RNA–Protein interactions for RNA: ENST00000368407.7

EFNA1-202, Transcript of ephrin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-202ENST00000368407 SYPL2Q5VXT5 272 aa26.78■■□□□ 1.88
EFNA1-202ENST00000368407 LPCAT4Q643R3 524 aa26.78■■□□□ 1.88
EFNA1-202ENST00000368407 SETD3Q86TU7 594 aaPredicted RBP26.78■■□□□ 1.88
EFNA1-202ENST00000368407 CENPIQ92674 756 aaPredicted RBP26.78■■□□□ 1.88
EFNA1-202ENST00000368407 ZFRQ96KR1 1074 aaKnown RBP26.78■■□□□ 1.88
EFNA1-202ENST00000368407 ZNF334Q9HCZ1 680 aaPredicted RBP26.78■■□□□ 1.88
EFNA1-202ENST00000368407 COMMD8Q9NX08 183 aa26.78■■□□□ 1.88
EFNA1-202ENST00000368407 PRRC2BQ5JSZ5 2229 aaKnown RBP26.78■■□□□ 1.88
EFNA1-202ENST00000368407 GREB1Q4ZG55 1949 aa26.77■■□□□ 1.88
EFNA1-202ENST00000368407 CREB3O43889 395 aa26.77■■□□□ 1.88
EFNA1-202ENST00000368407 VAV1P15498 845 aa26.77■■□□□ 1.88
EFNA1-202ENST00000368407 GP5P40197 560 aa26.77■■□□□ 1.88
EFNA1-202ENST00000368407 EPHB1P54762 984 aa26.77■■□□□ 1.88
EFNA1-202ENST00000368407 HYAL1Q12794 435 aa26.77■■□□□ 1.88
EFNA1-202ENST00000368407 ADGRE1Q14246 886 aa26.77■■□□□ 1.88
EFNA1-202ENST00000368407 CDO1Q16878 200 aa26.77■■□□□ 1.88
EFNA1-202ENST00000368407 RAB6CQ53S08 254 aa26.77■■□□□ 1.88
EFNA1-202ENST00000368407 MON1AQ86VX9 555 aa26.77■■□□□ 1.88
EFNA1-202ENST00000368407 C10orf107Q8IVU9 208 aa26.77■■□□□ 1.88
EFNA1-202ENST00000368407 POU5F2Q8N7G0 328 aa26.77■■□□□ 1.88
EFNA1-202ENST00000368407 RNF217Q8TC41 542 aa26.77■■□□□ 1.88
EFNA1-202ENST00000368407 SREK1Q8WXA9 508 aaKnown RBP26.77■■□□□ 1.88
EFNA1-202ENST00000368407 MYRFLQ96LU7 910 aa26.77■■□□□ 1.88
EFNA1-202ENST00000368407 CPNE1Q99829 537 aa26.77■■□□□ 1.88
EFNA1-202ENST00000368407 RAB6CQ9H0N0 254 aa26.77■■□□□ 1.88
EFNA1-202ENST00000368407 CDH19Q9H159 772 aa26.77■■□□□ 1.88
EFNA1-202ENST00000368407 DTNAQ9Y4J8 743 aa26.77■■□□□ 1.88
EFNA1-202ENST00000368407 DAB1O75553 588 aa26.77■■□□□ 1.88
EFNA1-202ENST00000368407 CAPNS1P04632 268 aa26.77■■□□□ 1.88
EFNA1-202ENST00000368407 TFE3P19532 575 aaPredicted RBP26.77■■□□□ 1.88
EFNA1-202ENST00000368407 GRIA2P42262 883 aa26.77■■□□□ 1.88
EFNA1-202ENST00000368407 RPL5P46777 297 aaKnown RBP26.77■■□□□ 1.88
EFNA1-202ENST00000368407 HSPA13P48723 471 aa26.77■■□□□ 1.88
EFNA1-202ENST00000368407 DLG1Q12959 904 aa26.77■■□□□ 1.88
EFNA1-202ENST00000368407 LRRC23Q53EV4 343 aaPredicted RBP26.77■■□□□ 1.88
EFNA1-202ENST00000368407 DCAF6Q58WW2 860 aa26.77■■□□□ 1.88
EFNA1-202ENST00000368407 SCYL2Q6P3W7 929 aa26.77■■□□□ 1.88
EFNA1-202ENST00000368407 PQLC1Q8N2U9 271 aa26.77■■□□□ 1.88
EFNA1-202ENST00000368407 B4GALNT2Q8NHY0 566 aa26.77■■□□□ 1.88
EFNA1-202ENST00000368407 FAM81AQ8TBF8 368 aa26.77■■□□□ 1.88
EFNA1-202ENST00000368407 SLC2A13Q96QE2 648 aa26.77■■□□□ 1.88
EFNA1-202ENST00000368407 CDCA3Q99618 268 aaPredicted RBP26.77■■□□□ 1.88
EFNA1-202ENST00000368407 MID2Q9UJV3 735 aa26.77■■□□□ 1.88
EFNA1-202ENST00000368407 SMIM18P0DKX4 95 aa26.76■■□□□ 1.87
EFNA1-202ENST00000368407 NCAM1P13591 858 aa26.76■■□□□ 1.87
EFNA1-202ENST00000368407 KCNA4P22459 653 aa26.76■■□□□ 1.87
EFNA1-202ENST00000368407 HDAC4P56524 1084 aa26.76■■□□□ 1.87
EFNA1-202ENST00000368407 PITX1P78337 314 aaPredicted RBP26.76■■□□□ 1.87
EFNA1-202ENST00000368407 KLF10Q13118 480 aa26.76■■□□□ 1.87
EFNA1-202ENST00000368407 CA9Q16790 459 aa26.76■■□□□ 1.87
EFNA1-202ENST00000368407 SPANXN3Q5MJ09 141 aa26.76■■□□□ 1.87
EFNA1-202ENST00000368407 C16orf46Q6P387 395 aa26.76■■□□□ 1.87
EFNA1-202ENST00000368407 C16orf89Q6UX73 402 aa26.76■■□□□ 1.87
EFNA1-202ENST00000368407 ITIH5Q86UX2 942 aa26.76■■□□□ 1.87
EFNA1-202ENST00000368407 SPATA24Q86W54 205 aa26.76■■□□□ 1.87
EFNA1-202ENST00000368407 HS6ST3Q8IZP7 471 aa26.76■■□□□ 1.87
EFNA1-202ENST00000368407 TRMT2BQ96GJ1 504 aaKnown RBP26.76■■□□□ 1.87
EFNA1-202ENST00000368407 PRICKLE1Q96MT3 831 aaPredicted RBP26.76■■□□□ 1.87
EFNA1-202ENST00000368407 PNPOQ9NVS9 261 aa26.76■■□□□ 1.87
EFNA1-202ENST00000368407 GPATCH2LQ9NWQ4 482 aa26.76■■□□□ 1.87
EFNA1-202ENST00000368407 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.76■■□□□ 1.87
EFNA1-202ENST00000368407 C15orf38-AP3S2A0A0A6YYH1 394 aa26.75■■□□□ 1.87
EFNA1-202ENST00000368407 CPA3P15088 417 aa26.75■■□□□ 1.87
EFNA1-202ENST00000368407 SERPINB6P35237 376 aa26.75■■□□□ 1.87
EFNA1-202ENST00000368407 MATKP42679 507 aa26.75■■□□□ 1.87
EFNA1-202ENST00000368407 PRKAA2P54646 552 aa26.75■■□□□ 1.87
EFNA1-202ENST00000368407 FOLH1Q04609 750 aa26.75■■□□□ 1.87
EFNA1-202ENST00000368407 FRMD7Q6ZUT3 714 aa26.75■■□□□ 1.87
EFNA1-202ENST00000368407 ARPINQ7Z6K5 226 aa26.75■■□□□ 1.87
EFNA1-202ENST00000368407 PSTKQ8IV42 348 aaKnown RBP26.75■■□□□ 1.87
EFNA1-202ENST00000368407 AHI1Q8N157 1196 aa26.75■■□□□ 1.87
EFNA1-202ENST00000368407 HTR3CQ8WXA8 447 aa26.75■■□□□ 1.87
EFNA1-202ENST00000368407 ZNF512Q96ME7 567 aaPredicted RBP26.75■■□□□ 1.87
EFNA1-202ENST00000368407 NUDT5Q9UKK9 219 aa26.75■■□□□ 1.87
EFNA1-202ENST00000368407 PADI4Q9UM07 663 aa26.75■■□□□ 1.87
EFNA1-202ENST00000368407 MTCL1Q9Y4B5 1905 aaKnown RBP26.75■■□□□ 1.87
EFNA1-202ENST00000368407 LINC01565O15544 149 aa26.75■■□□□ 1.87
EFNA1-202ENST00000368407 PDE5AO76074 875 aa26.75■■□□□ 1.87
EFNA1-202ENST00000368407 GLP2RO95838 553 aa26.75■■□□□ 1.87
EFNA1-202ENST00000368407 THRAP10827 490 aa26.75■■□□□ 1.87
EFNA1-202ENST00000368407 GLDCP23378 1020 aa26.75■■□□□ 1.87
EFNA1-202ENST00000368407 TMEM259Q4ZIN3 620 aa26.75■■□□□ 1.87
EFNA1-202ENST00000368407 RTL10Q7L3V2 364 aa26.75■■□□□ 1.87
EFNA1-202ENST00000368407 C12orf76Q8N812 135 aaPredicted RBP26.75■■□□□ 1.87
EFNA1-202ENST00000368407 FERMT1Q9BQL6 677 aa26.75■■□□□ 1.87
EFNA1-202ENST00000368407 ZNF696Q9H7X3 374 aa26.75■■□□□ 1.87
EFNA1-202ENST00000368407 HCFC1R1Q9NWW0 138 aa26.75■■□□□ 1.87
EFNA1-202ENST00000368407 MTCH2Q9Y6C9 303 aa26.75■■□□□ 1.87
EFNA1-202ENST00000368407 ZNF638Q14966 1978 aaKnown RBP26.74■■□□□ 1.87
EFNA1-202ENST00000368407 MYO16Q9Y6X6 1858 aa26.74■■□□□ 1.87
EFNA1-202ENST00000368407 TOP3BO95985 862 aaKnown RBP26.74■■□□□ 1.87
EFNA1-202ENST00000368407 ZDHHC11BP0C7U3 371 aa26.74■■□□□ 1.87
EFNA1-202ENST00000368407 SERPINB8P50452 374 aa26.74■■□□□ 1.87
EFNA1-202ENST00000368407 GBE1Q04446 702 aa26.74■■□□□ 1.87
EFNA1-202ENST00000368407 SLC10A2Q12908 348 aaPredicted RBP26.74■■□□□ 1.87
EFNA1-202ENST00000368407 SH2D4BQ5SQS7 431 aa26.74■■□□□ 1.87
EFNA1-202ENST00000368407 RARS2Q5T160 578 aaKnown RBP26.74■■□□□ 1.87
EFNA1-202ENST00000368407 BTBD8Q5XKL5 378 aa26.74■■□□□ 1.87
EFNA1-202ENST00000368407 BORAQ6PGQ7 559 aa26.74■■□□□ 1.87
EFNA1-202ENST00000368407 LCA5Q86VQ0 697 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms