RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 PCDH15Q96QU1 1955 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 A0A1B0GVM2 712 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 E2F8A0AVK6 867 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 LNP1A1A4G5 178 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 ILVBLA1L0T0 632 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 TCAF2A6NFQ2 919 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 ARHGAP42A6NI28 874 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 GOLGA8KD6RF30 607 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 F5H5T6 163 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 TK2O00142 265 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 RHOBTB1O94844 696 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 KAT7O95251 611 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 KCNK5O95279 499 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 PEX11BO96011 259 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 IFNB1P01574 187 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 EPOP01588 193 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 KLKB1P03952 638 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 APODP05090 189 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 VAV1P15498 845 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 SPINK2P20155 84 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 TACR2P21452 398 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 CES1P23141 567 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 CHKAP35790 457 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 NOVA1P51513 510 aaKnown RBP8.92□□□□□ -0.98
SNX27-201ENST00000368838 LIMK1P53667 647 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 IL10RBQ08334 325 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 STAT4Q14765 748 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 CRY1Q16526 586 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 HIF1AQ16665 826 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 UAP1L1Q3KQV9 507 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 USP39Q53GS9 565 aaKnown RBP8.92□□□□□ -0.98
SNX27-201ENST00000368838 RALGPS1Q5JS13 557 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 KCTD11Q693B1 232 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 NADSYN1Q6IA69 706 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 ADGRD1Q6QNK2 874 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 TMEFF1Q8IYR6 380 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 GOLGA6L1Q8N7Z2 621 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 IL17RCQ8NAC3 791 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 TSEN2Q8NCE0 465 aaKnown RBP8.92□□□□□ -0.98
SNX27-201ENST00000368838 BHMTQ93088 406 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 TADA1Q96BN2 335 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 FCRL5Q96RD9 977 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 PRR14Q9BWN1 585 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 TRIM31Q9BZY9 425 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 NACA2Q9H009 215 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 NOL6Q9H6R4 1146 aaKnown RBP8.92□□□□□ -0.98
SNX27-201ENST00000368838 HAUS2Q9NVX0 235 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 SH3BP1Q9Y3L3 701 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 GPSM3Q9Y4H4 160 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 PCDHGA5Q9Y5G8 931 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 CKAP5Q14008 2032 aa8.92□□□□□ -0.98
SNX27-201ENST00000368838 CHD5Q8TDI0 1954 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 NYNRINQ9P2P1 1898 aaKnown RBP8.91□□□□□ -0.98
SNX27-201ENST00000368838 SYNJ2BP-COX16A0A087WUM0 186 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 TCRBV21S2A2A0A5A6 115 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 MAGEB16A2A368 324 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 GOLGA6CA6NDK9 693 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 HMGB1P1B2RPK0 211 aaPredicted RBP8.91□□□□□ -0.98
SNX27-201ENST00000368838 E7EVH7 732 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 RNF103O00237 685 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 SLC9A3R1O14745 358 aaPredicted RBP8.91□□□□□ -0.98
SNX27-201ENST00000368838 FOXD2O60548 495 aaPredicted RBP8.91□□□□□ -0.98
SNX27-201ENST00000368838 ADAM23O75077 832 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 TMEM63AO94886 807 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 SYF2O95926 243 aaKnown RBP8.91□□□□□ -0.98
SNX27-201ENST00000368838 TOP3BO95985 862 aaKnown RBP8.91□□□□□ -0.98
SNX27-201ENST00000368838 ADH1CP00326 375 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 ZSCAN5DPP0CG00 497 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 GOLGA6DP0CG33 693 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 PTPN3P26045 913 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 PTGER3P43115 390 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 MAGEA4P43358 317 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 MMP13P45452 471 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 MAPK8P45983 427 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 RENBPP51606 427 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 PLK1P53350 603 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 EMP3P54852 163 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 IRX4P78413 519 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 MRPS21P82921 87 aaKnown RBP8.91□□□□□ -0.98
SNX27-201ENST00000368838 FOXC1Q12948 553 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 SERINC3Q13530 473 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 SLC12A1Q13621 1099 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 CCDC38Q502W7 563 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 HSP90B2PQ58FF3 399 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 C6orf118Q5T5N4 469 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 AGBL2Q5U5Z8 902 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 PMS2CLQ68D20 193 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 LRRC8BQ6P9F7 803 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 ARHGEF18Q6ZSZ5 1173 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 CYP2U1Q7Z449 544 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 C14orf80Q86SX3 495 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 LINC00523Q86TU6 105 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 RASSF3Q86WH2 238 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 TMEM25Q86YD3 366 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 MIB1Q86YT6 1006 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 GSPT2Q8IYD1 628 aaKnown RBP8.91□□□□□ -0.98
SNX27-201ENST00000368838 ZNF567Q8N184 647 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 SERPINB12Q96P63 405 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 ZIM3Q96PE6 472 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms