RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 DCLK2Q8N568 766 aa14.97□□□□□ -0.01
COL9A1-204ENST00000370496 C12orf50Q8NA57 414 aaPredicted RBP14.97□□□□□ -0.01
COL9A1-204ENST00000370496 HCAR2Q8TDS4 363 aa14.97□□□□□ -0.01
COL9A1-204ENST00000370496 HTR3CQ8WXA8 447 aa14.97□□□□□ -0.01
COL9A1-204ENST00000370496 TLR10Q9BXR5 811 aa14.97□□□□□ -0.01
COL9A1-204ENST00000370496 SMOC1Q9H4F8 434 aa14.97□□□□□ -0.01
COL9A1-204ENST00000370496 PILRBQ9UKJ0 227 aa14.97□□□□□ -0.01
COL9A1-204ENST00000370496 ATP8A1Q9Y2Q0 1164 aa14.97□□□□□ -0.01
COL9A1-204ENST00000370496 JRKLQ9Y4A0 524 aa14.97□□□□□ -0.01
COL9A1-204ENST00000370496 PCDHGC4Q9Y5F7 938 aa14.97□□□□□ -0.01
COL9A1-204ENST00000370496 FADS3Q9Y5Q0 445 aa14.97□□□□□ -0.01
COL9A1-204ENST00000370496 TP53BP1Q12888 1972 aaPredicted RBP14.96□□□□□ -0.01
COL9A1-204ENST00000370496 ZFHX2Q9C0A1 2572 aaPredicted RBP14.96□□□□□ -0.01
COL9A1-204ENST00000370496 A0A1W2PQ67 120 aa14.96□□□□□ -0.02
COL9A1-204ENST00000370496 A0A1W2PQU0 124 aa14.96□□□□□ -0.02
COL9A1-204ENST00000370496 ENC1O14682 589 aa14.96□□□□□ -0.02
COL9A1-204ENST00000370496 TSPAN6O43657 245 aa14.96□□□□□ -0.02
COL9A1-204ENST00000370496 ZNF189O75820 626 aaPredicted RBP14.96□□□□□ -0.02
COL9A1-204ENST00000370496 NFKBIAP25963 317 aa14.96□□□□□ -0.02
COL9A1-204ENST00000370496 CD27P26842 260 aa14.96□□□□□ -0.02
COL9A1-204ENST00000370496 SUOXP51687 545 aa14.96□□□□□ -0.02
COL9A1-204ENST00000370496 POLR2LP62875 67 aaKnown RBP14.96□□□□□ -0.02
COL9A1-204ENST00000370496 TRAF2Q12933 501 aa14.96□□□□□ -0.02
COL9A1-204ENST00000370496 UGP2Q16851 508 aa14.96□□□□□ -0.02
COL9A1-204ENST00000370496 PEAR1Q5VY43 1037 aaPredicted RBP14.96□□□□□ -0.02
COL9A1-204ENST00000370496 NEK5Q6P3R8 708 aa14.96□□□□□ -0.02
COL9A1-204ENST00000370496 DARS2Q6PI48 645 aaKnown RBP14.96□□□□□ -0.02
COL9A1-204ENST00000370496 PRPF39Q86UA1 669 aaKnown RBP14.96□□□□□ -0.02
COL9A1-204ENST00000370496 ALYREFQ86V81 257 aaKnown RBP14.96□□□□□ -0.02
COL9A1-204ENST00000370496 HORMAD1Q86X24 394 aa14.96□□□□□ -0.02
COL9A1-204ENST00000370496 ZSWIM9Q86XI8 627 aa14.96□□□□□ -0.02
COL9A1-204ENST00000370496 SLC13A5Q86YT5 568 aaPredicted RBP14.96□□□□□ -0.02
COL9A1-204ENST00000370496 CXorf40AQ8TE69 158 aa14.96□□□□□ -0.02
COL9A1-204ENST00000370496 DNASE2BQ8WZ79 361 aa14.96□□□□□ -0.02
COL9A1-204ENST00000370496 ECHDC3Q96DC8 303 aa14.96□□□□□ -0.02
COL9A1-204ENST00000370496 VAT1Q99536 393 aa14.96□□□□□ -0.02
COL9A1-204ENST00000370496 SEMA4GQ9NTN9 838 aa14.96□□□□□ -0.02
COL9A1-204ENST00000370496 TMEM74BQ9NUR3 256 aa14.96□□□□□ -0.02
COL9A1-204ENST00000370496 GGT7Q9UJ14 662 aa14.96□□□□□ -0.02
COL9A1-204ENST00000370496 PCDHB9Q9Y5E1 797 aa14.96□□□□□ -0.02
COL9A1-204ENST00000370496 RAI2Q9Y5P3 530 aa14.96□□□□□ -0.02
COL9A1-204ENST00000370496 FRYLO94915 3013 aa14.95□□□□□ -0.02
COL9A1-204ENST00000370496 A0A1W2PPC4 97 aa14.95□□□□□ -0.02
COL9A1-204ENST00000370496 TCRBV7S2A1N4TA0A589 114 aa14.95□□□□□ -0.02
COL9A1-204ENST00000370496 TRAFD1O14545 582 aaPredicted RBP14.95□□□□□ -0.02
COL9A1-204ENST00000370496 KCNN4O15554 427 aa14.95□□□□□ -0.02
COL9A1-204ENST00000370496 PRKCGP05129 697 aa14.95□□□□□ -0.02
COL9A1-204ENST00000370496 TIMP2P16035 220 aa14.95□□□□□ -0.02
COL9A1-204ENST00000370496 RBL1P28749 1068 aa14.95□□□□□ -0.02
COL9A1-204ENST00000370496 CXCR5P32302 372 aa14.95□□□□□ -0.02
COL9A1-204ENST00000370496 NUDT1P36639 197 aa14.95□□□□□ -0.02
COL9A1-204ENST00000370496 CD86P42081 329 aa14.95□□□□□ -0.02
COL9A1-204ENST00000370496 RPS21P63220 83 aaKnown RBP14.95□□□□□ -0.02
COL9A1-204ENST00000370496 CSRP2Q16527 193 aa14.95□□□□□ -0.02
COL9A1-204ENST00000370496 TEX44Q53QW1 395 aa14.95□□□□□ -0.02
COL9A1-204ENST00000370496 TRIM61Q5EBN2 209 aa14.95□□□□□ -0.02
COL9A1-204ENST00000370496 PLA2G2CQ5R387 149 aa14.95□□□□□ -0.02
COL9A1-204ENST00000370496 ARMC12Q5T9G4 340 aa14.95□□□□□ -0.02
COL9A1-204ENST00000370496 SEL1L3Q68CR1 1132 aa14.95□□□□□ -0.02
COL9A1-204ENST00000370496 TCEAL6Q6IPX3 200 aa14.95□□□□□ -0.02
COL9A1-204ENST00000370496 ADAT2Q7Z6V5 191 aaKnown RBP14.95□□□□□ -0.02
COL9A1-204ENST00000370496 ZSCAN30Q86W11 494 aa14.95□□□□□ -0.02
COL9A1-204ENST00000370496 CNTD1Q8N815 330 aa14.95□□□□□ -0.02
COL9A1-204ENST00000370496 CEP76Q8TAP6 659 aa14.95□□□□□ -0.02
COL9A1-204ENST00000370496 ARRDC2Q8TBH0 407 aa14.95□□□□□ -0.02
COL9A1-204ENST00000370496 TCEAL3Q969E4 200 aa14.95□□□□□ -0.02
COL9A1-204ENST00000370496 NSMCE3Q96MG7 304 aa14.95□□□□□ -0.02
COL9A1-204ENST00000370496 WRAP53Q9BUR4 548 aaKnown RBP14.95□□□□□ -0.02
COL9A1-204ENST00000370496 PCDH12Q9NPG4 1184 aa14.95□□□□□ -0.02
COL9A1-204ENST00000370496 AASDHPPTQ9NRN7 309 aa14.95□□□□□ -0.02
COL9A1-204ENST00000370496 A0A1B0GTW7 788 aa14.94□□□□□ -0.02
COL9A1-204ENST00000370496 PRR5-ARHGAP8B1AHC4 643 aa14.94□□□□□ -0.02
COL9A1-204ENST00000370496 PATE3B3GLJ2 98 aa14.94□□□□□ -0.02
COL9A1-204ENST00000370496 AREL1O15033 823 aa14.94□□□□□ -0.02
COL9A1-204ENST00000370496 KHNYNO15037 678 aaKnown RBP14.94□□□□□ -0.02
COL9A1-204ENST00000370496 BCAT2O15382 392 aaPredicted RBP14.94□□□□□ -0.02
COL9A1-204ENST00000370496 SPINT1O43278 529 aa14.94□□□□□ -0.02
COL9A1-204ENST00000370496 HTRA2O43464 458 aaPredicted RBP14.94□□□□□ -0.02
COL9A1-204ENST00000370496 LATO43561 262 aa14.94□□□□□ -0.02
COL9A1-204ENST00000370496 CEP104O60308 925 aa14.94□□□□□ -0.02
COL9A1-204ENST00000370496 PGLSO95336 258 aa14.94□□□□□ -0.02
COL9A1-204ENST00000370496 PRLRP16471 622 aa14.94□□□□□ -0.02
COL9A1-204ENST00000370496 MMP12P39900 470 aa14.94□□□□□ -0.02
COL9A1-204ENST00000370496 AFF3P51826 1226 aaKnown RBP14.94□□□□□ -0.02
COL9A1-204ENST00000370496 EPHB1P54762 984 aa14.94□□□□□ -0.02
COL9A1-204ENST00000370496 FAM193AP78312 1265 aa14.94□□□□□ -0.02
COL9A1-204ENST00000370496 NIPAL4Q0D2K0 466 aa14.94□□□□□ -0.02
COL9A1-204ENST00000370496 WASHC5Q12768 1159 aa14.94□□□□□ -0.02
COL9A1-204ENST00000370496 DUOXA1Q1HG43 343 aa14.94□□□□□ -0.02
COL9A1-204ENST00000370496 AASDHQ4L235 1098 aaPredicted RBP14.94□□□□□ -0.02
COL9A1-204ENST00000370496 FAM182AQ5T1J6 154 aa14.94□□□□□ -0.02
COL9A1-204ENST00000370496 NAPEPLDQ6IQ20 393 aa14.94□□□□□ -0.02
COL9A1-204ENST00000370496 PRR23CQ6ZRP0 262 aa14.94□□□□□ -0.02
COL9A1-204ENST00000370496 ZNF567Q8N184 647 aa14.94□□□□□ -0.02
COL9A1-204ENST00000370496 GPR161Q8N6U8 529 aaKnown RBP14.94□□□□□ -0.02
COL9A1-204ENST00000370496 ATG4AQ8WYN0 398 aa14.94□□□□□ -0.02
COL9A1-204ENST00000370496 KLK6Q92876 244 aa14.94□□□□□ -0.02
COL9A1-204ENST00000370496 FEM1CQ96JP0 617 aa14.94□□□□□ -0.02
COL9A1-204ENST00000370496 SERAC1Q96JX3 654 aa14.94□□□□□ -0.02
COL9A1-204ENST00000370496 TEKT5Q96M29 485 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms