RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 BBS4Q96RK4 519 aa3.91□□□□□ -1.78
RNU6-28P-201ENST00000362378 SIGLEC11Q96RL6 698 aa3.91□□□□□ -1.78
RNU6-28P-201ENST00000362378 MXD3Q9BW11 206 aa3.91□□□□□ -1.78
RNU6-28P-201ENST00000362378 SH2D4AQ9H788 454 aa3.91□□□□□ -1.78
RNU6-28P-201ENST00000362378 MVB12BQ9H7P6 319 aa3.91□□□□□ -1.78
RNU6-28P-201ENST00000362378 THSD1Q9NS62 852 aa3.91□□□□□ -1.78
RNU6-28P-201ENST00000362378 KLHL13Q9P2N7 655 aa3.91□□□□□ -1.78
RNU6-28P-201ENST00000362378 SUCLA2Q9P2R7 463 aaPredicted RBP3.91□□□□□ -1.78
RNU6-28P-201ENST00000362378 PLEKHB1Q9UF11 243 aaPredicted RBP3.91□□□□□ -1.78
RNU6-28P-201ENST00000362378 ZNHIT2Q9UHR6 403 aa3.91□□□□□ -1.78
RNU6-28P-201ENST00000362378 MTMR6Q9Y217 621 aa3.91□□□□□ -1.78
RNU6-28P-201ENST00000362378 KAT6BQ8WYB5 2073 aa3.91□□□□□ -1.78
RNU6-28P-201ENST00000362378 A0A0G2JK05 382 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 A0A0U1RQF3 1178 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 FAM237AA0A1B0GTK4 181 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 SNAP23O00161 211 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 PPP6CO00743 305 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 P4HA2O15460 535 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 TLX3O43711 291 aaPredicted RBP3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 KLK8O60259 260 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 CNOT3O75175 753 aaKnown RBP3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 BEST1O76090 585 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 MMP3P08254 477 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 GABRB1P18505 474 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 ITGAXP20702 1163 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 IL11P20809 199 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 AGAP20933 346 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 MCM3P25205 808 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 KRT20P35900 424 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 CXCR3P49682 368 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 SNX16P57768 344 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 GRIK3Q13003 919 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 KRT24Q2M2I5 525 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 SMTNL2Q2TAL5 461 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 SOWAHCQ53LP3 525 aaPredicted RBP3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 CXorf66Q5JRM2 361 aaPredicted RBP3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 MFSD4BQ5TF39 518 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 ZNF280DQ6N043 979 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 GLDNQ6ZMI3 551 aaPredicted RBP3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 DBX2Q6ZNG2 339 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 PRPF39Q86UA1 669 aaKnown RBP3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 TDRPQ86YL5 185 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 TAGAPQ8N103 731 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 SLC44A5Q8NCS7 719 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 EME1Q96AY2 570 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 CHFRQ96EP1 664 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 CCDC34Q96HJ3 373 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 SIN3AQ96ST3 1273 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 YME1L1Q96TA2 773 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 MAK16Q9BXY0 300 aaKnown RBP3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 NUF2Q9BZD4 464 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 B3GNT4Q9C0J1 378 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 CDT1Q9H211 546 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 R3HDMLQ9H3Y0 253 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 PDZD7Q9H5P4 517 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 AAMDCQ9H7C9 122 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 KIF9Q9HAQ2 790 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 RRP7BPQ9NSQ0 103 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 ANKRD10Q9NXR5 420 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 FLRT1Q9NZU1 646 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 NDRG3Q9UGV2 375 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 RPS6KA6Q9UK32 745 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 AAR2Q9Y312 384 aaKnown RBP3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 RAP2CQ9Y3L5 183 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 LSM4Q9Y4Z0 139 aaKnown RBP3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 SESN1Q9Y6P5 492 aa3.9□□□□□ -1.79
RNU6-28P-201ENST00000362378 SMIM35A0A1B0GVV1 85 aa3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 A0A1W2PQ09 198 aa3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 TYW5A2RUC4 315 aaKnown RBP3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 BTBD18B2RXH4 712 aa3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 HCRTR2O43614 444 aa3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 ERAL1O75616 437 aaKnown RBP3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 ENO3P13929 434 aaPredicted RBP3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 EPHB2P29323 1055 aa3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 HOXA13P31271 388 aaPredicted RBP3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 SHMT1P34896 483 aa3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 RFC1P35251 1148 aaPredicted RBP3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 NNMTP40261 264 aa3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 F2RL1P55085 397 aa3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 TGFB2P61812 414 aa3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 ID2Q02363 134 aa3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 RUNX2Q13950 521 aa3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 DRAP1Q14919 205 aaPredicted RBP3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 TCTN1Q2MV58 587 aa3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 COL28A1Q2UY09 1125 aa3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 C6orf10Q5SRN2 563 aa3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 GKAP1Q5VSY0 366 aaPredicted RBP3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 LRRC8EQ6NSJ5 796 aa3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 TMCO3Q6UWJ1 677 aa3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 LURAP1LQ8IV03 231 aa3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 DENND6AQ8IWF6 608 aa3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 RBFAQ8N0V3 343 aa3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 C17orf53Q8N3J3 647 aaPredicted RBP3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 ZCCHC9Q8N567 271 aaKnown RBP3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 LRRC57Q8N9N7 239 aa3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 GJC3Q8NFK1 279 aa3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 BICD2Q8TD16 824 aa3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 MSI2Q96DH6 328 aaKnown RBP3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 ARHGEF26Q96DR7 871 aa3.89□□□□□ -1.79
RNU6-28P-201ENST00000362378 TMEM68Q96MH6 324 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms