764 834 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 MARCKSL1P49006 195 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 CLK1P49759 484 aaKnown RBP8.93□□□□□ -0.98
ATG4A-203ENST00000372232 TPD52P55327 224 aaPredicted RBP8.93□□□□□ -0.98
ATG4A-203ENST00000372232 NLRP11P59045 1033 aaKnown RBP8.93□□□□□ -0.98
ATG4A-203ENST00000372232 TRAF2Q12933 501 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 DLG2Q15700 870 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 ZACNQ401N2 412 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 GPR107Q5VW38 600 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 ACAD10Q6JQN1 1059 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 TMEM26Q6ZUK4 368 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 REC114Q7Z4M0 266 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 ANKS1BQ7Z6G8 1248 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 CARNMT1Q8N4J0 409 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 ST13P5Q8NFI4 369 aaPredicted RBP8.93□□□□□ -0.98
ATG4A-203ENST00000372232 GRPEL2Q8TAA5 225 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 TCP10LQ8TDR4 215 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 SH3YL1Q96HL8 342 aaPredicted RBP8.93□□□□□ -0.98
ATG4A-203ENST00000372232 PCYT2Q99447 389 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 FOXP3Q9BZS1 431 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 HAPLN2Q9GZV7 340 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 MAGEE1Q9HCI5 957 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 C1orf112Q9NSG2 853 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 GIMAP4Q9NUV9 329 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 TNFRSF10DQ9UBN6 386 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 ITGA11Q9UKX5 1188 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 NUP50Q9UKX7 468 aa8.93□□□□□ -0.98
ATG4A-203ENST00000372232 GSTTP1A0A1W2PQM5 241 aa8.92□□□□□ -0.98
ATG4A-203ENST00000372232 TCRBV7S2A1N4TA0A589 114 aa8.92□□□□□ -0.98
ATG4A-203ENST00000372232 FAM155AB1AL88 458 aaPredicted RBP8.92□□□□□ -0.98
ATG4A-203ENST00000372232 K7ERI5 159 aa8.92□□□□□ -0.98
ATG4A-203ENST00000372232 FAM189A1O60320 539 aa8.92□□□□□ -0.98
ATG4A-203ENST00000372232 BCL10O95999 233 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms