RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 HLA-FP30511 346 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 ACSL1P33121 698 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 CSNK1EP49674 416 aaKnown RBP10.13□□□□□ -0.79
TPM3-210ENST00000368530 CXCR3P49682 368 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 IFFO1Q0D2I5 559 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 SLC10A2Q12908 348 aaPredicted RBP10.13□□□□□ -0.79
TPM3-210ENST00000368530 SLMAPQ14BN4 828 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 PTPRNQ16849 979 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 SKIDA1Q1XH10 827 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 COL28A1Q2UY09 1125 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 ARL13BQ3SXY8 428 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 TTMPQ5BVD1 217 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 HIBCHQ6NVY1 386 aaPredicted RBP10.13□□□□□ -0.79
TPM3-210ENST00000368530 LRIG3Q6UXM1 1119 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 TADA2BQ86TJ2 420 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 ADIPOR2Q86V24 386 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 MARCH9Q86YJ5 346 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 PSTKQ8IV42 348 aaKnown RBP10.13□□□□□ -0.79
TPM3-210ENST00000368530 OR2T3Q8NH03 318 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 UCMAQ8WVF2 138 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 NTAN1Q96AB6 310 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 PGAP3Q96FM1 320 aaPredicted RBP10.13□□□□□ -0.79
TPM3-210ENST00000368530 CDK5RAP1Q96SZ6 601 aaKnown RBP10.13□□□□□ -0.79
TPM3-210ENST00000368530 SH3GL2Q99962 352 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 TRIM62Q9BVG3 475 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 PCED1AQ9H1Q7 454 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 EPB41L4BQ9H329 900 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 CENPHQ9H3R5 247 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 CCDC86Q9H6F5 360 aaKnown RBP10.13□□□□□ -0.79
TPM3-210ENST00000368530 C6orf106Q9H6K1 298 aaPredicted RBP10.13□□□□□ -0.79
TPM3-210ENST00000368530 LRRC4CQ9HCJ2 640 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 ABCC13Q9NSE7 274 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 DKK4Q9UBT3 224 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 APC2O95996 2303 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 SLC12A8A0AV02 714 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 C10orf142B7Z368 130 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 MOCS2O96007 188 aaPredicted RBP10.12□□□□□ -0.79
TPM3-210ENST00000368530 SHBGP04278 402 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 EPHX1P07099 455 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 TPI1P60174 286 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 BASP1P80723 227 aaKnown RBP10.12□□□□□ -0.79
TPM3-210ENST00000368530 ZNF844Q08AG5 666 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 KIF19Q2TAC6 998 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 HP1BP3Q5SSJ5 553 aaPredicted RBP10.12□□□□□ -0.79
TPM3-210ENST00000368530 RNASEH2BQ5TBB1 312 aaKnown RBP10.12□□□□□ -0.79
TPM3-210ENST00000368530 ANKRD22Q5VYY1 191 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 DENND2CQ68D51 928 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 IL27RAQ6UWB1 636 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 RFX8Q6ZV50 586 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 PDZD3Q86UT5 571 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 CDKL3Q8IVW4 592 aaPredicted RBP10.12□□□□□ -0.79
TPM3-210ENST00000368530 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.12□□□□□ -0.79
TPM3-210ENST00000368530 SETD7Q8WTS6 366 aaKnown RBP10.12□□□□□ -0.79
TPM3-210ENST00000368530 BBC3Q96PG8 261 aaPredicted RBP10.12□□□□□ -0.79
TPM3-210ENST00000368530 CIPCQ9C0C6 399 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 SIK2Q9H0K1 926 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 PABPC3Q9H361 631 aaKnown RBP10.12□□□□□ -0.79
TPM3-210ENST00000368530 CDC42EP4Q9H3Q1 356 aaKnown RBP10.12□□□□□ -0.79
TPM3-210ENST00000368530 USP29Q9HBJ7 922 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 DTLQ9NZJ0 730 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 RCOR3Q9P2K3 495 aaPredicted RBP10.12□□□□□ -0.79
TPM3-210ENST00000368530 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.12□□□□□ -0.79
TPM3-210ENST00000368530 SNX11Q9Y5W9 270 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 NFS1Q9Y697 457 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 KNL1Q8NG31 2342 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 CKAP5Q14008 2032 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 TCRBV7S3A2A0A539 114 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 GOLGA6L10A6NI86 522 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 SMIM23A6NLE4 172 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 GOLGA8KD6RF30 607 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 FLRT2O43155 660 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 IRAK2O43187 625 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 RIPK2O43353 540 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 TSPAN3O60637 253 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 ACSL3O95573 720 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 CER1O95813 267 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 IGLV3-25P01717 112 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 STIP1P31948 543 aaKnown RBP10.12□□□□□ -0.79
TPM3-210ENST00000368530 SGSHP51688 502 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 AIF1P55008 147 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 DPYSQ14117 519 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 SLC29A2Q14542 456 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 MPPE1Q53F39 396 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 SLC45A4Q5BKX6 768 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 FAXCQ5TGI0 409 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 KCTD16Q68DU8 428 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 SERPINA13PQ6UXR4 307 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 FAM124AQ86V42 546 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 CACUL1Q86Y37 369 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 TP53INP2Q8IXH6 220 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 PPIL6Q8IXY8 311 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 ARHGAP18Q8N392 663 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 ZNF366Q8N895 744 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 CCDC110Q8TBZ0 833 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 RHBDD1Q8TEB9 315 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 DDI1Q8WTU0 396 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 CPT1BQ92523 772 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 PLD4Q96BZ4 506 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 BIRC7Q96CA5 298 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 MYO19Q96H55 970 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms