RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 C3orf70A6NLC5 250 aaPredicted RBP9.95□□□□□ -0.82
CD48-202ENST00000368046 H0Y8X5 98 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 MUSKO15146 869 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 SPOPO43791 374 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 SH3BP5O60239 455 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 PIGNO95427 931 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 ZFXP17010 805 aaPredicted RBP9.95□□□□□ -0.82
CD48-202ENST00000368046 ITIH2P19823 946 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 MX2P20592 715 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 COMTP21964 271 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 HNRNPA2B1P22626 353 aaKnown RBP9.95□□□□□ -0.82
CD48-202ENST00000368046 XPAP23025 273 aaPredicted RBP9.95□□□□□ -0.82
CD48-202ENST00000368046 CES1P23141 567 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 SERPINA4P29622 427 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 GARSP41250 739 aaKnown RBP9.95□□□□□ -0.82
CD48-202ENST00000368046 ABL2P42684 1182 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 NXPH1P58417 271 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 ELP6Q0PNE2 266 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 GALNT2Q10471 571 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 SLC10A2Q12908 348 aaPredicted RBP9.95□□□□□ -0.82
CD48-202ENST00000368046 ZNF235Q14590 738 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 TMEM52BQ4KMG9 183 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 ODF2Q5BJF6 829 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 RALGPS1Q5JS13 557 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 PRAMEF14Q5SWL7 426 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 SEL1L3Q68CR1 1132 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 BRAT1Q6PJG6 821 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 LAYNQ6UX15 382 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 RAD9BQ6WBX8 426 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 DCP2Q8IU60 420 aaKnown RBP9.95□□□□□ -0.82
CD48-202ENST00000368046 TEX26Q8N6G2 289 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 TMEM145Q8NBT3 493 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 FATE1Q969F0 183 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 BMFQ96LC9 184 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 NUDCD1Q96RS6 583 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 ELF4Q99607 663 aaPredicted RBP9.95□□□□□ -0.82
CD48-202ENST00000368046 GDF3Q9NR23 364 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 KLHL11Q9NVR0 708 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 HYOU1Q9Y4L1 999 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 GON4LQ3T8J9 2241 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 CEP192Q8TEP8 1941 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 A0A1B0GTQ1 180 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 A0A1W2PQ67 120 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 MED19A0JLT2 244 aaPredicted RBP9.94□□□□□ -0.82
CD48-202ENST00000368046 TSPAN11A1L157 253 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 CFAP69A5D8W1 941 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 BTNL10A8MVZ5 291 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 TRAFD1O14545 582 aaPredicted RBP9.94□□□□□ -0.82
CD48-202ENST00000368046 PCDHGA12O60330 932 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 MMP20O60882 483 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 TM7SF2O76062 418 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 ZRANB2O95218 330 aaKnown RBP eCLIP9.94□□□□□ -0.82
CD48-202ENST00000368046 THEGLP0DJG4 465 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 TNNT1P13805 278 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 PRLRP16471 622 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 CR2P20023 1033 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 MMP13P45452 471 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 RXRGP48443 463 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 NOVA1P51513 510 aaKnown RBP9.94□□□□□ -0.82
CD48-202ENST00000368046 AP1S1P61966 158 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 CFAP58Q5T655 872 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 N4BP2L1Q5TBK1 243 aaPredicted RBP9.94□□□□□ -0.82
CD48-202ENST00000368046 SLC9A4Q6AI14 798 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 TIGD7Q6NT04 549 aaPredicted RBP9.94□□□□□ -0.82
CD48-202ENST00000368046 PSAPL1Q6NUJ1 521 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 ABI3BPQ7Z7G0 1075 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 PGBD5Q8N414 524 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 OXR1Q8N573 874 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 SPC24Q8NBT2 197 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 CCNYQ8ND76 341 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 DEFB124Q8NES8 71 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.94□□□□□ -0.82
CD48-202ENST00000368046 CXorf40AQ8TE69 158 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 RHBDD1Q8TEB9 315 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 MAML1Q92585 1016 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 ECHDC3Q96DC8 303 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 NSMCE3Q96MG7 304 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 DTLQ9NZJ0 730 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 AMACRQ9UHK6 382 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 TSR3Q9UJK0 312 aaKnown RBP9.94□□□□□ -0.82
CD48-202ENST00000368046 TFR2Q9UP52 801 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 FNDC3AQ9Y2H6 1198 aaKnown RBP9.94□□□□□ -0.82
CD48-202ENST00000368046 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.94□□□□□ -0.82
CD48-202ENST00000368046 PCDHB9Q9Y5E1 797 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 DUSP10Q9Y6W6 482 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 CHD5Q8TDI0 1954 aa9.94□□□□□ -0.82
CD48-202ENST00000368046 TTC24A2A3L6 582 aaPredicted RBP9.93□□□□□ -0.82
CD48-202ENST00000368046 RCCD1A6NED2 376 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 GOLGA6L6A8MZA4 724 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 FPGTO14772 594 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 GIPC1O14908 333 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 FLRT2O43155 660 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 PJA2O43164 708 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 SPINT1O43278 529 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 HTRA2O43464 458 aaPredicted RBP9.93□□□□□ -0.82
CD48-202ENST00000368046 PSTPIP1O43586 416 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 MFSD11O43934 449 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 MAP3K6O95382 1288 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 KRT1P04264 644 aa9.93□□□□□ -0.82
CD48-202ENST00000368046 ADRB1P08588 477 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms