RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 PGAP2Q9UHJ9 254 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 KDM6BO15054 1643 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 SGTAO43765 313 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 SLC15A1P46059 708 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 KIF19Q2TAC6 998 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 PDXDC2PQ6P474 469 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 TIFABQ6ZNK6 161 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 ADAMTSL2Q86TH1 951 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 ITIH5Q86UX2 942 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 RASGEF1CQ8N431 466 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 SIMC1Q8NDZ2 872 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 PIGSQ96S52 555 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 SLC4A5Q9BY07 1137 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 COX16Q9P0S2 106 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 ZC3H7BQ9UGR2 993 aaKnown RBP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 HSPB11Q9Y547 144 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 TCIRG1Q13488 830 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 PROX2Q3B8N5 592 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 FAM162BQ5T6X4 162 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 NAPRTQ6XQN6 538 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 LFNGQ8NES3 379 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 AKT1S1Q96B36 256 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 MYLK2Q9H1R3 596 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 GPN2Q9H9Y4 310 aaPredicted RBP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 GSTA4O15217 222 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 WEE1P30291 646 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 PRKG2Q13237 762 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 ZBTB6Q15916 424 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 GGA3Q9NZ52 723 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 DCTN4Q9UJW0 460 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 MEN1O00255 615 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 HOXC11O43248 304 aaPredicted RBP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 ABL1P00519 1130 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 CLPPQ16740 277 aaPredicted RBP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 ARHGAP36Q6ZRI8 547 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 USP43Q70EL4 1123 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 TXNDC5Q8NBS9 432 aaKnown RBP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 PRELID3BQ9Y3B1 194 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 RNF17Q9BXT8 1623 aaKnown RBP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 PSKH1P11801 424 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 ALDH1B1P30837 517 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 MSX2P35548 267 aaPredicted RBP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 RPL6Q02878 288 aaKnown RBP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 TLR1Q15399 786 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 PLEKHG4Q58EX7 1191 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 FAAH2Q6GMR7 532 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 IQCF2Q8IXL9 164 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 ELAC1Q9H777 363 aaKnown RBP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 LRRC4Q9HBW1 653 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 RAB9BQ9NP90 201 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 NOD1Q9Y239 953 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 PCDHGB7Q9Y5F8 929 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 ASMTLO95671 621 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 TSPAN19P0C672 248 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 RRM2BQ7LG56 351 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 COMMD1Q8N668 190 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 SPDYE1Q8NFV5 336 aaPredicted RBP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 C1orf54Q8WWF1 131 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 CNOT6LQ96LI5 555 aaKnown RBP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 UNC93B1Q9H1C4 597 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 PRMT7Q9NVM4 692 aaPredicted RBP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 OR14I1A6ND48 311 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 MAGEA2P43356 314 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 GNPDA1P46926 289 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 STT3AP46977 705 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 RANP62826 216 aaKnown RBP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 TNK2Q07912 1038 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 DBPQ10586 325 aaPredicted RBP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 MFSD6LQ8IWD5 586 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 RELTQ969Z4 430 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 ANKRA2Q9H9E1 313 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 IMPAD1Q9NX62 359 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 PCDHA6Q9UN73 950 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 ZBTB5O15062 677 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 ATP12AP54707 1039 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 CD47Q08722 323 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 PQLC1Q8N2U9 271 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 OXNAD1Q96HP4 312 aaPredicted RBP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 PHF12Q96QT6 1004 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 CLMPQ9H6B4 373 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 JMJD4Q9H9V9 463 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 MAP1BP46821 2468 aaKnown RBP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 TECP42680 631 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 SLC1A4P43007 532 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 USP46P62068 366 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 FAM131AQ6UXB0 335 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 DENND5BQ6ZUT9 1274 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 RASAL3Q86YV0 1011 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 LACC1Q8IV20 430 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 NXPE2Q96DL1 559 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 HYLS1Q96M11 299 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 POLR2J2Q9GZM3 115 aaKnown RBP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 POLR2J3Q9H1A7 115 aaKnown RBP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 SLA2Q9H6Q3 261 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 DPP3Q9NY33 737 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 EIF3LQ9Y262 564 aaKnown RBP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 FRMPD1Q5SYB0 1578 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 PCSK1P29120 753 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 MESDQ14696 234 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms