RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 FUT10Q6P4F1 479 aa20.41■□□□□ 0.86
CDC42BPB-201ENST00000361246 KLHL24Q6TFL4 600 aa20.41■□□□□ 0.86
CDC42BPB-201ENST00000361246 DENND6AQ8IWF6 608 aa20.41■□□□□ 0.86
CDC42BPB-201ENST00000361246 NEK7Q8TDX7 302 aa20.41■□□□□ 0.86
CDC42BPB-201ENST00000361246 AARSD1Q9BTE6 412 aaKnown RBP20.41■□□□□ 0.86
CDC42BPB-201ENST00000361246 LMTK2Q8IWU2 1503 aa20.41■□□□□ 0.86
CDC42BPB-201ENST00000361246 DEFA1P59665 94 aa20.41■□□□□ 0.86
CDC42BPB-201ENST00000361246 DEFA3P59666 94 aa20.41■□□□□ 0.86
CDC42BPB-201ENST00000361246 OASLQ15646 514 aaKnown RBP20.41■□□□□ 0.86
CDC42BPB-201ENST00000361246 DNAJB14Q8TBM8 379 aa20.41■□□□□ 0.86
CDC42BPB-201ENST00000361246 GPM6BQ13491 265 aa20.41■□□□□ 0.86
CDC42BPB-201ENST00000361246 VITQ6UXI7 678 aa20.41■□□□□ 0.86
CDC42BPB-201ENST00000361246 ITFG1Q8TB96 612 aa20.41■□□□□ 0.86
CDC42BPB-201ENST00000361246 C6orf62Q9GZU0 229 aaPredicted RBP20.41■□□□□ 0.86
CDC42BPB-201ENST00000361246 HOXA10P31260 410 aaPredicted RBP20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 SLC5A3P53794 718 aa20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 ZNF57Q68EA5 555 aaPredicted RBP20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 FAM45BPQ6NSW5 357 aa20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 SNX32Q86XE0 403 aa20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 HERVK_113Q902F9 699 aa20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 MRASO14807 208 aa20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 SLC28A2O43868 658 aa20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 CCNIQ14094 377 aa20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 TAF5Q15542 800 aa20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 DUSP28Q4G0W2 176 aa20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 UBE2R2Q712K3 238 aaPredicted RBP20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 FAM45AQ8TCE6 357 aa20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 IL22Q9GZX6 179 aa20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 A0A1W2PQ67 120 aa20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 TM9SF1O15321 606 aa20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 PSEN1P49768 467 aa20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 GRSF1Q12849 480 aaKnown RBP eCLIP20.4■□□□□ 0.864e-14■■■□□ 18.2
CDC42BPB-201ENST00000361246 NEDD8Q15843 81 aa20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 INAQ16352 499 aa20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 UNC93AQ86WB7 457 aa20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 PRDM12Q9H4Q4 367 aa20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 TRIM13O60858 407 aa20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 ITGAXP20702 1163 aa20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 ZNF143P52747 638 aaPredicted RBP20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 FKBP1BP68106 108 aa20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 PRCCQ92733 491 aaPredicted RBP20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 KCNMB3Q9NPA1 279 aa20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 A0A0U1RQJ8 604 aa20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 PDE2AO00408 941 aaPredicted RBP20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 MYL12AP19105 171 aa20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 KLHL12Q53G59 568 aa20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 CHST15Q7LFX5 561 aaPredicted RBP20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 TNS4Q8IZW8 715 aa20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 MOSPD2Q8NHP6 518 aa20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 VIPAS39Q9H9C1 493 aa20.4■□□□□ 0.86
CDC42BPB-201ENST00000361246 LTA4HP09960 611 aaKnown RBP20.39■□□□□ 0.86
CDC42BPB-201ENST00000361246 TFEBP19484 476 aa20.39■□□□□ 0.86
CDC42BPB-201ENST00000361246 HDDC3Q8N4P3 179 aa20.39■□□□□ 0.86
CDC42BPB-201ENST00000361246 SNRNP27Q8WVK2 155 aaKnown RBP20.39■□□□□ 0.86
CDC42BPB-201ENST00000361246 SMIM35A0A1B0GVV1 85 aa20.39■□□□□ 0.86
CDC42BPB-201ENST00000361246 PRKCGP05129 697 aa20.39■□□□□ 0.86
CDC42BPB-201ENST00000361246 CCL5P13501 91 aa20.39■□□□□ 0.86
CDC42BPB-201ENST00000361246 LRPAP1P30533 357 aa20.39■□□□□ 0.86
CDC42BPB-201ENST00000361246 MAGEA10P43363 369 aaPredicted RBP20.39■□□□□ 0.86
CDC42BPB-201ENST00000361246 MRGBPQ9NV56 204 aa20.39■□□□□ 0.86
CDC42BPB-201ENST00000361246 A0A0A0MRY4 1105 aa20.39■□□□□ 0.85
CDC42BPB-201ENST00000361246 CPED1A4D0V7 1026 aa20.39■□□□□ 0.85
CDC42BPB-201ENST00000361246 ADSLP30566 484 aaPredicted RBP20.39■□□□□ 0.85
CDC42BPB-201ENST00000361246 DEF8Q6ZN54 512 aa20.39■□□□□ 0.85
CDC42BPB-201ENST00000361246 DHFR2Q86XF0 187 aa20.39■□□□□ 0.85
CDC42BPB-201ENST00000361246 SPATA13Q96N96 652 aa20.39■□□□□ 0.85
CDC42BPB-201ENST00000361246 STK39Q9UEW8 545 aa20.39■□□□□ 0.85
CDC42BPB-201ENST00000361246 DMGDHQ9UI17 866 aaKnown RBP20.39■□□□□ 0.85
CDC42BPB-201ENST00000361246 ATXN2Q99700 1313 aaKnown RBP20.39■□□□□ 0.85
CDC42BPB-201ENST00000361246 URADA6NGE7 173 aa20.39■□□□□ 0.85
CDC42BPB-201ENST00000361246 SLCO1B7G3V0H7 640 aa20.39■□□□□ 0.85
CDC42BPB-201ENST00000361246 TTPAP49638 278 aa20.39■□□□□ 0.85
CDC42BPB-201ENST00000361246 FPGSQ05932 587 aa20.39■□□□□ 0.85
CDC42BPB-201ENST00000361246 RBBP4Q09028 425 aa20.39■□□□□ 0.85
CDC42BPB-201ENST00000361246 KYQ8NBH2 561 aa20.39■□□□□ 0.85
CDC42BPB-201ENST00000361246 FBXO15Q8NCQ5 510 aaPredicted RBP20.39■□□□□ 0.85
CDC42BPB-201ENST00000361246 UPF1Q92900 1129 aaKnown RBP eCLIP20.39■□□□□ 0.85
CDC42BPB-201ENST00000361246 CNPPD1Q9BV87 410 aa20.39■□□□□ 0.85
CDC42BPB-201ENST00000361246 CYP1A1P04798 512 aaPredicted RBP20.39■□□□□ 0.85
CDC42BPB-201ENST00000361246 SERPINE1P05121 402 aa20.39■□□□□ 0.85
CDC42BPB-201ENST00000361246 PTPN20Q4JDL3 420 aa20.39■□□□□ 0.85
CDC42BPB-201ENST00000361246 VGLL2Q8N8G2 317 aa20.39■□□□□ 0.85
CDC42BPB-201ENST00000361246 MKL1Q969V6 931 aa20.39■□□□□ 0.85
CDC42BPB-201ENST00000361246 FAIM2Q9BWQ8 316 aa20.39■□□□□ 0.85
CDC42BPB-201ENST00000361246 NRG1Q02297 640 aaPredicted RBP20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 ZNF557Q8N988 423 aaPredicted RBP20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 SGK2Q9HBY8 427 aa20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 SMIM31A0A1B0GVY4 71 aa20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 HOXC6P09630 235 aa20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 LPOP22079 712 aaPredicted RBP20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 SHC3Q92529 594 aa20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 KCNS3Q9BQ31 491 aa20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 APOC4-APOC2K7ER74 178 aa20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 APOC2P02655 101 aa20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 ERCC2P18074 760 aa20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 CDH3P22223 829 aa20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 MASP1P48740 699 aa20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 SP2Q02086 613 aa20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 TUSC3Q13454 348 aa20.38■□□□□ 0.85
CDC42BPB-201ENST00000361246 RIPOR3Q96MK2 946 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms