RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 THEGLP0DJG4 465 aa20.74■□□□□ 0.91
SMNDC1-201ENST00000369592 SERPINB6P35237 376 aa20.74■□□□□ 0.91
SMNDC1-201ENST00000369592 GRK6P43250 576 aa20.74■□□□□ 0.91
SMNDC1-201ENST00000369592 CLDN2P57739 230 aa20.74■□□□□ 0.91
SMNDC1-201ENST00000369592 IL9RQ01113 521 aa20.74■□□□□ 0.91
SMNDC1-201ENST00000369592 GALNT2Q10471 571 aa20.74■□□□□ 0.91
SMNDC1-201ENST00000369592 KRT81Q14533 505 aa20.74■□□□□ 0.91
SMNDC1-201ENST00000369592 LBRQ14739 615 aaKnown RBP20.74■□□□□ 0.91
SMNDC1-201ENST00000369592 UGP2Q16851 508 aa20.74■□□□□ 0.91
SMNDC1-201ENST00000369592 ANKRD20A8PQ5CZ79 823 aa20.74■□□□□ 0.91
SMNDC1-201ENST00000369592 LRRC73Q5JTD7 316 aa20.74■□□□□ 0.91
SMNDC1-201ENST00000369592 NCBP2-AS2Q69YL0 99 aa20.74■□□□□ 0.91
SMNDC1-201ENST00000369592 KYAT3Q6YP21 454 aaKnown RBP20.74■□□□□ 0.91
SMNDC1-201ENST00000369592 RAB44Q7Z6P3 723 aaPredicted RBP20.74■□□□□ 0.91
SMNDC1-201ENST00000369592 SLCO6A1Q86UG4 719 aa20.74■□□□□ 0.91
SMNDC1-201ENST00000369592 TEX26Q8N6G2 289 aa20.74■□□□□ 0.91
SMNDC1-201ENST00000369592 DENND6BQ8NEG7 585 aa20.74■□□□□ 0.91
SMNDC1-201ENST00000369592 RHBDD1Q8TEB9 315 aa20.74■□□□□ 0.91
SMNDC1-201ENST00000369592 SETD7Q8WTS6 366 aaKnown RBP20.74■□□□□ 0.91
SMNDC1-201ENST00000369592 FATE1Q969F0 183 aa20.74■□□□□ 0.91
SMNDC1-201ENST00000369592 CDC6Q99741 560 aa20.74■□□□□ 0.91
SMNDC1-201ENST00000369592 MYOCQ99972 504 aa20.74■□□□□ 0.91
SMNDC1-201ENST00000369592 ZMIZ1Q9ULJ6 1067 aa20.74■□□□□ 0.91
SMNDC1-201ENST00000369592 FAM221BA6H8Z2 402 aa20.73■□□□□ 0.91
SMNDC1-201ENST00000369592 C3orf70A6NLC5 250 aaPredicted RBP20.73■□□□□ 0.91
SMNDC1-201ENST00000369592 ZNF487B1APH4 448 aa20.73■□□□□ 0.91
SMNDC1-201ENST00000369592 C1QTNF9BB2RNN3 333 aa20.73■□□□□ 0.91
SMNDC1-201ENST00000369592 C1QTNF9P0C862 333 aa20.73■□□□□ 0.91
SMNDC1-201ENST00000369592 HADHBP55084 474 aaKnown RBP20.73■□□□□ 0.91
SMNDC1-201ENST00000369592 BNIP3Q12983 259 aa20.73■□□□□ 0.91
SMNDC1-201ENST00000369592 MESDQ14696 234 aa20.73■□□□□ 0.91
SMNDC1-201ENST00000369592 BRAT1Q6PJG6 821 aa20.73■□□□□ 0.91
SMNDC1-201ENST00000369592 UNQ6494/PRO21346Q6UXR6 183 aa20.73■□□□□ 0.91
SMNDC1-201ENST00000369592 VSIG1Q86XK7 387 aa20.73■□□□□ 0.91
SMNDC1-201ENST00000369592 GATAD2AQ86YP4 633 aa20.73■□□□□ 0.91
SMNDC1-201ENST00000369592 RAPGEF5Q92565 580 aa20.73■□□□□ 0.91
SMNDC1-201ENST00000369592 MGME1Q9BQP7 344 aa20.73■□□□□ 0.91
SMNDC1-201ENST00000369592 CINPQ9BW66 212 aaPredicted RBP20.73■□□□□ 0.91
SMNDC1-201ENST00000369592 KLHL11Q9NVR0 708 aa20.73■□□□□ 0.91
SMNDC1-201ENST00000369592 KNTC1P50748 2209 aa20.73■□□□□ 0.91
SMNDC1-201ENST00000369592 GOLGA4Q13439 2230 aaKnown RBP20.73■□□□□ 0.91
SMNDC1-201ENST00000369592 PKD1L2Q7Z442 2459 aa20.72■□□□□ 0.91
SMNDC1-201ENST00000369592 PLXNB3Q9ULL4 1909 aa20.72■□□□□ 0.91
SMNDC1-201ENST00000369592 RIOK3O14730 519 aaKnown RBP20.72■□□□□ 0.91
SMNDC1-201ENST00000369592 HTRA2O43464 458 aaPredicted RBP20.72■□□□□ 0.91
SMNDC1-201ENST00000369592 MFSD11O43934 449 aa20.72■□□□□ 0.91
SMNDC1-201ENST00000369592 FTH1P19P0C7X4 201 aa20.72■□□□□ 0.91
SMNDC1-201ENST00000369592 KDELR1P24390 212 aa20.72■□□□□ 0.91
SMNDC1-201ENST00000369592 HSPA9P38646 679 aaKnown RBP20.72■□□□□ 0.91
SMNDC1-201ENST00000369592 SSR1P43307 286 aaKnown RBP20.72■□□□□ 0.91
SMNDC1-201ENST00000369592 ARRB1P49407 418 aaPredicted RBP20.72■□□□□ 0.91
SMNDC1-201ENST00000369592 RENBPP51606 427 aa20.72■□□□□ 0.91
SMNDC1-201ENST00000369592 PFN3P60673 137 aa20.72■□□□□ 0.91
SMNDC1-201ENST00000369592 AP1S1P61966 158 aa20.72■□□□□ 0.91
SMNDC1-201ENST00000369592 AGERQ15109 404 aa20.72■□□□□ 0.91
SMNDC1-201ENST00000369592 LRRC38Q5VT99 294 aa20.72■□□□□ 0.91
SMNDC1-201ENST00000369592 KCTD6Q8NC69 237 aa20.72■□□□□ 0.91
SMNDC1-201ENST00000369592 ADAMTS14Q8WXS8 1223 aa20.72■□□□□ 0.91
SMNDC1-201ENST00000369592 MAML1Q92585 1016 aa20.72■□□□□ 0.91
SMNDC1-201ENST00000369592 IFT43Q96FT9 208 aa20.72■□□□□ 0.91
SMNDC1-201ENST00000369592 TSGA13Q96PP4 275 aa20.72■□□□□ 0.91
SMNDC1-201ENST00000369592 TMEM121BQ9BXQ6 578 aaPredicted RBP20.72■□□□□ 0.91
SMNDC1-201ENST00000369592 ATP13A3Q9H7F0 1226 aa20.72■□□□□ 0.91
SMNDC1-201ENST00000369592 PCDH12Q9NPG4 1184 aa20.72■□□□□ 0.91
SMNDC1-201ENST00000369592 PCDHB9Q9Y5E1 797 aa20.72■□□□□ 0.91
SMNDC1-201ENST00000369592 ASPMQ8IZT6 3477 aa20.71■□□□□ 0.91
SMNDC1-201ENST00000369592 A6NNZ2 444 aa20.71■□□□□ 0.91
SMNDC1-201ENST00000369592 MMP20O60882 483 aa20.71■□□□□ 0.91
SMNDC1-201ENST00000369592 TRIM16O95361 564 aa20.71■□□□□ 0.91
SMNDC1-201ENST00000369592 MMP12P39900 470 aa20.71■□□□□ 0.91
SMNDC1-201ENST00000369592 GARSP41250 739 aaKnown RBP20.71■□□□□ 0.91
SMNDC1-201ENST00000369592 ELP6Q0PNE2 266 aa20.71■□□□□ 0.91
SMNDC1-201ENST00000369592 SLC10A2Q12908 348 aaPredicted RBP20.71■□□□□ 0.91
SMNDC1-201ENST00000369592 FOXC1Q12948 553 aa20.71■□□□□ 0.91
SMNDC1-201ENST00000369592 TPRG1LQ5T0D9 272 aa20.71■□□□□ 0.91
SMNDC1-201ENST00000369592 Q6ZSR6 202 aa20.71■□□□□ 0.91
SMNDC1-201ENST00000369592 DCP2Q8IU60 420 aaKnown RBP20.71■□□□□ 0.91
SMNDC1-201ENST00000369592 MAP7D3Q8IWC1 876 aa20.71■□□□□ 0.91
SMNDC1-201ENST00000369592 CCDC170Q8IYT3 715 aa20.71■□□□□ 0.91
SMNDC1-201ENST00000369592 ATPAF2Q8N5M1 289 aa20.71■□□□□ 0.91
SMNDC1-201ENST00000369592 PANX2Q96RD6 677 aa20.71■□□□□ 0.91
SMNDC1-201ENST00000369592 NUDCD1Q96RS6 583 aa20.71■□□□□ 0.91
SMNDC1-201ENST00000369592 CALN1Q9BXU9 219 aa20.71■□□□□ 0.91
SMNDC1-201ENST00000369592 CFAP69A5D8W1 941 aa20.7■□□□□ 0.9
SMNDC1-201ENST00000369592 NEMP1O14524 444 aa20.7■□□□□ 0.9
SMNDC1-201ENST00000369592 TNFSF14O43557 240 aa20.7■□□□□ 0.9
SMNDC1-201ENST00000369592 ATXN1LP0C7T5 689 aaKnown RBP20.7■□□□□ 0.9
SMNDC1-201ENST00000369592 GIMD1P0DJR0 217 aa20.7■□□□□ 0.9
SMNDC1-201ENST00000369592 SERPINA4P29622 427 aa20.7■□□□□ 0.9
SMNDC1-201ENST00000369592 SCNN1BP51168 640 aa20.7■□□□□ 0.9
SMNDC1-201ENST00000369592 RALGDSQ12967 914 aa20.7■□□□□ 0.9
SMNDC1-201ENST00000369592 SGCGQ13326 291 aa20.7■□□□□ 0.9
SMNDC1-201ENST00000369592 FZD2Q14332 565 aa20.7■□□□□ 0.9
SMNDC1-201ENST00000369592 RALGPS1Q5JS13 557 aa20.7■□□□□ 0.9
SMNDC1-201ENST00000369592 ALG1LQ6GMV1 187 aa20.7■□□□□ 0.9
SMNDC1-201ENST00000369592 SLC25A45Q8N413 288 aa20.7■□□□□ 0.9
SMNDC1-201ENST00000369592 TP53I13Q8NBR0 393 aaPredicted RBP20.7■□□□□ 0.9
SMNDC1-201ENST00000369592 RNF157Q96PX1 679 aa20.7■□□□□ 0.9
SMNDC1-201ENST00000369592 SCNM1Q9BWG6 230 aa20.7■□□□□ 0.9
SMNDC1-201ENST00000369592 CAAP1Q9H8G2 361 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms