RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 ZNF551Q7Z340 670 aaPredicted RBP3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 NUP54Q7Z3B4 507 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 MDGA2Q7Z553 956 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 CAMKMTQ7Z624 323 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 LCA5Q86VQ0 697 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 IQCHQ86VS3 1027 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 MCEMP1Q8IX19 187 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 FUKQ8N0W3 1084 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 SIX6OS1Q8N1H7 587 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 GUF1Q8N442 669 aaKnown RBP3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 EXD3Q8N9H8 876 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 IQUBQ8NA54 791 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 ABHD11Q8NFV4 315 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 CTCFLQ8NI51 663 aaPredicted RBP3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 MYCBPAPQ8TBZ2 947 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 GDPD5Q8WTR4 605 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 TMEM170AQ8WVE7 144 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 TAF4BQ92750 862 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 AK8Q96MA6 479 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 FRG2BQ96QU4 278 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 MYCBPQ99417 103 aaPredicted RBP3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 ATP6V0BQ99437 205 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 AGAP2Q99490 1192 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 EGFL8Q99944 293 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 MLPHQ9BV36 600 aaPredicted RBP3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 TUBB2BQ9BVA1 445 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 NUP85Q9BW27 656 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 IFT27Q9BW83 186 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 ABCG4Q9H172 646 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 MEGF9Q9H1U4 602 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 CYP4F11Q9HBI6 524 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 Q9N2J8 555 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 IL1RAPL2Q9NP60 686 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 MID1IP1Q9NPA3 183 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 GAR1Q9NY12 217 aaKnown RBP3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 GRHL1Q9NZI5 618 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 ZFR2Q9UPR6 939 aaKnown RBP3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 ICKQ9UPZ9 632 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 MAP3K2Q9Y2U5 619 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 FAM96BQ9Y3D0 163 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 MTF2Q9Y483 593 aaPredicted RBP3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 SIRT4Q9Y6E7 314 aaPredicted RBP3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 SPATA31A5Q5VU36 1347 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 SPATA31A6Q5VVP1 1343 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 SPATA31A7Q8IWB4 1347 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 ADGRA2Q96PE1 1338 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 CARMIL2Q6F5E8 1435 aa3.83□□□□□ -1.8
RNU6-1249P-201ENST00000363237 A0A1B0GVM2 712 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 TCAF2A6NFQ2 919 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 OR6C76A6NM76 312 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 NPIPB11E5RHQ5 1161 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 PRYO14603 147 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 ASAP2O43150 1006 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 LAMTOR5O43504 91 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 KIF1CO43896 1103 aaKnown RBP3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 NOBOXO60393 691 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 DIAPH2O60879 1101 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 PPFIA2O75334 1257 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 SEC22BO75396 215 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 TADA2AO75478 443 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 NKX2-2O95096 273 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 MT-CYBP00156 380 aaPredicted RBP3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 RHOP08100 348 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 RFPL3SP0C7P2 107 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 ZFXP17010 805 aaPredicted RBP3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 KRT4P19013 534 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 TNFRSF1AP19438 455 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 HPDP32754 393 aaPredicted RBP3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 MC5RP33032 325 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 CD86P42081 329 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 MATR3P43243 847 aaKnown RBP eCLIP3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 ZNF84P51523 738 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 ARSFP54793 590 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 SLURP1P55000 103 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 TUBB4BP68371 445 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 MRPS35P82673 323 aaKnown RBP3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 PSG6Q00889 435 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 IL1RL1Q01638 556 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 RHAGQ02094 409 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 SLC14A1Q13336 389 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 KCNC3Q14003 757 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 SF3B3Q15393 1217 aaKnown RBP3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 PLK5Q496M5 336 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 ZRANB3Q5FWF4 1079 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 CXorf66Q5JRM2 361 aaPredicted RBP3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 PLAC9Q5JTB6 97 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 VWA1Q6PCB0 445 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 Q6ZRM9 215 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 SEPT14Q6ZU15 432 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 BTN2A1Q7KYR7 527 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 OTOAQ7RTW8 1153 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 SLC9B2Q86UD5 537 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 KLBQ86Z14 1044 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 TMEM151BQ8IW70 566 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 C16orf71Q8IYS4 520 aaPredicted RBP3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 LNX2Q8N448 690 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 PI4KAP1Q8N8J0 262 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 TP53I13Q8NBR0 393 aaPredicted RBP3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 CAMKVQ8NCB2 501 aa3.82□□□□□ -1.8
RNU6-1249P-201ENST00000363237 PTCD3Q96EY7 689 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms