RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 CCL22O00626 93 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 MAFKO60675 156 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 ABLIM3O94929 683 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 PRKCGP05129 697 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 DLDP09622 509 aaKnown RBP10.76□□□□□ -0.69
TPM3-212ENST00000368533 ERVK-10P10266 1014 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 NTHL1P78549 312 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 SMAD3P84022 425 aaKnown RBP10.76□□□□□ -0.69
TPM3-212ENST00000368533 POU6F1Q14863 301 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 TEX44Q53QW1 395 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 ARTNQ5T4W7 220 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 LINGO4Q6UY18 593 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 TPGS1Q6ZTW0 290 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 DDX53Q86TM3 631 aaKnown RBP10.76□□□□□ -0.69
TPM3-212ENST00000368533 ARHGAP18Q8N392 663 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 RTL3Q8N8U3 475 aaKnown RBP10.76□□□□□ -0.69
TPM3-212ENST00000368533 ERLEC1Q96DZ1 483 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 BTN2A3PQ96KV6 586 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 FERMT1Q9BQL6 677 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 TUBB6Q9BUF5 446 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 TRIM62Q9BVG3 475 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 FRMD8Q9BZ67 464 aaPredicted RBP10.76□□□□□ -0.69
TPM3-212ENST00000368533 ZYG11BQ9C0D3 744 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 SP110Q9HB58 689 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 BACE2Q9Y5Z0 518 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 A0A0U1RQS6 177 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 TXNDC9O14530 226 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 BUD23O43709 281 aaKnown RBP10.76□□□□□ -0.69
TPM3-212ENST00000368533 C8AP07357 584 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 PIRTP0C851 137 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 TACR2P21452 398 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 RFC2P35250 354 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 AIF1P55008 147 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 HPCAP84074 193 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 STX3Q13277 289 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 IL31Q6EBC2 164 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 PAOXQ6QHF9 649 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 CMTR2Q8IYT2 770 aaKnown RBP10.76□□□□□ -0.69
TPM3-212ENST00000368533 POF1BQ8WVV4 589 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 MFSD3Q96ES6 412 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 SPATA17Q96L03 361 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 SIGLEC10Q96LC7 697 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 KCNK13Q9HB14 408 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 INIPQ9NRY2 104 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 CDH22Q9UJ99 828 aa10.76□□□□□ -0.69
TPM3-212ENST00000368533 GOLGA8CPA6NN73 597 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 HACD1B0YJ81 288 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 CAPN15O75808 1086 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 LMNAP02545 664 aaKnown RBP10.75□□□□□ -0.69
TPM3-212ENST00000368533 DHRS4L1P0CG22 281 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 BMP1P13497 986 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 ZNF24P17028 368 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 MX2P20592 715 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 VARSP26640 1264 aaKnown RBP10.75□□□□□ -0.69
TPM3-212ENST00000368533 HARS2P49590 506 aaKnown RBP10.75□□□□□ -0.69
TPM3-212ENST00000368533 ADARP55265 1226 aaKnown RBP10.75□□□□□ -0.69
TPM3-212ENST00000368533 SEMA5AQ13591 1074 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 CBX2Q14781 532 aaPredicted RBP10.75□□□□□ -0.69
TPM3-212ENST00000368533 CTC1Q2NKJ3 1217 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 MANEALQ5VSG8 457 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 TMEM150AQ86TG1 271 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 HERC6Q8IVU3 1022 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 SCML4Q8N228 414 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 ZSCAN18Q8TBC5 510 aaPredicted RBP10.75□□□□□ -0.69
TPM3-212ENST00000368533 HDAC11Q96DB2 347 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 SMIM14Q96QK8 99 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 CHRAC1Q9NRG0 131 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 TAS2R1Q9NYW7 299 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 ZNF180Q9UJW8 692 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 FNDC3AQ9Y2H6 1198 aaKnown RBP10.75□□□□□ -0.69
TPM3-212ENST00000368533 NYNRINQ9P2P1 1898 aaKnown RBP10.75□□□□□ -0.69
TPM3-212ENST00000368533 MYOCOSA0A1B0GUC4 107 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 FAM92AA1XBS5 289 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 ZNF487B1APH4 448 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 F5H5T6 163 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 HNRNPCL1O60812 293 aaKnown RBP10.75□□□□□ -0.69
TPM3-212ENST00000368533 RFPL1O75677 317 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 STC2O76061 302 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 EFEMP2O95967 443 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 HDCP19113 662 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 SAT1P21673 171 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 EPHB3P54753 998 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 DSC2Q02487 901 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 SEPT6Q14141 434 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 MAP7Q14244 749 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 POLD3Q15054 466 aaPredicted RBP10.75□□□□□ -0.69
TPM3-212ENST00000368533 MSANTD2Q6P1R3 559 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 RAPH1Q70E73 1250 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 GAREM2Q75VX8 874 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 CFAP61Q8NHU2 1237 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 ING5Q8WYH8 240 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 CDKL2Q92772 493 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 TCEAL4Q96EI5 215 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 SIKE1Q9BRV8 207 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 FICDQ9BVA6 458 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 IL37Q9NZH6 218 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 STX18Q9P2W9 335 aaKnown RBP10.75□□□□□ -0.69
TPM3-212ENST00000368533 INSL6Q9Y581 213 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 CPQQ9Y646 472 aa10.75□□□□□ -0.69
TPM3-212ENST00000368533 LRG1P02750 347 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms