RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 CCDC150Q8NCX0 1101 aa8.6□□□□□ -1.03
HMGB1P39-201ENST00000366304 OR7D4Q8NG98 312 aa8.6□□□□□ -1.03
HMGB1P39-201ENST00000366304 CCL4L1Q8NHW4 92 aa8.6□□□□□ -1.03
HMGB1P39-201ENST00000366304 EPS8L1Q8TE68 723 aa8.6□□□□□ -1.03
HMGB1P39-201ENST00000366304 ART4Q93070 314 aa8.6□□□□□ -1.03
HMGB1P39-201ENST00000366304 FAM149B1Q96BN6 582 aa8.6□□□□□ -1.03
HMGB1P39-201ENST00000366304 PDXPQ96GD0 296 aa8.6□□□□□ -1.03
HMGB1P39-201ENST00000366304 PAGE5Q96GU1 130 aa8.6□□□□□ -1.03
HMGB1P39-201ENST00000366304 HSFY1Q96LI6 401 aa8.6□□□□□ -1.03
HMGB1P39-201ENST00000366304 CCDC74BQ96LY2 380 aa8.6□□□□□ -1.03
HMGB1P39-201ENST00000366304 CATSPER2Q96P56 530 aa8.6□□□□□ -1.03
HMGB1P39-201ENST00000366304 TAAR9Q96RI9 348 aa8.6□□□□□ -1.03
HMGB1P39-201ENST00000366304 DNAI2Q9GZS0 605 aa8.6□□□□□ -1.03
HMGB1P39-201ENST00000366304 MUC3BQ9H195 1237 aa8.6□□□□□ -1.03
HMGB1P39-201ENST00000366304 OCIAD1Q9NX40 245 aa8.6□□□□□ -1.03
HMGB1P39-201ENST00000366304 COX16Q9P0S2 106 aa8.6□□□□□ -1.03
HMGB1P39-201ENST00000366304 TMEM9Q9P0T7 183 aa8.6□□□□□ -1.03
HMGB1P39-201ENST00000366304 GMPR2Q9P2T1 348 aaKnown RBP8.6□□□□□ -1.03
HMGB1P39-201ENST00000366304 LRIT1Q9P2V4 623 aa8.6□□□□□ -1.03
HMGB1P39-201ENST00000366304 SERTAD1Q9UHV2 236 aa8.6□□□□□ -1.03
HMGB1P39-201ENST00000366304 FKBPLQ9UIM3 349 aa8.6□□□□□ -1.03
HMGB1P39-201ENST00000366304 MAPK8IP1Q9UQF2 711 aa8.6□□□□□ -1.03
HMGB1P39-201ENST00000366304 MTMR6Q9Y217 621 aa8.6□□□□□ -1.03
HMGB1P39-201ENST00000366304 PCDHGA3Q9Y5H0 932 aa8.6□□□□□ -1.03
HMGB1P39-201ENST00000366304 MRPS18BQ9Y676 258 aaKnown RBP8.6□□□□□ -1.03
HMGB1P39-201ENST00000366304 FBN3Q75N90 2809 aa8.6□□□□□ -1.03
HMGB1P39-201ENST00000366304 UNC13CQ8NB66 2214 aa8.6□□□□□ -1.03
HMGB1P39-201ENST00000366304 AREL1O15033 823 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 TSPAN6O43657 245 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 PAGE1O75459 146 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 FURINP09958 794 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 KRT13P13646 458 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 GLB1P16278 677 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 F8A1P23610 371 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 MPSTP25325 297 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 CD1CP29017 333 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 PSMC2P35998 433 aaKnown RBP8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 GPD2P43304 727 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 CCNHP51946 323 aaPredicted RBP8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 YPEL5P62699 121 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 ARF5P84085 180 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 ENPEPQ07075 957 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 CCDC15Q0P6D6 951 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 DPYDQ12882 1025 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 MRPL49Q13405 166 aaKnown RBP8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 STK38Q15208 465 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 ELOCQ15369 112 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 NFIL3Q16649 462 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 WSCD2Q2TBF2 565 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 AMZ1Q400G9 498 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 PRR30Q53SZ7 412 aaPredicted RBP8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 TMEM270Q6UE05 265 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 BEND5Q7L4P6 421 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 TMEM135Q86UB9 458 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 ATP6V0D2Q8N8Y2 350 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 GPBAR1Q8TDU6 330 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 APOBEC4Q8WW27 367 aaKnown RBP8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 OR1E3Q8WZA6 343 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 RNF34Q969K3 372 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 RNF31Q96EP0 1072 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 PPP1R16AQ96I34 528 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 RBM15Q96T37 977 aaKnown RBP eCLIP8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 HEPHQ9BQS7 1158 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 ZDHHC6Q9H6R6 413 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 MAGEF1Q9HAY2 307 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 ATP13A2Q9NQ11 1180 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 EXOC1Q9NV70 894 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 ZNF212Q9UDV6 495 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 PILRAQ9UKJ1 303 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 DOLKQ9UPQ8 538 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 COQ6Q9Y2Z9 468 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 COQ4Q9Y3A0 265 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 OR1A2Q9Y585 309 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 KCNMB2Q9Y691 235 aa8.59□□□□□ -1.03
HMGB1P39-201ENST00000366304 AKAP9Q99996 3911 aa8.59□□□□□ -1.04
HMGB1P39-201ENST00000366304 LRP4O75096 1905 aa8.58□□□□□ -1.04
HMGB1P39-201ENST00000366304 SHANK1Q9Y566 2161 aa8.58□□□□□ -1.04
HMGB1P39-201ENST00000366304 B4DGG1 531 aa8.58□□□□□ -1.04
HMGB1P39-201ENST00000366304 E5RJQ4 531 aa8.58□□□□□ -1.04
HMGB1P39-201ENST00000366304 CALUO43852 315 aaPredicted RBP8.58□□□□□ -1.04
HMGB1P39-201ENST00000366304 PPP6R2O75170 966 aa8.58□□□□□ -1.04
HMGB1P39-201ENST00000366304 CLDN11O75508 207 aa8.58□□□□□ -1.04
HMGB1P39-201ENST00000366304 ADCY5O95622 1261 aa8.58□□□□□ -1.04
HMGB1P39-201ENST00000366304 RHOCP08134 193 aa8.58□□□□□ -1.04
HMGB1P39-201ENST00000366304 PAEPP09466 180 aa8.58□□□□□ -1.04
HMGB1P39-201ENST00000366304 ALPIP09923 528 aa8.58□□□□□ -1.04
HMGB1P39-201ENST00000366304 TFE3P19532 575 aaPredicted RBP8.58□□□□□ -1.04
HMGB1P39-201ENST00000366304 CSF2RBP32927 897 aa8.58□□□□□ -1.04
HMGB1P39-201ENST00000366304 SERPINH1P50454 418 aaKnown RBP8.58□□□□□ -1.04
HMGB1P39-201ENST00000366304 DNA2P51530 1060 aa8.58□□□□□ -1.04
HMGB1P39-201ENST00000366304 CDH4P55283 916 aa8.58□□□□□ -1.04
HMGB1P39-201ENST00000366304 MAZP56270 477 aaKnown RBP8.58□□□□□ -1.04
HMGB1P39-201ENST00000366304 SRP54P61011 504 aaKnown RBP8.58□□□□□ -1.04
HMGB1P39-201ENST00000366304 YWHAZP63104 245 aaKnown RBP8.58□□□□□ -1.04
HMGB1P39-201ENST00000366304 ADAM9Q13443 819 aa8.58□□□□□ -1.04
HMGB1P39-201ENST00000366304 CUL4AQ13619 759 aa8.58□□□□□ -1.04
HMGB1P39-201ENST00000366304 KLHL40Q2TBA0 621 aa8.58□□□□□ -1.04
HMGB1P39-201ENST00000366304 EIF2S3LQ2VIR3 472 aaKnown RBP8.58□□□□□ -1.04
HMGB1P39-201ENST00000366304 C8orf34Q49A92 452 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms